RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 STAB1Q9NY15 2570 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 CTXND1A0A1B0GTU2 59 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 NUDT19A8MXV4 375 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 NUPL2O15504 423 aaKnown RBP8.26□□□□□ -1.09
USP11-209ENST00000488848 NDUFS6O75380 124 aaKnown RBP8.26□□□□□ -1.09
USP11-209ENST00000488848 LGALS1P09382 135 aaKnown RBP8.26□□□□□ -1.09
USP11-209ENST00000488848 PF4V1P10720 104 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 PSG1P11464 419 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 ZNF90Q03938 601 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 RELQ04864 619 aaPredicted RBP8.26□□□□□ -1.09
USP11-209ENST00000488848 TCTEX1D4Q5JR98 221 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 FFAR4Q5NUL3 377 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 FAM74A1Q5RGS3 127 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 TMEM182Q6ZP80 229 aaPredicted RBP8.26□□□□□ -1.09
USP11-209ENST00000488848 Q6ZRG5 221 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 OR51G1Q8NGK1 321 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 OR1L4Q8NGR5 311 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 RCC1LQ96I51 464 aaKnown RBP8.26□□□□□ -1.09
USP11-209ENST00000488848 CHRDL1Q9BU40 450 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 ZFAND3Q9H8U3 227 aa8.26□□□□□ -1.09
USP11-209ENST00000488848 MRPL27Q9P0M9 148 aaKnown RBP8.26□□□□□ -1.09
USP11-209ENST00000488848 LINC00862A6NCI5 91 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 I3L521 148 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 NDUFA4O00483 81 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 IGHV3-48P01763 117 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 CLEC3BP05452 202 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 STAG3L2P0CL84 134 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 STAG3L3P0CL85 134 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 RD3LP0DJH9 198 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 GPR183P32249 361 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 RAB2AP61019 212 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 ZNF616Q08AN1 781 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 ZNF726P1Q15940 193 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 TIGITQ495A1 244 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 Q56UQ5 140 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 S100A7AQ86SG5 101 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 ZNF329Q86UD4 541 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 OR4X2Q8NGF9 303 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 SUN5Q8TC36 379 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 C4orf3Q8WVX3 66 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 TMEM37Q8WXS4 190 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 TMEM190Q8WZ59 177 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 RNF125Q96EQ8 232 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 MS4A10Q96PG2 267 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 DNAJC4Q9NNZ3 241 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 ZNF355PQ9NSJ1 428 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 RNF24Q9Y225 148 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 RFNGQ9Y644 331 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 ARL2-SNX15V9GYD0 113 aa8.25□□□□□ -1.09
USP11-209ENST00000488848 IGHV3-21A0A0B4J1V1 117 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 OR2T8A6NH00 312 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 ZNF705EA8MWA4 302 aaPredicted RBP8.24□□□□□ -1.09
USP11-209ENST00000488848 BMPR1BO00238 502 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 HBE1P02100 147 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 RPLP1P05386 114 aaKnown RBP8.24□□□□□ -1.09
USP11-209ENST00000488848 RAB14P61106 215 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 RHOBP62745 196 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 C10orf99Q6UWK7 81 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 PATE2Q6UY27 113 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 GPHB5Q86YW7 130 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 EIF4E3Q8N5X7 224 aaKnown RBP8.24□□□□□ -1.09
USP11-209ENST00000488848 OR5AU1Q8NGC0 362 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 OR10G4Q8NGN3 311 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 OR10G9Q8NGN4 311 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 OR10G7Q8NGN6 311 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 Q8WTZ3 238 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 ACTR3CQ9C0K3 210 aaPredicted RBP8.24□□□□□ -1.09
USP11-209ENST00000488848 VSIRQ9H7M9 311 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 PEF1Q9UBV8 284 aaKnown RBP8.24□□□□□ -1.09
USP11-209ENST00000488848 FUT9Q9Y231 359 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 U3KQE9 123 aa8.24□□□□□ -1.09
USP11-209ENST00000488848 FBN1P35555 2871 aaKnown RBP8.23□□□□□ -1.09
USP11-209ENST00000488848 A8MWP6 167 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 LGALS9O00182 355 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 GGCTO75223 188 aaKnown RBP8.23□□□□□ -1.09
USP11-209ENST00000488848 HYPMO75409 117 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 S100A7P31151 101 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 ARL3P36405 182 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 CDC34P49427 236 aaPredicted RBP8.23□□□□□ -1.09
USP11-209ENST00000488848 FHITP49789 147 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 ELLP55199 621 aaPredicted RBP8.23□□□□□ -1.09
USP11-209ENST00000488848 FHL3Q13643 280 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 NDUFA5Q16718 116 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 GCSAMLQ5JQS6 135 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 CLEC19AQ6UXS0 136 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 IL34Q6ZMJ4 242 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 REC114Q7Z4M0 266 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 STXBP6Q8NFX7 210 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 FAM167A-AS1Q96KT0 104 aa8.23□□□□□ -1.09
USP11-209ENST00000488848 SEPSECSQ9HD40 501 aaKnown RBP8.23□□□□□ -1.09
USP11-209ENST00000488848 ANKRD34BA5PLL1 514 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 H3BRN7 92 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 K7EMT4 169 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 H2AFB1P0C5Y9 115 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 GATA2P23769 480 aaPredicted RBP8.22□□□□□ -1.09
USP11-209ENST00000488848 CRYBB3P26998 211 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 DEFA5Q01523 94 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 FOXL1Q12952 345 aa8.22□□□□□ -1.09
USP11-209ENST00000488848 USF2Q15853 346 aaPredicted RBP8.22□□□□□ -1.09
USP11-209ENST00000488848 TOMM20LQ6UXN7 152 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms