RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 MUC7Q8TAX7 377 aa11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 GLMPQ8WWB7 406 aa11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 SEC22CQ9BRL7 303 aa11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 PAIP2BQ9ULR5 123 aaKnown RBP11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 KMT2CQ8NEZ4 4911 aaKnown RBP11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 DNAH7Q8WXX0 4024 aa11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 FAM240BA0A1B0GVZ2 78 aa11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 ZFP92A6NM28 416 aa11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 C3orf84H3BNL1 204 aa11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 H3BP45 60 aa11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 BUB3O43684 328 aa11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 RPL11P62913 178 aaKnown RBP11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 ZNF846Q147U1 533 aa11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 ZNF431Q8TF32 576 aaPredicted RBP11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 DCANP1Q8TF63 244 aa11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 SMIM8Q96KF7 97 aa11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 TRGV9Q99603 122 aa11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 OVOL2Q9BRP0 275 aa11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 WDR12Q9GZL7 423 aaKnown RBP11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 BATF3Q9NR55 127 aa11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 STRAPQ9Y3F4 350 aaKnown RBP11.78□□□□□ -0.52
CTDSP1-209ENST00000488627 KIR2DL5BA0A0G2JN68 375 aa11.77□□□□□ -0.53
CTDSP1-209ENST00000488627 KIR2DL5BA0A0G2JPC4 375 aa11.77□□□□□ -0.53
CTDSP1-209ENST00000488627 K7EQG2 157 aa11.77□□□□□ -0.53
CTDSP1-209ENST00000488627 DNASE2O00115 360 aaPredicted RBP11.77□□□□□ -0.53
CTDSP1-209ENST00000488627 SSSCA1O60232 199 aa11.77□□□□□ -0.53
CTDSP1-209ENST00000488627 MZT2BQ6NZ67 158 aa11.77□□□□□ -0.53
CTDSP1-209ENST00000488627 KIR2DL5AQ8N109 375 aa11.77□□□□□ -0.53
CTDSP1-209ENST00000488627 STPG3Q8N7X2 389 aa11.77□□□□□ -0.53
CTDSP1-209ENST00000488627 KIR2DL5BQ8NHK3 375 aa11.77□□□□□ -0.53
CTDSP1-209ENST00000488627 RNF125Q96EQ8 232 aa11.77□□□□□ -0.53
CTDSP1-209ENST00000488627 NARS2Q96I59 477 aaKnown RBP11.77□□□□□ -0.53
CTDSP1-209ENST00000488627 PSENENQ9NZ42 101 aa11.77□□□□□ -0.53
CTDSP1-209ENST00000488627 GSKIPQ9P0R6 139 aa11.77□□□□□ -0.53
CTDSP1-209ENST00000488627 CCSO14618 274 aa11.76□□□□□ -0.53
CTDSP1-209ENST00000488627 MBPP02686 304 aaPredicted RBP11.76□□□□□ -0.53
CTDSP1-209ENST00000488627 RPL35AP18077 110 aaKnown RBP11.76□□□□□ -0.53
CTDSP1-209ENST00000488627 DEFB131AP59861 70 aa11.76□□□□□ -0.53
CTDSP1-209ENST00000488627 TMEM14EPQ6UXP3 125 aa11.76□□□□□ -0.53
CTDSP1-209ENST00000488627 GRAMD2BQ96HH9 432 aa11.76□□□□□ -0.53
CTDSP1-209ENST00000488627 RABAC1Q9UI14 185 aa11.76□□□□□ -0.53
CTDSP1-209ENST00000488627 RCL1Q9Y2P8 373 aaKnown RBP11.76□□□□□ -0.53
CTDSP1-209ENST00000488627 SNRPGP15A8MWD9 76 aa11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 UBE2CO00762 179 aa11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 CCNKO75909 580 aa11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 IL5P05113 134 aa11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 EIF2B2P49770 351 aaKnown RBP11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 APOC4P55056 127 aa11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 TAS2R30P59541 319 aa11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 OR2F1Q13607 317 aa11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 OR8G2PQ6IF36 304 aa11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 TMEM182Q6ZP80 229 aaPredicted RBP11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 ACOT7LQ6ZUV0 252 aa11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 Q6ZWC4 215 aa11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 C12orf45Q8N5I9 185 aaPredicted RBP11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 STXBP6Q8NFX7 210 aa11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 RAB40CQ96S21 281 aa11.75□□□□□ -0.53
CTDSP1-209ENST00000488627 C7orf66A4D0T2 115 aa11.74□□□□□ -0.53
CTDSP1-209ENST00000488627 HELTA6NFD8 242 aa11.74□□□□□ -0.53
CTDSP1-209ENST00000488627 SCGB1D2O95969 90 aa11.74□□□□□ -0.53
CTDSP1-209ENST00000488627 AP2S1P53680 142 aaPredicted RBP11.74□□□□□ -0.53
CTDSP1-209ENST00000488627 IL15RAQ13261 267 aa11.74□□□□□ -0.53
CTDSP1-209ENST00000488627 CASC10Q5T4H9 136 aa11.74□□□□□ -0.53
CTDSP1-209ENST00000488627 TMEM144Q7Z5S9 345 aa11.74□□□□□ -0.53
CTDSP1-209ENST00000488627 PBDC1Q9BVG4 233 aa11.74□□□□□ -0.53
CTDSP1-209ENST00000488627 C11orf1Q9H5F2 150 aa11.74□□□□□ -0.53
CTDSP1-209ENST00000488627 TSC22D2O75157 780 aa11.73□□□□□ -0.53
CTDSP1-209ENST00000488627 FABP1P07148 127 aa11.73□□□□□ -0.53
CTDSP1-209ENST00000488627 METTL15P1P0C7V9 234 aa11.73□□□□□ -0.53
CTDSP1-209ENST00000488627 LYZP61626 148 aa11.73□□□□□ -0.53
CTDSP1-209ENST00000488627 ARL16Q0P5N6 197 aa11.73□□□□□ -0.53
CTDSP1-209ENST00000488627 LEMD1Q68G75 181 aa11.73□□□□□ -0.53
CTDSP1-209ENST00000488627 TP53TG1Q9Y2A0 90 aa11.73□□□□□ -0.53
CTDSP1-209ENST00000488627 FAM25EA8MYX2 175 aa11.72□□□□□ -0.53
CTDSP1-209ENST00000488627 ZNF688P0C7X2 276 aa11.72□□□□□ -0.53
CTDSP1-209ENST00000488627 LYL1P12980 280 aa11.72□□□□□ -0.53
CTDSP1-209ENST00000488627 GATA2P23769 480 aaPredicted RBP11.72□□□□□ -0.53
CTDSP1-209ENST00000488627 SIGLEC15Q6ZMC9 328 aa11.72□□□□□ -0.53
CTDSP1-209ENST00000488627 NRARPQ7Z6K4 114 aa11.72□□□□□ -0.53
CTDSP1-209ENST00000488627 RNF183Q96D59 192 aa11.72□□□□□ -0.53
CTDSP1-209ENST00000488627 C2orf50Q96LR7 162 aa11.72□□□□□ -0.53
CTDSP1-209ENST00000488627 CSTL1Q9H114 145 aa11.72□□□□□ -0.53
CTDSP1-209ENST00000488627 C5orf51A6NDU8 294 aa11.71□□□□□ -0.53
CTDSP1-209ENST00000488627 K7EPK0 472 aa11.71□□□□□ -0.53
CTDSP1-209ENST00000488627 SPRY2O43597 315 aa11.71□□□□□ -0.53
CTDSP1-209ENST00000488627 CFDP00746 253 aaPredicted RBP11.71□□□□□ -0.53
CTDSP1-209ENST00000488627 DLK1P80370 383 aa11.71□□□□□ -0.53
CTDSP1-209ENST00000488627 AKR1C1Q04828 323 aa11.71□□□□□ -0.53
CTDSP1-209ENST00000488627 DEFB135Q30KP9 77 aa11.71□□□□□ -0.53
CTDSP1-209ENST00000488627 C1orf194Q5T5A4 169 aa11.71□□□□□ -0.53
CTDSP1-209ENST00000488627 ENKURQ8TC29 256 aa11.71□□□□□ -0.53
CTDSP1-209ENST00000488627 NRN1Q9NPD7 142 aa11.71□□□□□ -0.53
CTDSP1-209ENST00000488627 FNDC10F2Z333 226 aa11.7□□□□□ -0.54
CTDSP1-209ENST00000488627 NUP62P37198 522 aaPredicted RBP11.7□□□□□ -0.54
CTDSP1-209ENST00000488627 RRAS2P62070 204 aaPredicted RBP11.7□□□□□ -0.54
CTDSP1-209ENST00000488627 OR10P1Q8NGE3 313 aa11.7□□□□□ -0.54
CTDSP1-209ENST00000488627 SEPSECSQ9HD40 501 aaKnown RBP11.7□□□□□ -0.54
CTDSP1-209ENST00000488627 PFDN2Q9UHV9 154 aa11.7□□□□□ -0.54
CTDSP1-209ENST00000488627 KNCNA6PVL3 124 aa11.69□□□□□ -0.54
CTDSP1-209ENST00000488627 GIG44P09565 113 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms