RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 A0A1W2PS18 150 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 CFDP00746 253 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-219ENST00000488186 C8orf88P0DMB2 117 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 PSG1P11464 419 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 NUP62P37198 522 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-219ENST00000488186 RAP2BP61225 183 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 DEFA6Q01524 100 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 RAB31Q13636 194 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 DEFB114Q30KQ6 69 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 TEPPQ6URK8 271 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 BTNL8Q6UX41 500 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 BPIFCQ8NFQ6 507 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 RNF126Q9BV68 326 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 TMEM231Q9H6L2 316 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 UQCC1Q9NVA1 299 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 MBD2Q9UBB5 411 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 SMPXQ9UHP9 88 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 PFDN2Q9UHV9 154 aa11.93□□□□□ -0.5
C9orf3-219ENST00000488186 ZNF256Q9Y2P7 627 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-219ENST00000488186 IGKV1D-37A0A075B6S9 117 aa11.92□□□□□ -0.5
C9orf3-219ENST00000488186 KRTAP10-11P60412 298 aa11.92□□□□□ -0.5
C9orf3-219ENST00000488186 LYZP61626 148 aa11.92□□□□□ -0.5
C9orf3-219ENST00000488186 EWSR1Q01844 656 aaKnown RBP eCLIP11.92□□□□□ -0.5
C9orf3-219ENST00000488186 NHLH2Q02577 135 aa11.92□□□□□ -0.5
C9orf3-219ENST00000488186 BAXQ07812 192 aa11.92□□□□□ -0.5
C9orf3-219ENST00000488186 GUCA2BQ16661 112 aa11.92□□□□□ -0.5
C9orf3-219ENST00000488186 CD300EQ496F6 205 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-219ENST00000488186 ADAMTSL5Q6ZMM2 481 aa11.92□□□□□ -0.5
C9orf3-219ENST00000488186 GRAMD2BQ96HH9 432 aa11.92□□□□□ -0.5
C9orf3-219ENST00000488186 RHPN1-AS1Q9BWJ2 59 aa11.92□□□□□ -0.5
C9orf3-219ENST00000488186 MLXQ9UH92 298 aa11.92□□□□□ -0.5
C9orf3-219ENST00000488186 RABAC1Q9UI14 185 aa11.92□□□□□ -0.5
C9orf3-219ENST00000488186 SELENOKQ9Y6D0 94 aa11.92□□□□□ -0.5
C9orf3-219ENST00000488186 IGHV3OR16-13A0A075B7E8 117 aa11.91□□□□□ -0.5
C9orf3-219ENST00000488186 IGHV3-74A0A0B4J1X5 117 aa11.91□□□□□ -0.5
C9orf3-219ENST00000488186 PRB2P02812 416 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-219ENST00000488186 HNRNPCP07910 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
C9orf3-219ENST00000488186 GP9P14770 177 aa11.91□□□□□ -0.5
C9orf3-219ENST00000488186 RPL12P30050 165 aaKnown RBP11.91□□□□□ -0.5
C9orf3-219ENST00000488186 CYP2G1PQ6ZSU1 146 aa11.91□□□□□ -0.5
C9orf3-219ENST00000488186 PPP1R14BQ96C90 147 aa11.91□□□□□ -0.5
C9orf3-219ENST00000488186 RNF125Q96EQ8 232 aa11.91□□□□□ -0.5
C9orf3-219ENST00000488186 TMEM147Q9BVK8 224 aa11.91□□□□□ -0.5
C9orf3-219ENST00000488186 IGKV1OR2-108A0A075B7D4 117 aa11.9□□□□□ -0.5
C9orf3-219ENST00000488186 IGHV3-66A0A0C4DH42 116 aa11.9□□□□□ -0.5
C9orf3-219ENST00000488186 CHEK1O14757 476 aa11.9□□□□□ -0.5
C9orf3-219ENST00000488186 S100A7P31151 101 aa11.9□□□□□ -0.5
C9orf3-219ENST00000488186 SELENOTP62341 195 aa11.9□□□□□ -0.5
C9orf3-219ENST00000488186 RPL11P62913 178 aaKnown RBP11.9□□□□□ -0.5
C9orf3-219ENST00000488186 OR5C1Q8NGR4 320 aa11.9□□□□□ -0.5
C9orf3-219ENST00000488186 OR2T35Q8NGX2 323 aa11.9□□□□□ -0.5
C9orf3-219ENST00000488186 PRR25Q96S07 402 aa11.9□□□□□ -0.5
C9orf3-219ENST00000488186 AURKAIP1Q9NWT8 199 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-219ENST00000488186 TRAV25A0A0B4J276 109 aa11.89□□□□□ -0.51
C9orf3-219ENST00000488186 UBE2L5PA0A1B0GUS4 154 aa11.89□□□□□ -0.51
C9orf3-219ENST00000488186 WI2-2373I1.2A0A1W2PRP0 233 aa11.89□□□□□ -0.51
C9orf3-219ENST00000488186 CD5P06127 495 aa11.89□□□□□ -0.51
C9orf3-219ENST00000488186 ORM2P19652 201 aa11.89□□□□□ -0.51
C9orf3-219ENST00000488186 CRYBB3P26998 211 aa11.89□□□□□ -0.51
C9orf3-219ENST00000488186 CLINT1Q14677 625 aa11.89□□□□□ -0.51
C9orf3-219ENST00000488186 ST8SIA2Q92186 375 aa11.89□□□□□ -0.51
C9orf3-219ENST00000488186 ZNF414Q96IQ9 312 aa11.89□□□□□ -0.51
C9orf3-219ENST00000488186 IZUMO1RA6ND01 250 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 AGPAT2O15120 278 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 LYL1P12980 280 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 FGF7P21781 194 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 GATA2P23769 480 aaPredicted RBP11.88□□□□□ -0.51
C9orf3-219ENST00000488186 CAMLGP49069 296 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 EIF2B2P49770 351 aaKnown RBP11.88□□□□□ -0.51
C9orf3-219ENST00000488186 PAFAH1B2P68402 229 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 USF2Q15853 346 aaPredicted RBP11.88□□□□□ -0.51
C9orf3-219ENST00000488186 DEFB121Q5J5C9 76 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 S100A7AQ86SG5 101 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 ZNF546Q86UE3 836 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 GTSCR1Q86UQ5 136 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 TMEM61Q8N0U2 210 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 INO80EQ8NBZ0 244 aaPredicted RBP11.88□□□□□ -0.51
C9orf3-219ENST00000488186 OR1B1Q8NGR6 318 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 RNF2Q99496 336 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 HSPB11Q9Y547 144 aa11.88□□□□□ -0.51
C9orf3-219ENST00000488186 IGKV3-7A0A075B6H7 116 aa11.87□□□□□ -0.51
C9orf3-219ENST00000488186 FXYD6-FXYD2A0A087WZ82 144 aa11.87□□□□□ -0.51
C9orf3-219ENST00000488186 DFFBO76075 338 aa11.87□□□□□ -0.51
C9orf3-219ENST00000488186 APOHP02749 345 aaPredicted RBP11.87□□□□□ -0.51
C9orf3-219ENST00000488186 Q6ZNX1 250 aa11.87□□□□□ -0.51
C9orf3-219ENST00000488186 TCF24Q7RTU0 167 aa11.87□□□□□ -0.51
C9orf3-219ENST00000488186 SMIM3Q9BZL3 60 aa11.87□□□□□ -0.51
C9orf3-219ENST00000488186 VSIRQ9H7M9 311 aa11.87□□□□□ -0.51
C9orf3-219ENST00000488186 WDR83OSQ9Y284 106 aa11.87□□□□□ -0.51
C9orf3-219ENST00000488186 PRKDCP78527 4128 aaKnown RBP11.86□□□□□ -0.51
C9orf3-219ENST00000488186 DNASE2O00115 360 aaPredicted RBP11.86□□□□□ -0.51
C9orf3-219ENST00000488186 HYPMO75409 117 aa11.86□□□□□ -0.51
C9orf3-219ENST00000488186 IFNA5P01569 189 aa11.86□□□□□ -0.51
C9orf3-219ENST00000488186 OR5G3P0C626 314 aa11.86□□□□□ -0.51
C9orf3-219ENST00000488186 LINC00869P0C866 280 aa11.86□□□□□ -0.51
C9orf3-219ENST00000488186 VWC2Q2TAL6 325 aa11.86□□□□□ -0.51
C9orf3-219ENST00000488186 Q5BKY6 102 aa11.86□□□□□ -0.51
C9orf3-219ENST00000488186 TMEM182Q6ZP80 229 aaPredicted RBP11.86□□□□□ -0.51
C9orf3-219ENST00000488186 Q6ZRG5 221 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms