RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 CSTL1Q9H114 145 aa11.05□□□□□ -0.64
COPS7B-221ENST00000488111 ARL2-SNX15V9GYD0 113 aa11.05□□□□□ -0.64
COPS7B-221ENST00000488111 KBTBD11-OT1A0A1B0GTJ5 212 aa11.05□□□□□ -0.64
COPS7B-221ENST00000488111 FAM181BA6NEQ2 426 aa11.05□□□□□ -0.64
COPS7B-221ENST00000488111 TAX1BP3O14907 124 aa11.05□□□□□ -0.64
COPS7B-221ENST00000488111 APCSP02743 223 aa11.05□□□□□ -0.64
COPS7B-221ENST00000488111 LINC00869P0C866 280 aa11.05□□□□□ -0.64
COPS7B-221ENST00000488111 GNG4P50150 75 aa11.05□□□□□ -0.64
COPS7B-221ENST00000488111 TRAT1Q6PIZ9 186 aa11.05□□□□□ -0.64
COPS7B-221ENST00000488111 CLEC2AQ6UVW9 174 aa11.05□□□□□ -0.64
COPS7B-221ENST00000488111 SMIM27A0A1W2PRY6 76 aa11.04□□□□□ -0.64
COPS7B-221ENST00000488111 PRAMEF5Q5TYX0 476 aa11.04□□□□□ -0.64
COPS7B-221ENST00000488111 SPATA31B1PQ5VZV4 182 aa11.04□□□□□ -0.64
COPS7B-221ENST00000488111 EBLN2Q6P2I7 272 aa11.04□□□□□ -0.64
COPS7B-221ENST00000488111 FAM168AQ92567 244 aa11.04□□□□□ -0.64
COPS7B-221ENST00000488111 NINJ1Q92982 152 aa11.04□□□□□ -0.64
COPS7B-221ENST00000488111 GNG12Q9UBI6 72 aa11.04□□□□□ -0.64
COPS7B-221ENST00000488111 LINC00312Q9Y6C7 94 aa11.04□□□□□ -0.64
COPS7B-221ENST00000488111 PTPN13Q12923 2485 aa11.04□□□□□ -0.64
COPS7B-221ENST00000488111 ISLRO14498 428 aa11.04□□□□□ -0.64
COPS7B-221ENST00000488111 MEF2CQ06413 473 aaPredicted RBP11.04□□□□□ -0.64
COPS7B-221ENST00000488111 RNASE7Q9H1E1 156 aaKnown RBP11.04□□□□□ -0.64
COPS7B-221ENST00000488111 RNF24Q9Y225 148 aa11.04□□□□□ -0.64
COPS7B-221ENST00000488111 LSM4Q9Y4Z0 139 aaKnown RBP11.04□□□□□ -0.64
COPS7B-221ENST00000488111 POLQO75417 2590 aa11.04□□□□□ -0.64
COPS7B-221ENST00000488111 MALRD1Q5VYJ5 2156 aa11.04□□□□□ -0.64
COPS7B-221ENST00000488111 PSG1P11464 419 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 LOXL3P58215 753 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 SLC35B1P78383 322 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 TNXAQ16473 311 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 MRPL54Q6P161 138 aaKnown RBP11.03□□□□□ -0.64
COPS7B-221ENST00000488111 C1orf159Q96HA4 380 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 ZNF714Q96N38 554 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 SEPSECSQ9HD40 501 aaKnown RBP11.03□□□□□ -0.64
COPS7B-221ENST00000488111 HELTA6NFD8 242 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 C2orf70A6NJV1 201 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 FOXH1O75593 365 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 OR9G9P0C7N8 305 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 DLX1P56177 255 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 TCL1AP56279 114 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 UBE2G1P62253 170 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 RELBQ01201 579 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 KLF5Q13887 457 aaPredicted RBP11.03□□□□□ -0.64
COPS7B-221ENST00000488111 FXYD3Q14802 87 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 Q56UQ5 140 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 PQLC2Q6ZP29 291 aa11.03□□□□□ -0.64
COPS7B-221ENST00000488111 SSBP3Q9BWW4 388 aaPredicted RBP11.03□□□□□ -0.64
COPS7B-221ENST00000488111 IGHV4-30-2A0A087WSY4 118 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 IZUMO1RA6ND01 250 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 C22orf46C9J442 243 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 F2RL2O00254 374 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 PRB3Q04118 309 aaPredicted RBP11.02□□□□□ -0.65
COPS7B-221ENST00000488111 SLAQ13239 276 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 C10orf105Q8TEF2 133 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 WIPF2Q8TF74 440 aaPredicted RBP11.02□□□□□ -0.65
COPS7B-221ENST00000488111 IDI2-AS1Q9NZ38 188 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 RPUSD1Q9UJJ7 312 aaKnown RBP11.02□□□□□ -0.65
COPS7B-221ENST00000488111 ABCA12Q86UK0 2595 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 PPIAL4CA0A0B4J2A2 164 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 PPIAL4GP0DN37 164 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 ZFP36P26651 326 aaKnown RBP11.02□□□□□ -0.65
COPS7B-221ENST00000488111 VDAC2P45880 294 aaPredicted RBP11.02□□□□□ -0.65
COPS7B-221ENST00000488111 ZNF134P52741 427 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 TMEM95Q3KNT9 176 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 CFAP161Q6P656 301 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 RASL11AQ6T310 242 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 DEFB125Q8N687 156 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 PIMREGQ9BSJ6 248 aa11.02□□□□□ -0.65
COPS7B-221ENST00000488111 TECRQ9NZ01 308 aaKnown RBP11.02□□□□□ -0.65
COPS7B-221ENST00000488111 CHTOPQ9Y3Y2 248 aaKnown RBP11.02□□□□□ -0.65
COPS7B-221ENST00000488111 FASNP49327 2511 aaKnown RBP11.01□□□□□ -0.65
COPS7B-221ENST00000488111 FAM90A9PA6NNJ1 464 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 LINC00473A8K010 186 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 HSBP1O75506 76 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 IGLV2-8P01709 118 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 USF1P22415 310 aaPredicted RBP11.01□□□□□ -0.65
COPS7B-221ENST00000488111 TIGITQ495A1 244 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 MPV17L2Q567V2 206 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 BVES-AS1Q5T3Y7 98 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 SPATA12Q7Z6I5 190 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 SSMEM1Q8WWF3 244 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 ST20Q9HBF5 79 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 JPT1Q9UK76 154 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 PSG11Q9UQ72 335 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 DSCAML1Q8TD84 2053 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 IGHV4-61A0A0C4DH41 118 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 M0R2Z0 102 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 TOX4O94842 621 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 CRYBB3P26998 211 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 LMO4P61968 165 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 OR4A47Q6IF82 309 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 ERASQ7Z444 233 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 C1RLQ9NZP8 487 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 ZNRD1Q9P1U0 126 aa11.01□□□□□ -0.65
COPS7B-221ENST00000488111 ARHGAP32A7KAX9 2087 aa11□□□□□ -0.65
COPS7B-221ENST00000488111 J3QR06 171 aa11□□□□□ -0.65
COPS7B-221ENST00000488111 DLX6P56179 175 aa11□□□□□ -0.65
COPS7B-221ENST00000488111 STPG3Q8N7X2 389 aa11□□□□□ -0.65
COPS7B-221ENST00000488111 NPVFQ9HCQ7 196 aa11□□□□□ -0.65
COPS7B-221ENST00000488111 ZNF331Q9NQX6 463 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms