RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 METTL15P1P0C7V9 234 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 PSG1P11464 419 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 NPPCP23582 126 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 AP2S1P53680 142 aaPredicted RBP5.02□□□□□ -1.61
PTPRE-209ENST00000487428 CMC4P56277 68 aaPredicted RBP5.02□□□□□ -1.61
PTPRE-209ENST00000487428 ARL16Q0P5N6 197 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 FCN2Q15485 313 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 TM4SF20Q53R12 229 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 LAMTOR1Q6IAA8 161 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 C11orf87Q6NUJ2 197 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 UBAC2Q8NBM4 344 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 AQP10Q96PS8 301 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 METTL26Q96S19 204 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 NEURL2Q9BR09 285 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 TMEM147Q9BVK8 224 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 WDR83OSQ9Y284 106 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 LSM5Q9Y4Y9 91 aaKnown RBP5.02□□□□□ -1.61
PTPRE-209ENST00000487428 IGHV3-21A0A0B4J1V1 117 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 IGSF23A1L1A6 192 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 ZNF320A2RRD8 509 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 FAM24AA6NFZ4 105 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 ZFP92A6NM28 416 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 BUB3O43684 328 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 DFFBO76075 338 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 SIX6O95475 246 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 IGHV3-48P01763 117 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 HNRNPCP07910 306 aaKnown RBP eCLIP5.01□□□□□ -1.61
PTPRE-209ENST00000487428 GP9P14770 177 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 RPL29P47914 159 aaKnown RBP5.01□□□□□ -1.61
PTPRE-209ENST00000487428 EIF2B2P49770 351 aaKnown RBP5.01□□□□□ -1.61
PTPRE-209ENST00000487428 CAV2P51636 162 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 KRTAP10-11P60412 298 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 PRR20EP86478 221 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 PRR20CP86479 221 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 PRR20DP86480 221 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 PRR20BP86481 221 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 PRR20AP86496 221 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 EWSR1Q01844 656 aaKnown RBP eCLIP5.01□□□□□ -1.61
PTPRE-209ENST00000487428 SLC38A11Q08AI6 406 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 RAB31Q13636 194 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 TIGITQ495A1 244 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 CD300EQ496F6 205 aaPredicted RBP5.01□□□□□ -1.61
PTPRE-209ENST00000487428 SAMD13Q5VXD3 122 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 Q6ZNX1 250 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 ZNF546Q86UE3 836 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 TMEM61Q8N0U2 210 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 BPIFCQ8NFQ6 507 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 THAP6Q8TBB0 222 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 RNF125Q96EQ8 232 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 ACY3Q96HD9 319 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 GRAMD2BQ96HH9 432 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 NARS2Q96I59 477 aaKnown RBP5.01□□□□□ -1.61
PTPRE-209ENST00000487428 GPR82Q96P67 336 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 RHPN1-AS1Q9BWJ2 59 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 UQCC1Q9NVA1 299 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 AURKAIP1Q9NWT8 199 aaPredicted RBP5.01□□□□□ -1.61
PTPRE-209ENST00000487428 OR5AC2Q9NZP5 309 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 FBXL17Q9UF56 701 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 MLXQ9UH92 298 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 AGRNO00468 2067 aa5.01□□□□□ -1.61
PTPRE-209ENST00000487428 ELOA3CA0A087WX78 387 aaPredicted RBP5□□□□□ -1.61
PTPRE-209ENST00000487428 HELTA6NFD8 242 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 G3V3Q6 166 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 CCNKO75909 580 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 IL4P05112 153 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 MEOX2P50222 304 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 BCAP31P51572 246 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 S100A10P60903 97 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 ZNF90Q03938 601 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 AKR1C1Q04828 323 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 ZNF345Q14585 488 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 OPCMLQ14982 345 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 USF2Q15853 346 aaPredicted RBP5□□□□□ -1.61
PTPRE-209ENST00000487428 C16orf54Q6UWD8 224 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 CYP2G1PQ6ZSU1 146 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 Q8N1Y9 231 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 DYNLRB2Q8TF09 96 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 GLMPQ8WWB7 406 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 KCNIP2Q9NS61 270 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 MBD2Q9UBB5 411 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 RABAC1Q9UI14 185 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 HSPB11Q9Y547 144 aa5□□□□□ -1.61
PTPRE-209ENST00000487428 IGHV3-35A0A0C4DH35 117 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 OR4C46A6NHA9 309 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 HMSDA8MTL9 139 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 K7EIL1 84 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 AGPAT2O15120 278 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 CST7O76096 145 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 YIF1AO95070 293 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 RPL12P30050 165 aaKnown RBP4.99□□□□□ -1.61
PTPRE-209ENST00000487428 NHLH2Q02577 135 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 BTNL8Q6UX41 500 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 LINC00322Q6ZN03 302 aaPredicted RBP4.99□□□□□ -1.61
PTPRE-209ENST00000487428 RBPMS2Q6ZRY4 209 aaKnown RBP4.99□□□□□ -1.61
PTPRE-209ENST00000487428 GTSCR1Q86UQ5 136 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 LILRB2Q8N423 598 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 OR5C1Q8NGR4 320 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 DCANP1Q8TF63 244 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 GATAD1Q8WUU5 269 aa4.99□□□□□ -1.61
PTPRE-209ENST00000487428 WDR89Q96FK6 387 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms