RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 OR1L4Q8NGR5 311 aa11.11□□□□□ -0.63
CUX1-209ENST00000487284 ZNF418Q8TF45 676 aaPredicted RBP11.11□□□□□ -0.63
CUX1-209ENST00000487284 TMEM37Q8WXS4 190 aa11.11□□□□□ -0.63
CUX1-209ENST00000487284 DNAJC4Q9NNZ3 241 aa11.11□□□□□ -0.63
CUX1-209ENST00000487284 M0QZK8 103 aa11.11□□□□□ -0.63
CUX1-209ENST00000487284 SNAPINO95295 136 aa11.11□□□□□ -0.63
CUX1-209ENST00000487284 HIST1H1BP16401 226 aaKnown RBP11.11□□□□□ -0.63
CUX1-209ENST00000487284 GCHFRP30047 84 aa11.11□□□□□ -0.63
CUX1-209ENST00000487284 AKIRIN2Q53H80 203 aa11.11□□□□□ -0.63
CUX1-209ENST00000487284 C19orf54Q5BKX5 351 aa11.11□□□□□ -0.63
CUX1-209ENST00000487284 UNQ5815/PRO19632Q6UWF5 114 aa11.11□□□□□ -0.63
CUX1-209ENST00000487284 OR5T1Q8NG75 326 aa11.11□□□□□ -0.63
CUX1-209ENST00000487284 NKX6-2Q9C056 277 aaPredicted RBP11.11□□□□□ -0.63
CUX1-209ENST00000487284 TECRQ9NZ01 308 aaKnown RBP11.11□□□□□ -0.63
CUX1-209ENST00000487284 THYN1Q9P016 225 aa11.11□□□□□ -0.63
CUX1-209ENST00000487284 LINC01548A6NM66 108 aa11.1□□□□□ -0.63
CUX1-209ENST00000487284 COX7A2P2O60397 106 aa11.1□□□□□ -0.63
CUX1-209ENST00000487284 IGKV1-17P01599 117 aa11.1□□□□□ -0.63
CUX1-209ENST00000487284 CD81P60033 236 aa11.1□□□□□ -0.63
CUX1-209ENST00000487284 PLP1P60201 277 aa11.1□□□□□ -0.63
CUX1-209ENST00000487284 ECSCRQ19T08 205 aa11.1□□□□□ -0.63
CUX1-209ENST00000487284 PATE2Q6UY27 113 aa11.1□□□□□ -0.63
CUX1-209ENST00000487284 ELOA3CA0A087WX78 387 aaPredicted RBP11.09□□□□□ -0.63
CUX1-209ENST00000487284 PAGE4O60829 102 aa11.09□□□□□ -0.63
CUX1-209ENST00000487284 MFAP4P55083 255 aa11.09□□□□□ -0.63
CUX1-209ENST00000487284 TAS2R45P59539 299 aa11.09□□□□□ -0.63
CUX1-209ENST00000487284 HILS1P60008 231 aa11.09□□□□□ -0.63
CUX1-209ENST00000487284 BLCAPP62952 87 aa11.09□□□□□ -0.63
CUX1-209ENST00000487284 C10orf113Q5VZT2 155 aa11.09□□□□□ -0.63
CUX1-209ENST00000487284 FAM90A2PQ658T7 463 aa11.09□□□□□ -0.63
CUX1-209ENST00000487284 PQLC2Q6ZP29 291 aa11.09□□□□□ -0.63
CUX1-209ENST00000487284 TRAV30A0A087WSZ9 112 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 F8W735 103 aaPredicted RBP11.08□□□□□ -0.64
CUX1-209ENST00000487284 TMEM250H0YL14 139 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 OR2J3O76001 311 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 NDUFB8O95169 186 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 IGHG2P01859 326 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 FABP1P07148 127 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 C8orf88P0DMB2 117 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 FCGR2BP31994 310 aaPredicted RBP11.08□□□□□ -0.64
CUX1-209ENST00000487284 NPBWR1P48145 328 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 TIGITQ495A1 244 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 C9orf152Q5JTZ5 239 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 Q6ZS46 218 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 CLRN3Q8NCR9 226 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 ZNF503Q96F45 646 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 FAM167A-AS1Q96KT0 104 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 DOK5Q9P104 306 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 ARL2-SNX15V9GYD0 113 aa11.08□□□□□ -0.64
CUX1-209ENST00000487284 TRBV9A0A0B4J1U6 114 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 G3V318 75 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 IGF1P05019 195 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 PSG1P11464 419 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 MORN5Q5VZ52 161 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 SUN5Q8TC36 379 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 VN1R17PQ8TDU5 208 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 TXNDC17Q9BRA2 123 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 TMEM167BQ9NRX6 74 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 C21orf62Q9NYP8 219 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 FBXL7Q9UJT9 491 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 TRAV41A0A0B4J266 112 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 C11orf94C9JXX5 98 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 CLDN34H7C241 214 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 TOMM40O96008 361 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 OR4F5Q8NH21 305 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 OR4F4Q96R69 305 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 TXN2Q99757 166 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 SLC25A2Q9BXI2 301 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 ZNF355PQ9NSJ1 428 aa11.07□□□□□ -0.64
CUX1-209ENST00000487284 JMJD1CQ15652 2540 aa11.06□□□□□ -0.64
CUX1-209ENST00000487284 FAM181BA6NEQ2 426 aa11.06□□□□□ -0.64
CUX1-209ENST00000487284 GNG7O60262 68 aa11.06□□□□□ -0.64
CUX1-209ENST00000487284 OR7C2O60412 319 aa11.06□□□□□ -0.64
CUX1-209ENST00000487284 HYPMO75409 117 aa11.06□□□□□ -0.64
CUX1-209ENST00000487284 RNASE1P07998 156 aaKnown RBP11.06□□□□□ -0.64
CUX1-209ENST00000487284 ORM2P19652 201 aa11.06□□□□□ -0.64
CUX1-209ENST00000487284 CEBPGP53567 150 aa11.06□□□□□ -0.64
CUX1-209ENST00000487284 UBE2G2P60604 165 aa11.06□□□□□ -0.64
CUX1-209ENST00000487284 YPEL3P61236 119 aaPredicted RBP11.06□□□□□ -0.64
CUX1-209ENST00000487284 NECAP1Q8NC96 275 aa11.06□□□□□ -0.64
CUX1-209ENST00000487284 OR1B1Q8NGR6 318 aa11.06□□□□□ -0.64
CUX1-209ENST00000487284 UHRF2Q96PU4 802 aa11.06□□□□□ -0.64
CUX1-209ENST00000487284 S4R3C0 116 aa11.06□□□□□ -0.64
CUX1-209ENST00000487284 TRAV5A0A0B4J249 113 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 FAM74A7A6NL05 159 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 H3BQ15 152 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 PDE6DO43924 150 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 RD3LP0DJH9 198 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 ATP5G3P48201 142 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 RHOGP84095 191 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 BTN1A1Q13410 526 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 LINC00305Q7Z4B0 112 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 OR5AU1Q8NGC0 362 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 OR51G1Q8NGK1 321 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 JMJD8Q96S16 334 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 NPFFR1Q9GZQ6 430 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 ZNF580Q9UK33 172 aa11.05□□□□□ -0.64
CUX1-209ENST00000487284 YTHDF2Q9Y5A9 579 aaKnown RBP11.05□□□□□ -0.64
CUX1-209ENST00000487284 SETD2Q9BYW2 2564 aaPredicted RBP11.04□□□□□ -0.64
CUX1-209ENST00000487284 F6UZH7 168 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms