RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 LAMA5O15230 3695 aa20.85■□□□□ 0.93
HLA-C-208ENST00000487245 GPX1P07203 203 aa20.85■□□□□ 0.93
HLA-C-208ENST00000487245 MFAP2P55001 183 aa20.85■□□□□ 0.93
HLA-C-208ENST00000487245 LINC00479Q96M42 142 aa20.85■□□□□ 0.93
HLA-C-208ENST00000487245 SRSF8Q9BRL6 282 aaKnown RBP20.85■□□□□ 0.93
HLA-C-208ENST00000487245 SAMD10Q9BYL1 202 aa20.85■□□□□ 0.93
HLA-C-208ENST00000487245 C7orf69Q9H7B7 122 aa20.85■□□□□ 0.93
HLA-C-208ENST00000487245 BMPR1BO00238 502 aa20.84■□□□□ 0.93
HLA-C-208ENST00000487245 CNTFRP26992 372 aa20.84■□□□□ 0.93
HLA-C-208ENST00000487245 HCP5Q6MZN7 132 aa20.84■□□□□ 0.93
HLA-C-208ENST00000487245 MRPL52Q86TS9 123 aaKnown RBP20.84■□□□□ 0.93
HLA-C-208ENST00000487245 ONECUT1Q9UBC0 465 aa20.84■□□□□ 0.93
HLA-C-208ENST00000487245 TOMM20LQ6UXN7 152 aa20.84■□□□□ 0.93
HLA-C-208ENST00000487245 SIGLECL1Q8N7X8 197 aa20.84■□□□□ 0.93
HLA-C-208ENST00000487245 ZNF331Q9NQX6 463 aaPredicted RBP20.84■□□□□ 0.93
HLA-C-208ENST00000487245 EPDR1Q9UM22 224 aa20.84■□□□□ 0.93
HLA-C-208ENST00000487245 SPINK4O60575 86 aa20.83■□□□□ 0.92
HLA-C-208ENST00000487245 IGHV3-48P01763 117 aa20.83■□□□□ 0.92
HLA-C-208ENST00000487245 MRPL54Q6P161 138 aaKnown RBP20.83■□□□□ 0.92
HLA-C-208ENST00000487245 KCNS1Q96KK3 526 aa20.83■□□□□ 0.92
HLA-C-208ENST00000487245 F11RQ9Y624 299 aaKnown RBP20.83■□□□□ 0.92
HLA-C-208ENST00000487245 DLX1P56177 255 aa20.82■□□□□ 0.92
HLA-C-208ENST00000487245 USF2Q15853 346 aaPredicted RBP20.82■□□□□ 0.92
HLA-C-208ENST00000487245 C11orf71Q6IPW1 123 aa20.82■□□□□ 0.92
HLA-C-208ENST00000487245 NUDT10Q8NFP7 164 aa20.82■□□□□ 0.92
HLA-C-208ENST00000487245 NUDT11Q96G61 164 aa20.82■□□□□ 0.92
HLA-C-208ENST00000487245 APCSP02743 223 aa20.81■□□□□ 0.92
HLA-C-208ENST00000487245 CDSNQ15517 529 aa20.81■□□□□ 0.92
HLA-C-208ENST00000487245 NHLRC2Q8NBF2 726 aa20.81■□□□□ 0.92
HLA-C-208ENST00000487245 FAM168AQ92567 244 aa20.81■□□□□ 0.92
HLA-C-208ENST00000487245 ATMQ13315 3056 aa20.81■□□□□ 0.92
HLA-C-208ENST00000487245 TEX22C9J3V5 150 aa20.81■□□□□ 0.92
HLA-C-208ENST00000487245 M0R1W7 72 aa20.81■□□□□ 0.92
HLA-C-208ENST00000487245 HYPMO75409 117 aa20.81■□□□□ 0.92
HLA-C-208ENST00000487245 OR11H6Q8NGC7 330 aa20.81■□□□□ 0.92
HLA-C-208ENST00000487245 ZNF586Q9NXT0 402 aa20.81■□□□□ 0.92
HLA-C-208ENST00000487245 TLN1Q9Y490 2541 aaKnown RBP20.81■□□□□ 0.92
HLA-C-208ENST00000487245 MALRD1Q5VYJ5 2156 aa20.8■□□□□ 0.92
HLA-C-208ENST00000487245 MOSP00540 346 aa20.8■□□□□ 0.92
HLA-C-208ENST00000487245 HIST1H1EP10412 219 aaKnown RBP20.8■□□□□ 0.92
HLA-C-208ENST00000487245 HTR1DP28221 377 aa20.8■□□□□ 0.92
HLA-C-208ENST00000487245 SLC35B1P78383 322 aa20.8■□□□□ 0.92
HLA-C-208ENST00000487245 EREGO14944 169 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 SRIP30626 198 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 CEACAM3P40198 252 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 RUSC1-AS1Q66K80 236 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 OR1B1Q8NGR6 318 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 FBXL15Q9H469 300 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 MRPL27Q9P0M9 148 aaKnown RBP20.79■□□□□ 0.92
HLA-C-208ENST00000487245 DPM3Q9P2X0 92 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 TRAV34A0A0B4J273 112 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 A0A1W2PS18 150 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 ZNF253O75346 499 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 ORM2P19652 201 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 CDKN1AP38936 164 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 KIAA1644Q3SXP7 199 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 TSKUQ8WUA8 353 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 TMEM190Q8WZ59 177 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 FBXL7Q9UJT9 491 aa20.79■□□□□ 0.92
HLA-C-208ENST00000487245 M0R143 59 aa20.78■□□□□ 0.92
HLA-C-208ENST00000487245 CA1P00915 261 aaPredicted RBP20.78■□□□□ 0.92
HLA-C-208ENST00000487245 SLC25A5P05141 298 aaKnown RBP20.78■□□□□ 0.92
HLA-C-208ENST00000487245 NBEAP1P0C6P0 100 aa20.78■□□□□ 0.92
HLA-C-208ENST00000487245 GP9P14770 177 aa20.78■□□□□ 0.92
HLA-C-208ENST00000487245 RAB4AP20338 218 aa20.78■□□□□ 0.92
HLA-C-208ENST00000487245 UBE2G1P62253 170 aa20.78■□□□□ 0.92
HLA-C-208ENST00000487245 PRB3Q04118 309 aaPredicted RBP20.78■□□□□ 0.92
HLA-C-208ENST00000487245 ATP5L2Q7Z4Y8 100 aa20.78■□□□□ 0.92
HLA-C-208ENST00000487245 SRSF12Q8WXF0 261 aaKnown RBP20.78■□□□□ 0.92
HLA-C-208ENST00000487245 SNHG12Q9BXW3 62 aa20.78■□□□□ 0.92
HLA-C-208ENST00000487245 DMXL2Q8TDJ6 3036 aa20.78■□□□□ 0.92
HLA-C-208ENST00000487245 NAV3Q8IVL0 2385 aa20.78■□□□□ 0.92
HLA-C-208ENST00000487245 CD33P20138 364 aa20.77■□□□□ 0.92
HLA-C-208ENST00000487245 PLGLAQ15195 96 aa20.77■□□□□ 0.92
HLA-C-208ENST00000487245 C5orf17Q8NAS9 161 aa20.77■□□□□ 0.92
HLA-C-208ENST00000487245 NUP35Q8NFH5 326 aa20.77■□□□□ 0.92
HLA-C-208ENST00000487245 GPR82Q96P67 336 aa20.77■□□□□ 0.92
HLA-C-208ENST00000487245 MLST8Q9BVC4 326 aa20.77■□□□□ 0.92
HLA-C-208ENST00000487245 SSBP3Q9BWW4 388 aaPredicted RBP20.77■□□□□ 0.92
HLA-C-208ENST00000487245 TBL2Q9Y4P3 447 aaKnown RBP20.77■□□□□ 0.92
HLA-C-208ENST00000487245 LOC105371242A0A075B767 164 aa20.77■□□□□ 0.92
HLA-C-208ENST00000487245 RNF224P0DH78 156 aa20.77■□□□□ 0.92
HLA-C-208ENST00000487245 GNG5P63218 68 aa20.77■□□□□ 0.92
HLA-C-208ENST00000487245 Q8N976 141 aa20.77■□□□□ 0.92
HLA-C-208ENST00000487245 ATG101Q9BSB4 218 aa20.77■□□□□ 0.92
HLA-C-208ENST00000487245 NRN1Q9NPD7 142 aa20.77■□□□□ 0.92
HLA-C-208ENST00000487245 ZNF492Q9P255 531 aa20.77■□□□□ 0.92
HLA-C-208ENST00000487245 PGPA6NDG6 321 aa20.76■□□□□ 0.91
HLA-C-208ENST00000487245 ZNF324O75467 553 aaPredicted RBP20.76■□□□□ 0.91
HLA-C-208ENST00000487245 OR2J3O76001 311 aa20.76■□□□□ 0.91
HLA-C-208ENST00000487245 TOMM40O96008 361 aa20.76■□□□□ 0.91
HLA-C-208ENST00000487245 NUTF2P61970 127 aaKnown RBP20.76■□□□□ 0.91
HLA-C-208ENST00000487245 FMC1Q96HJ9 113 aa20.76■□□□□ 0.91
HLA-C-208ENST00000487245 RCHY1Q96PM5 261 aa20.76■□□□□ 0.91
HLA-C-208ENST00000487245 MIEN1Q9BRT3 115 aa20.76■□□□□ 0.91
HLA-C-208ENST00000487245 CEP295Q9C0D2 2601 aa20.76■□□□□ 0.91
HLA-C-208ENST00000487245 TIMM23O14925 209 aa20.75■□□□□ 0.91
HLA-C-208ENST00000487245 ARF6P62330 175 aa20.75■□□□□ 0.91
HLA-C-208ENST00000487245 KLF5Q13887 457 aaPredicted RBP20.75■□□□□ 0.91
HLA-C-208ENST00000487245 CT83Q5H943 113 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms