RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 NBEAP1P0C6P0 100 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 C21orf62-AS1Q17RA5 79 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 DEFB123Q8N688 67 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 OR1B1Q8NGR6 318 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 ZNF492Q9P255 531 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 RPH3ALQ9UNE2 315 aa9.81□□□□□ -0.84
COL3A1-206ENST00000487010 IGHV1-24A0A0C4DH33 117 aa9.8□□□□□ -0.84
COL3A1-206ENST00000487010 M0QZ24 198 aa9.8□□□□□ -0.84
COL3A1-206ENST00000487010 LTAP01374 205 aa9.8□□□□□ -0.84
COL3A1-206ENST00000487010 P01737 135 aa9.8□□□□□ -0.84
COL3A1-206ENST00000487010 FOXA3P55318 350 aaPredicted RBP9.8□□□□□ -0.84
COL3A1-206ENST00000487010 DIAPH2-AS1Q14236 149 aa9.8□□□□□ -0.84
COL3A1-206ENST00000487010 TMEM200BQ69YZ2 307 aa9.8□□□□□ -0.84
COL3A1-206ENST00000487010 RNASE8Q8TDE3 154 aaKnown RBP9.8□□□□□ -0.84
COL3A1-206ENST00000487010 FMC1Q96HJ9 113 aa9.8□□□□□ -0.84
COL3A1-206ENST00000487010 PGLYRP4Q96LB8 373 aa9.8□□□□□ -0.84
COL3A1-206ENST00000487010 ST20Q9HBF5 79 aa9.8□□□□□ -0.84
COL3A1-206ENST00000487010 A0A1W2PPI3 338 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 SYS1-DBNDD2H3BUS1 97 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 CRYGCP07315 174 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 CD24P25063 80 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 RUSC1-AS1Q66K80 236 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 ETFRF1Q6IPR1 90 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 FAM71F2Q6NXP2 309 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 LINC00173Q6ZV60 143 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 LHFPL4Q7Z7J7 247 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 RPRMLQ8N4K4 120 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 C5orf17Q8NAS9 161 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 OR10X1Q8NGY0 326 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 TMEM186Q96B77 213 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 GFRA4Q9GZZ7 299 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 WASHC3Q9Y3C0 194 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 K7EP13 123 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 FCN3O75636 299 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 CCL8P80075 99 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 FBLN7Q53RD9 439 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 C22orf34Q6ZV56 151 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 TRGV9Q99603 122 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 FAM215AQ9Y5M1 114 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 ARFGEF3Q5TH69 2177 aa9.79□□□□□ -0.84
COL3A1-206ENST00000487010 LOC105371242A0A075B767 164 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 IGHV2-70DA0A0C4DH43 119 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 LEPROTL1O95214 131 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 TCRAP04437 139 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 CD40P25942 277 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 RBX1P62877 108 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 MRGPRG-AS1Q2M3A8 158 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 VMA21Q3ZAQ7 101 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 PVRIGQ6DKI7 326 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 RBPMS2Q6ZRY4 209 aaKnown RBP9.78□□□□□ -0.84
COL3A1-206ENST00000487010 LINC00311Q8N616 119 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 ST6GALNAC6Q969X2 333 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 TPSG1Q9NRR2 321 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 ICE1Q9Y2F5 2266 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 DSPP15924 2871 aaKnown RBP9.78□□□□□ -0.84
COL3A1-206ENST00000487010 SLC25A17O43808 307 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 GP9P14770 177 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 DEFB109BQ30KR1 87 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 LRRC10Q5BKY1 277 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 C8orf31Q8N9H6 132 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 DAZAP1Q96EP5 407 aaKnown RBP9.78□□□□□ -0.84
COL3A1-206ENST00000487010 NDFIP1Q9BT67 221 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 Q9H3A6 140 aa9.78□□□□□ -0.84
COL3A1-206ENST00000487010 LOC102724200A0A096LPH7 203 aaPredicted RBP9.77□□□□□ -0.85
COL3A1-206ENST00000487010 hDV102S1A0JD36 115 aa9.77□□□□□ -0.85
COL3A1-206ENST00000487010 FAM231BA6NCW3 169 aa9.77□□□□□ -0.85
COL3A1-206ENST00000487010 FAM87AP0C7U9 286 aa9.77□□□□□ -0.85
COL3A1-206ENST00000487010 TNFRSF1AP19438 455 aa9.77□□□□□ -0.85
COL3A1-206ENST00000487010 HCP5Q6MZN7 132 aa9.77□□□□□ -0.85
COL3A1-206ENST00000487010 NUP37Q8NFH4 326 aa9.77□□□□□ -0.85
COL3A1-206ENST00000487010 RITA1Q96K30 269 aa9.77□□□□□ -0.85
COL3A1-206ENST00000487010 TP73-AS1Q9UF72 201 aa9.77□□□□□ -0.85
COL3A1-206ENST00000487010 NPIPB6E9PJ23 425 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 H3BTX0 84 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 OR5AL1P0C617 328 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 ZNF137PP52743 207 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 FAM27E3Q08E93 113 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 MPV17L2Q567V2 206 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 C1orf185Q5T7R7 199 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 C22orf15Q8WYQ4 148 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 H1FXQ92522 213 aaKnown RBP9.76□□□□□ -0.85
COL3A1-206ENST00000487010 TMEM191AQ9H0A3 160 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 ZNF835Q9Y2P0 537 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 PRRC2CQ9Y520 2896 aaKnown RBP9.76□□□□□ -0.85
COL3A1-206ENST00000487010 NAV3Q8IVL0 2385 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 CHEK1O14757 476 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 LIPFP07098 398 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 MC5RP33032 325 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 PLP1P60201 277 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 TMEM116Q8NCL8 245 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 OR4C5Q8NGB2 326 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 C8orf46Q8TAG6 207 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 NCOR1O75376 2440 aa9.76□□□□□ -0.85
COL3A1-206ENST00000487010 SVILO95425 2214 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 SPENQ96T58 3664 aaKnown RBP9.75□□□□□ -0.85
COL3A1-206ENST00000487010 TRAV30A0A087WSZ9 112 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 C17orf100A8MU93 164 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 HAX1O00165 279 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 LGALS7P47929 136 aa9.75□□□□□ -0.85
COL3A1-206ENST00000487010 SLC25A34Q6PIV7 304 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms