RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 TECRQ9NZ01 308 aaKnown RBP11.46□□□□□ -0.57
POLR2J3-204ENST00000486319 ELOA3CA0A087WX78 387 aaPredicted RBP11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 PSMB11A5LHX3 300 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 DNAJC9-AS1A6NH13 148 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 H3BUX3 64 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 COX7A2P2O60397 106 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 CLN5O75503 358 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 FABP1P07148 127 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 HIST1H1BP16401 226 aaKnown RBP11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 SPATA31B1PQ5VZV4 182 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 MIR17HGQ75NE6 70 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 C16orf82Q7Z2V1 217 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 CYB561D1Q8N8Q1 229 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 TMEM37Q8WXS4 190 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 FANCD2OSQ96PS1 177 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 TXNDC17Q9BRA2 123 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 TRAV30A0A087WSZ9 112 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 A6NDX4 124 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 M0QZK8 103 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 ATP6V0E1O15342 81 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 PAGE4O60829 102 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 IGLC1P0CG04 106 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 GCHFRP30047 84 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 NPBWR1P48145 328 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 AKIRIN2Q53H80 203 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 C10orf113Q5VZT2 155 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 UNQ5815/PRO19632Q6UWF5 114 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 PQLC2Q6ZP29 291 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 TMEM219Q86XT9 240 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 CLRN3Q8NCR9 226 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 OR5T1Q8NG75 326 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 PRDM13Q9H4Q3 707 aa11.45□□□□□ -0.58
POLR2J3-204ENST00000486319 STAB1Q9NY15 2570 aa11.44□□□□□ -0.58
POLR2J3-204ENST00000486319 TMEM250H0YL14 139 aa11.44□□□□□ -0.58
POLR2J3-204ENST00000486319 CLDN34H7C241 214 aa11.44□□□□□ -0.58
POLR2J3-204ENST00000486319 HOXA3O43365 443 aaPredicted RBP11.44□□□□□ -0.58
POLR2J3-204ENST00000486319 C8orf88P0DMB2 117 aa11.44□□□□□ -0.58
POLR2J3-204ENST00000486319 CEBPGP53567 150 aa11.44□□□□□ -0.58
POLR2J3-204ENST00000486319 MFAP4P55083 255 aa11.44□□□□□ -0.58
POLR2J3-204ENST00000486319 CD81P60033 236 aa11.44□□□□□ -0.58
POLR2J3-204ENST00000486319 KLK9Q2XQG4 91 aa11.44□□□□□ -0.58
POLR2J3-204ENST00000486319 Q6YL49 198 aa11.44□□□□□ -0.58
POLR2J3-204ENST00000486319 SUN5Q8TC36 379 aa11.44□□□□□ -0.58
POLR2J3-204ENST00000486319 TMEM167BQ9NRX6 74 aa11.44□□□□□ -0.58
POLR2J3-204ENST00000486319 KLK9Q9UKQ9 250 aa11.44□□□□□ -0.58
POLR2J3-204ENST00000486319 SCGB2A1O75556 95 aa11.43□□□□□ -0.58
POLR2J3-204ENST00000486319 PLP1P60201 277 aa11.43□□□□□ -0.58
POLR2J3-204ENST00000486319 BTN1A1Q13410 526 aa11.43□□□□□ -0.58
POLR2J3-204ENST00000486319 ECSCRQ19T08 205 aa11.43□□□□□ -0.58
POLR2J3-204ENST00000486319 OR4F5Q8NH21 305 aa11.43□□□□□ -0.58
POLR2J3-204ENST00000486319 OR4F4Q96R69 305 aa11.43□□□□□ -0.58
POLR2J3-204ENST00000486319 ARL2-SNX15V9GYD0 113 aa11.43□□□□□ -0.58
POLR2J3-204ENST00000486319 C11orf94C9JXX5 98 aa11.42□□□□□ -0.58
POLR2J3-204ENST00000486319 PDE6DO43924 150 aa11.42□□□□□ -0.58
POLR2J3-204ENST00000486319 AMY1AP04745 511 aa11.42□□□□□ -0.58
POLR2J3-204ENST00000486319 RNASE1P07998 156 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-204ENST00000486319 CRIP2P52943 208 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-204ENST00000486319 LY6EQ16553 131 aa11.42□□□□□ -0.58
POLR2J3-204ENST00000486319 FAM90A2PQ658T7 463 aa11.42□□□□□ -0.58
POLR2J3-204ENST00000486319 PATE2Q6UY27 113 aa11.42□□□□□ -0.58
POLR2J3-204ENST00000486319 NIPSNAP3BQ9BS92 247 aa11.42□□□□□ -0.58
POLR2J3-204ENST00000486319 DOK5Q9P104 306 aa11.42□□□□□ -0.58
POLR2J3-204ENST00000486319 GNG7O60262 68 aa11.41□□□□□ -0.58
POLR2J3-204ENST00000486319 OR7C2O60412 319 aa11.41□□□□□ -0.58
POLR2J3-204ENST00000486319 HYPMO75409 117 aa11.41□□□□□ -0.58
POLR2J3-204ENST00000486319 OR2J3O76001 311 aa11.41□□□□□ -0.58
POLR2J3-204ENST00000486319 UBE2G2P60604 165 aa11.41□□□□□ -0.58
POLR2J3-204ENST00000486319 TIGITQ495A1 244 aa11.41□□□□□ -0.58
POLR2J3-204ENST00000486319 CST9LP1Q5W188 147 aa11.41□□□□□ -0.58
POLR2J3-204ENST00000486319 C12orf54Q6X4T0 127 aa11.41□□□□□ -0.58
POLR2J3-204ENST00000486319 OR1B1Q8NGR6 318 aa11.41□□□□□ -0.58
POLR2J3-204ENST00000486319 VN1R17PQ8TDU5 208 aa11.41□□□□□ -0.58
POLR2J3-204ENST00000486319 TXN2Q99757 166 aa11.41□□□□□ -0.58
POLR2J3-204ENST00000486319 C21orf62Q9NYP8 219 aa11.41□□□□□ -0.58
POLR2J3-204ENST00000486319 PUS1Q9Y606 427 aaKnown RBP eCLIP11.41□□□□□ -0.58
POLR2J3-204ENST00000486319 TMEM89A2RUT3 159 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 F6UZH7 168 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 H3BQ15 152 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 M0R036 132 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 NDUFB8O95169 186 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 IGKV1-17P01599 117 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 RD3LP0DJH9 198 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 PSG1P11464 419 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 ORM2P19652 201 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 FCGR2BP31994 310 aaPredicted RBP11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 YPEL3P61236 119 aaPredicted RBP11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 FAM74A3Q4VXF1 159 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 AWAT1Q58HT5 328 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 LINC00305Q7Z4B0 112 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 STXBP6Q8NFX7 210 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 ZNF355PQ9NSJ1 428 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 FBXL7Q9UJT9 491 aa11.4□□□□□ -0.58
POLR2J3-204ENST00000486319 SH2D7A6NKC9 451 aaPredicted RBP11.4□□□□□ -0.59
POLR2J3-204ENST00000486319 LINC01548A6NM66 108 aa11.4□□□□□ -0.59
POLR2J3-204ENST00000486319 TOMM40O96008 361 aa11.4□□□□□ -0.59
POLR2J3-204ENST00000486319 IGF1P05019 195 aa11.4□□□□□ -0.59
POLR2J3-204ENST00000486319 RHEBQ15382 184 aa11.4□□□□□ -0.59
POLR2J3-204ENST00000486319 Q56UQ5 140 aa11.4□□□□□ -0.59
POLR2J3-204ENST00000486319 TMEM86BQ8N661 226 aa11.4□□□□□ -0.59
POLR2J3-204ENST00000486319 OR5AU1Q8NGC0 362 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms