RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 STHQ8IWL8 128 aa13.5□□□□□ -0.25
PRPF40A-209ENST00000486100 TMEM217Q8N7C4 229 aa13.5□□□□□ -0.25
PRPF40A-209ENST00000486100 OR51G1Q8NGK1 321 aa13.5□□□□□ -0.25
PRPF40A-209ENST00000486100 SLC35E1Q96K37 410 aa13.5□□□□□ -0.25
PRPF40A-209ENST00000486100 RARRES2Q99969 163 aa13.5□□□□□ -0.25
PRPF40A-209ENST00000486100 ZFP92A6NM28 416 aa13.49□□□□□ -0.25
PRPF40A-209ENST00000486100 BUB3O43684 328 aa13.49□□□□□ -0.25
PRPF40A-209ENST00000486100 NDUFB6O95139 128 aa13.49□□□□□ -0.25
PRPF40A-209ENST00000486100 CA1P00915 261 aaPredicted RBP13.49□□□□□ -0.25
PRPF40A-209ENST00000486100 ZNF688P0C7X2 276 aa13.49□□□□□ -0.25
PRPF40A-209ENST00000486100 RPP30P78346 268 aaKnown RBP13.49□□□□□ -0.25
PRPF40A-209ENST00000486100 DHRS2Q13268 280 aa13.49□□□□□ -0.25
PRPF40A-209ENST00000486100 GGNBP1Q5YKI7 109 aa13.49□□□□□ -0.25
PRPF40A-209ENST00000486100 CIB3Q96Q77 187 aaPredicted RBP13.49□□□□□ -0.25
PRPF40A-209ENST00000486100 SDHCQ99643 169 aaPredicted RBP13.49□□□□□ -0.25
PRPF40A-209ENST00000486100 PLECQ15149 4684 aaKnown RBP13.49□□□□□ -0.25
PRPF40A-209ENST00000486100 IGKV1D-37A0A075B6S9 117 aa13.48□□□□□ -0.25
PRPF40A-209ENST00000486100 C9orf170A2RU37 121 aa13.48□□□□□ -0.25
PRPF40A-209ENST00000486100 CXorf65A6NEN9 183 aa13.48□□□□□ -0.25
PRPF40A-209ENST00000486100 SYNGR2O43760 224 aa13.48□□□□□ -0.25
PRPF40A-209ENST00000486100 RNF125Q96EQ8 232 aa13.48□□□□□ -0.25
PRPF40A-209ENST00000486100 DNAH1Q9P2D7 4330 aa13.48□□□□□ -0.25
PRPF40A-209ENST00000486100 ZNF90Q03938 601 aa13.47□□□□□ -0.25
PRPF40A-209ENST00000486100 PMS2P11Q13670 270 aa13.47□□□□□ -0.25
PRPF40A-209ENST00000486100 TRPT1Q86TN4 253 aaKnown RBP13.47□□□□□ -0.25
PRPF40A-209ENST00000486100 OR11H2Q8NH07 326 aa13.47□□□□□ -0.25
PRPF40A-209ENST00000486100 MAGT1Q9H0U3 335 aa13.47□□□□□ -0.25
PRPF40A-209ENST00000486100 SEPSECSQ9HD40 501 aaKnown RBP13.47□□□□□ -0.25
PRPF40A-209ENST00000486100 PFDN2Q9UHV9 154 aa13.47□□□□□ -0.25
PRPF40A-209ENST00000486100 PAIP2BQ9ULR5 123 aaKnown RBP13.47□□□□□ -0.25
PRPF40A-209ENST00000486100 FLVCR2Q9UPI3 526 aa13.47□□□□□ -0.25
PRPF40A-209ENST00000486100 LINC00854A0A1B0GVQ3 168 aa13.46□□□□□ -0.25
PRPF40A-209ENST00000486100 KNCNA6PVL3 124 aa13.46□□□□□ -0.25
PRPF40A-209ENST00000486100 CENPXA8MT69 81 aa13.46□□□□□ -0.25
PRPF40A-209ENST00000486100 SNRPGP15A8MWD9 76 aa13.46□□□□□ -0.25
PRPF40A-209ENST00000486100 WRBO00258 174 aa13.46□□□□□ -0.25
PRPF40A-209ENST00000486100 FABP1P07148 127 aa13.46□□□□□ -0.25
PRPF40A-209ENST00000486100 NUP62P37198 522 aaPredicted RBP13.46□□□□□ -0.25
PRPF40A-209ENST00000486100 OR8G2PQ6IF36 304 aa13.46□□□□□ -0.25
PRPF40A-209ENST00000486100 SIGLEC15Q6ZMC9 328 aa13.46□□□□□ -0.25
PRPF40A-209ENST00000486100 TRGV9Q99603 122 aa13.46□□□□□ -0.25
PRPF40A-209ENST00000486100 C7orf50Q9BRJ6 194 aaKnown RBP13.46□□□□□ -0.25
PRPF40A-209ENST00000486100 PBDC1Q9BVG4 233 aa13.46□□□□□ -0.25
PRPF40A-209ENST00000486100 NRN1Q9NPD7 142 aa13.46□□□□□ -0.25
PRPF40A-209ENST00000486100 NUPR2A6NF83 97 aa13.45□□□□□ -0.26
PRPF40A-209ENST00000486100 ADAP1O75689 374 aa13.45□□□□□ -0.26
PRPF40A-209ENST00000486100 OR4E1P0C645 316 aa13.45□□□□□ -0.26
PRPF40A-209ENST00000486100 ID3Q02535 119 aa13.45□□□□□ -0.26
PRPF40A-209ENST00000486100 TMEM41BQ5BJD5 291 aa13.45□□□□□ -0.26
PRPF40A-209ENST00000486100 MORN3Q6PF18 240 aaPredicted RBP13.45□□□□□ -0.26
PRPF40A-209ENST00000486100 CEMP1Q6PRD7 247 aaPredicted RBP13.45□□□□□ -0.26
PRPF40A-209ENST00000486100 COQ8AQ8NI60 647 aa13.45□□□□□ -0.26
PRPF40A-209ENST00000486100 RAB40CQ96S21 281 aa13.45□□□□□ -0.26
PRPF40A-209ENST00000486100 HYDINQ4G0P3 5121 aa13.44□□□□□ -0.26
PRPF40A-209ENST00000486100 GIG44P09565 113 aaPredicted RBP13.44□□□□□ -0.26
PRPF40A-209ENST00000486100 SPP1P10451 314 aa13.44□□□□□ -0.26
PRPF40A-209ENST00000486100 IL7P13232 177 aa13.44□□□□□ -0.26
PRPF40A-209ENST00000486100 BTCP35070 178 aa13.44□□□□□ -0.26
PRPF40A-209ENST00000486100 SNRPD3P62318 126 aaKnown RBP13.44□□□□□ -0.26
PRPF40A-209ENST00000486100 PSMG4Q5JS54 123 aa13.44□□□□□ -0.26
PRPF40A-209ENST00000486100 ACTL10Q5JWF8 245 aa13.44□□□□□ -0.26
PRPF40A-209ENST00000486100 SPANXN5Q5MJ07 72 aa13.44□□□□□ -0.26
PRPF40A-209ENST00000486100 THAP8Q8NA92 274 aa13.44□□□□□ -0.26
PRPF40A-209ENST00000486100 IGKV1OR2-108A0A075B7D4 117 aa13.43□□□□□ -0.26
PRPF40A-209ENST00000486100 PRSS46E5RG02 174 aa13.43□□□□□ -0.26
PRPF40A-209ENST00000486100 IFNA21P01568 189 aa13.43□□□□□ -0.26
PRPF40A-209ENST00000486100 OR2F1Q13607 317 aa13.43□□□□□ -0.26
PRPF40A-209ENST00000486100 C1orf194Q5T5A4 169 aa13.43□□□□□ -0.26
PRPF40A-209ENST00000486100 C11orf68Q9H3H3 251 aaKnown RBP13.43□□□□□ -0.26
PRPF40A-209ENST00000486100 STRAPQ9Y3F4 350 aaKnown RBP13.43□□□□□ -0.26
PRPF40A-209ENST00000486100 CFDP00746 253 aaPredicted RBP13.42□□□□□ -0.26
PRPF40A-209ENST00000486100 ANXA7P20073 488 aaKnown RBP13.42□□□□□ -0.26
PRPF40A-209ENST00000486100 LYZP61626 148 aa13.42□□□□□ -0.26
PRPF40A-209ENST00000486100 C4orf46Q504U0 113 aa13.42□□□□□ -0.26
PRPF40A-209ENST00000486100 S100ZQ8WXG8 99 aa13.42□□□□□ -0.26
PRPF40A-209ENST00000486100 NKX2-1P43699 371 aaPredicted RBP13.41□□□□□ -0.26
PRPF40A-209ENST00000486100 POLR2GP62487 172 aaKnown RBP eCLIP13.41□□□□□ -0.26
PRPF40A-209ENST00000486100 OR4D5Q8NGN0 318 aa13.41□□□□□ -0.26
PRPF40A-209ENST00000486100 FBXL17Q9UF56 701 aa13.41□□□□□ -0.26
PRPF40A-209ENST00000486100 KLK5Q9Y337 293 aaPredicted RBP13.41□□□□□ -0.26
PRPF40A-209ENST00000486100 H3BP45 60 aa13.4□□□□□ -0.26
PRPF40A-209ENST00000486100 PLA2G10O15496 165 aa13.4□□□□□ -0.26
PRPF40A-209ENST00000486100 C11orf45Q8TAV5 145 aa13.4□□□□□ -0.26
PRPF40A-209ENST00000486100 PHLDA1Q8WV24 401 aaPredicted RBP13.4□□□□□ -0.26
PRPF40A-209ENST00000486100 PSENENQ9NZ42 101 aa13.4□□□□□ -0.26
PRPF40A-209ENST00000486100 C4BPBP20851 252 aa13.39□□□□□ -0.27
PRPF40A-209ENST00000486100 PPP1R14BQ96C90 147 aa13.39□□□□□ -0.27
PRPF40A-209ENST00000486100 SMIM8Q96KF7 97 aa13.39□□□□□ -0.27
PRPF40A-209ENST00000486100 MFFQ9GZY8 342 aa13.39□□□□□ -0.27
PRPF40A-209ENST00000486100 H3BMM0 161 aa13.38□□□□□ -0.27
PRPF40A-209ENST00000486100 DEFB4AO15263 64 aa13.38□□□□□ -0.27
PRPF40A-209ENST00000486100 ID1P41134 155 aa13.38□□□□□ -0.27
PRPF40A-209ENST00000486100 NANOS2P60321 138 aaKnown RBP13.38□□□□□ -0.27
PRPF40A-209ENST00000486100 NUTF2P61970 127 aaKnown RBP13.38□□□□□ -0.27
PRPF40A-209ENST00000486100 TMEM144Q7Z5S9 345 aa13.38□□□□□ -0.27
PRPF40A-209ENST00000486100 OR8I2Q8N0Y5 310 aa13.38□□□□□ -0.27
PRPF40A-209ENST00000486100 Q8NAQ8 132 aa13.38□□□□□ -0.27
PRPF40A-209ENST00000486100 CSNK1G2-AS1Q8NCQ2 148 aa13.38□□□□□ -0.27
PRPF40A-209ENST00000486100 BPIFCQ8NFQ6 507 aa13.38□□□□□ -0.27
PRPF40A-209ENST00000486100 MITD1Q8WV92 249 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms