RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ZNF546Q86UE3 836 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 GTSCR1Q86UQ5 136 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 TMEM252Q8N6L7 170 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 TMEM217Q8N7C4 229 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 ZNF709Q8N972 641 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 THAP8Q8NA92 274 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 MRAPQ8TCY5 172 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 PPP1R14BQ96C90 147 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 KCNIP2Q9NS61 270 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 UQCC1Q9NVA1 299 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 SMPXQ9UHP9 88 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 RABAC1Q9UI14 185 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 EPPK1P58107 5090 aaKnown RBP6.29□□□□□ -1.4
SF3A1-208ENST00000485618 IGHV7-4-1A0A0J9YVY3 117 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 TMEM213A2RRL7 107 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 HELTA6NFD8 242 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 FAM24AA6NFZ4 105 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 IFNA5P01569 189 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 IGLV1-51P01701 117 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 IL4P05112 153 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 C8orf88P0DMB2 117 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 PSG1P11464 419 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 RPL12P30050 165 aaKnown RBP6.29□□□□□ -1.4
SF3A1-208ENST00000485618 RPL11P62913 178 aaKnown RBP6.29□□□□□ -1.4
SF3A1-208ENST00000485618 EGFEM1PQ0D2K5 195 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 DEFB114Q30KQ6 69 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 UNQ9165/PRO28630Q6UXU0 137 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 Q6ZRG5 221 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 SCGB1C1Q8TD33 95 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 TMEM147Q9BVK8 224 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 RHPN1-AS1Q9BWJ2 59 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 KRTAP17-1Q9BYP8 105 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 FBXL17Q9UF56 701 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 SLC45A2Q9UMX9 530 aa6.29□□□□□ -1.4
SF3A1-208ENST00000485618 ZNF256Q9Y2P7 627 aaPredicted RBP6.29□□□□□ -1.4
SF3A1-208ENST00000485618 ELOA3CA0A087WX78 387 aaPredicted RBP6.28□□□□□ -1.4
SF3A1-208ENST00000485618 HYPMO75409 117 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 HNRNPCP07910 306 aaKnown RBP eCLIP6.28□□□□□ -1.4
SF3A1-208ENST00000485618 GP9P14770 177 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 CXCL3P19876 107 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 EWSR1Q01844 656 aaKnown RBP eCLIP6.28□□□□□ -1.4
SF3A1-208ENST00000485618 GUCA2BQ16661 112 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 C1orf194Q5T5A4 169 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 SAMD13Q5VXD3 122 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 C11orf87Q6NUJ2 197 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 IL34Q6ZMJ4 242 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 CYP2G1PQ6ZSU1 146 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 OR11H7Q8NGC8 314 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 OR2T35Q8NGX2 323 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 RNF125Q96EQ8 232 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 PBDC1Q9BVG4 233 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 OR5AC2Q9NZP5 309 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 MRPL36Q9P0J6 103 aaKnown RBP6.28□□□□□ -1.4
SF3A1-208ENST00000485618 MBD2Q9UBB5 411 aa6.28□□□□□ -1.4
SF3A1-208ENST00000485618 OR4C46A6NHA9 309 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 PMS2P5A8MQ11 134 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 PRSS46E5RG02 174 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 C17orf112F2Z3M2 114 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 DNASE2O00115 360 aaPredicted RBP6.27□□□□□ -1.41
SF3A1-208ENST00000485618 CHEK1O14757 476 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 ZNF207O43670 478 aaKnown RBP6.27□□□□□ -1.41
SF3A1-208ENST00000485618 LYL1P12980 280 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 CRYBB3P26998 211 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 CAMLGP49069 296 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 LYZP61626 148 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 OR2F1Q13607 317 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 ZNF266Q14584 549 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 CD300EQ496F6 205 aaPredicted RBP6.27□□□□□ -1.41
SF3A1-208ENST00000485618 STPG3Q8N7X2 389 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 OR5C1Q8NGR4 320 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 OR1L4Q8NGR5 311 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 WDR89Q96FK6 387 aaPredicted RBP6.27□□□□□ -1.41
SF3A1-208ENST00000485618 SPAG8Q99932 426 aaPredicted RBP6.27□□□□□ -1.41
SF3A1-208ENST00000485618 RNF126Q9BV68 326 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 C11orf1Q9H5F2 150 aa6.27□□□□□ -1.41
SF3A1-208ENST00000485618 IGHV3OR16-8A0A075B7F1 116 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 WI2-2373I1.2A0A1W2PRP0 233 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 IGSF23A1L1A6 192 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 TSPAN4O14817 238 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 AGPAT2O15120 278 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 COX7A2P2O60397 106 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 CCNKO75909 580 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 ORM2P19652 201 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 ZNF90Q03938 601 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 VWC2Q2TAL6 325 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 BTNL8Q6UX41 500 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 OR8I2Q8N0Y5 310 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 OR1B1Q8NGR6 318 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 CHAC2Q8WUX2 184 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 GPR82Q96P67 336 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 PFDN5Q99471 154 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 ATP5SQ99766 215 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 VSIRQ9H7M9 311 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 ZFAND3Q9H8U3 227 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 AURKAIP1Q9NWT8 199 aaPredicted RBP6.26□□□□□ -1.41
SF3A1-208ENST00000485618 HIGD1AQ9Y241 93 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 WDR83OSQ9Y284 106 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 HSPB11Q9Y547 144 aa6.26□□□□□ -1.41
SF3A1-208ENST00000485618 IGKV1D-37A0A075B6S9 117 aa6.25□□□□□ -1.41
SF3A1-208ENST00000485618 IGKV1OR2-108A0A075B7D4 117 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms