RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 ZNF207O43670 478 aaKnown RBP15.1■□□□□ 0.01
COL6A2-208ENST00000485591 IL4P05112 153 aa15.1■□□□□ 0.01
COL6A2-208ENST00000485591 EGFEM1PQ0D2K5 195 aa15.1■□□□□ 0.01
COL6A2-208ENST00000485591 BEAN1Q3B7T3 259 aa15.1■□□□□ 0.01
COL6A2-208ENST00000485591 KPRPQ5T749 579 aaPredicted RBP15.1■□□□□ 0.01
COL6A2-208ENST00000485591 NOTCH3Q9UM47 2321 aa15.1■□□□□ 0.01
COL6A2-208ENST00000485591 IGHV7-4-1A0A0J9YVY3 117 aa15.09■□□□□ 0.01
COL6A2-208ENST00000485591 CYP2G1PQ6ZSU1 146 aa15.09■□□□□ 0.01
COL6A2-208ENST00000485591 DYNLRB2Q8TF09 96 aa15.09■□□□□ 0.01
COL6A2-208ENST00000485591 TECRQ9NZ01 308 aaKnown RBP15.09■□□□□ 0.01
COL6A2-208ENST00000485591 WDR83OSQ9Y284 106 aa15.09■□□□□ 0.01
COL6A2-208ENST00000485591 UBE2L5PA0A1B0GUS4 154 aa15.08■□□□□ 0
COL6A2-208ENST00000485591 WI2-2373I1.2A0A1W2PRP0 233 aa15.08■□□□□ 0
COL6A2-208ENST00000485591 CFDP00746 253 aaPredicted RBP15.08■□□□□ 0
COL6A2-208ENST00000485591 SELENOTP62341 195 aa15.08■□□□□ 0
COL6A2-208ENST00000485591 OR2F1Q13607 317 aa15.08■□□□□ 0
COL6A2-208ENST00000485591 USF2Q15853 346 aaPredicted RBP15.08■□□□□ 0
COL6A2-208ENST00000485591 OR2K2Q8NGT1 345 aa15.08■□□□□ 0
COL6A2-208ENST00000485591 RNF125Q96EQ8 232 aa15.08■□□□□ 0
COL6A2-208ENST00000485591 AQP10Q96PS8 301 aa15.08■□□□□ 0
COL6A2-208ENST00000485591 METTL26Q96S19 204 aa15.08■□□□□ 0
COL6A2-208ENST00000485591 MLXQ9UH92 298 aa15.08■□□□□ 0
COL6A2-208ENST00000485591 SMPXQ9UHP9 88 aa15.08■□□□□ 0
COL6A2-208ENST00000485591 hCG_2014768A0A024R1R8 64 aa15.07■□□□□ 0
COL6A2-208ENST00000485591 CRYBB3P26998 211 aa15.07■□□□□ 0
COL6A2-208ENST00000485591 BPIFCQ8NFQ6 507 aa15.07■□□□□ 0
COL6A2-208ENST00000485591 MGST2Q99735 147 aa15.07■□□□□ 0
COL6A2-208ENST00000485591 ZMAT5Q9UDW3 170 aaKnown RBP15.07■□□□□ 0
COL6A2-208ENST00000485591 FXYD6-FXYD2A0A087WZ82 144 aa15.06■□□□□ 0
COL6A2-208ENST00000485591 NPPCP23582 126 aa15.06■□□□□ 0
COL6A2-208ENST00000485591 NUP62P37198 522 aaPredicted RBP15.06■□□□□ 0
COL6A2-208ENST00000485591 CLINT1Q14677 625 aa15.06■□□□□ 0
COL6A2-208ENST00000485591 DEFB114Q30KQ6 69 aa15.06■□□□□ 0
COL6A2-208ENST00000485591 BTNL8Q6UX41 500 aa15.06■□□□□ 0
COL6A2-208ENST00000485591 TMEM182Q6ZP80 229 aaPredicted RBP15.06■□□□□ 0
COL6A2-208ENST00000485591 ZNF546Q86UE3 836 aa15.06■□□□□ 0
COL6A2-208ENST00000485591 ATP5SQ99766 215 aa15.06■□□□□ 0
COL6A2-208ENST00000485591 TNFSF18Q9UNG2 199 aa15.06■□□□□ 0
COL6A2-208ENST00000485591 CHEK1O14757 476 aa15.05■□□□□ -0
COL6A2-208ENST00000485591 AGPAT2O15120 278 aa15.05■□□□□ -0
COL6A2-208ENST00000485591 DFFBO76075 338 aa15.05■□□□□ -0
COL6A2-208ENST00000485591 HNRNPCP07910 306 aaKnown RBP eCLIP15.05■□□□□ -0
COL6A2-208ENST00000485591 GATA2P23769 480 aaPredicted RBP15.05■□□□□ -0
COL6A2-208ENST00000485591 BMI1P35226 326 aa15.05■□□□□ -0
COL6A2-208ENST00000485591 LYZP61626 148 aa15.05■□□□□ -0
COL6A2-208ENST00000485591 RAB31Q13636 194 aa15.05■□□□□ -0
COL6A2-208ENST00000485591 PBDC1Q9BVG4 233 aa15.05■□□□□ -0
COL6A2-208ENST00000485591 RHPN1-AS1Q9BWJ2 59 aa15.05■□□□□ -0
COL6A2-208ENST00000485591 VSIRQ9H7M9 311 aa15.05■□□□□ -0
COL6A2-208ENST00000485591 RABAC1Q9UI14 185 aa15.05■□□□□ -0
COL6A2-208ENST00000485591 IGHV3-49A0A0A0MS15 119 aa15.04■□□□□ -0
COL6A2-208ENST00000485591 SMLR1H3BR10 107 aa15.04■□□□□ -0
COL6A2-208ENST00000485591 MPDU1O75352 247 aa15.04■□□□□ -0
COL6A2-208ENST00000485591 FGF7P21781 194 aa15.04■□□□□ -0
COL6A2-208ENST00000485591 CAMLGP49069 296 aa15.04■□□□□ -0
COL6A2-208ENST00000485591 EIF2B2P49770 351 aaKnown RBP15.04■□□□□ -0
COL6A2-208ENST00000485591 KRTAP10-11P60412 298 aa15.04■□□□□ -0
COL6A2-208ENST00000485591 CD300EQ496F6 205 aaPredicted RBP15.04■□□□□ -0
COL6A2-208ENST00000485591 LCN12Q6JVE5 192 aa15.04■□□□□ -0
COL6A2-208ENST00000485591 INO80EQ8NBZ0 244 aaPredicted RBP15.04■□□□□ -0
COL6A2-208ENST00000485591 NARS2Q96I59 477 aaKnown RBP15.04■□□□□ -0
COL6A2-208ENST00000485591 ST6GAL2Q96JF0 529 aa15.04■□□□□ -0
COL6A2-208ENST00000485591 TMEM231Q9H6L2 316 aa15.04■□□□□ -0
COL6A2-208ENST00000485591 SLC45A2Q9UMX9 530 aa15.04■□□□□ -0
COL6A2-208ENST00000485591 U3KQE9 123 aa15.04■□□□□ -0
COL6A2-208ENST00000485591 A0A1W2PS18 150 aa15.03■□□□□ -0
COL6A2-208ENST00000485591 RNF222A6NCQ9 220 aa15.03■□□□□ -0
COL6A2-208ENST00000485591 APOHP02749 345 aaPredicted RBP15.03■□□□□ -0
COL6A2-208ENST00000485591 LINC00869P0C866 280 aa15.03■□□□□ -0
COL6A2-208ENST00000485591 ST8SIA2Q92186 375 aa15.03■□□□□ -0
COL6A2-208ENST00000485591 GGTLC1Q9BX51 225 aa15.03■□□□□ -0
COL6A2-208ENST00000485591 SMIM3Q9BZL3 60 aa15.03■□□□□ -0
COL6A2-208ENST00000485591 IGHV3OR16-13A0A075B7E8 117 aa15.02■□□□□ -0
COL6A2-208ENST00000485591 IGHV3-74A0A0B4J1X5 117 aa15.02■□□□□ -0
COL6A2-208ENST00000485591 A0A1B0GVG6 124 aa15.02■□□□□ -0
COL6A2-208ENST00000485591 PLP1P60201 277 aa15.02■□□□□ -0
COL6A2-208ENST00000485591 OPCMLQ14982 345 aa15.02■□□□□ -0
COL6A2-208ENST00000485591 TMEM61Q8N0U2 210 aa15.02■□□□□ -0
COL6A2-208ENST00000485591 RNF2Q99496 336 aa15.02■□□□□ -0
COL6A2-208ENST00000485591 WDR61Q9GZS3 305 aaKnown RBP15.02■□□□□ -0
COL6A2-208ENST00000485591 FBXL17Q9UF56 701 aa15.02■□□□□ -0
COL6A2-208ENST00000485591 ZNF256Q9Y2P7 627 aaPredicted RBP15.02■□□□□ -0
COL6A2-208ENST00000485591 TRAV25A0A0B4J276 109 aa15.01□□□□□ -0.01
COL6A2-208ENST00000485591 IZUMO1RA6ND01 250 aa15.01□□□□□ -0.01
COL6A2-208ENST00000485591 PRR20EP86478 221 aa15.01□□□□□ -0.01
COL6A2-208ENST00000485591 PRR20CP86479 221 aa15.01□□□□□ -0.01
COL6A2-208ENST00000485591 PRR20DP86480 221 aa15.01□□□□□ -0.01
COL6A2-208ENST00000485591 PRR20BP86481 221 aa15.01□□□□□ -0.01
COL6A2-208ENST00000485591 PRR20AP86496 221 aa15.01□□□□□ -0.01
COL6A2-208ENST00000485591 PXDC1Q5TGL8 231 aa15.01□□□□□ -0.01
COL6A2-208ENST00000485591 TCTE3Q8IZS6 198 aa15.01□□□□□ -0.01
COL6A2-208ENST00000485591 GRAMD2BQ96HH9 432 aa15.01□□□□□ -0.01
COL6A2-208ENST00000485591 NPCDR1Q9BY65 106 aa15.01□□□□□ -0.01
COL6A2-208ENST00000485591 PFDN2Q9UHV9 154 aa15.01□□□□□ -0.01
COL6A2-208ENST00000485591 SELENOKQ9Y6D0 94 aa15.01□□□□□ -0.01
COL6A2-208ENST00000485591 IGHV3-66A0A0C4DH42 116 aa15□□□□□ -0.01
COL6A2-208ENST00000485591 ARPC5O15511 151 aa15□□□□□ -0.01
COL6A2-208ENST00000485591 BUB3O43684 328 aa15□□□□□ -0.01
COL6A2-208ENST00000485591 CD5P06127 495 aa15□□□□□ -0.01
COL6A2-208ENST00000485591 ORM2P19652 201 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms