RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 C16orf54Q6UWD8 224 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 Q8NAQ8 132 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 RNASEH2CQ8TDP1 164 aaKnown RBP7.67□□□□□ -1.18
HMGN1-215ENST00000485550 C2CD4CQ8TF44 421 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 RAB40CQ96S21 281 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 PRRT1Q99946 306 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 MCUBQ9NWR8 336 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 TMEM56-RWDD3S4R434 201 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 U3KQE9 123 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 DNAH11Q96DT5 4516 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 ANKRD20A5PA0PJZ0 165 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 HELTA6NFD8 242 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 CTDSPLO15194 276 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 RD3LP0DJH9 198 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 SULT1A3P0DMM9 295 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 SULT1A4P0DMN0 295 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 SLC25A4P12235 298 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 EIF2B2P49770 351 aaKnown RBP7.66□□□□□ -1.18
HMGN1-215ENST00000485550 YPEL3P61236 119 aaPredicted RBP7.66□□□□□ -1.18
HMGN1-215ENST00000485550 MORN3Q6PF18 240 aaPredicted RBP7.66□□□□□ -1.18
HMGN1-215ENST00000485550 GSG1LQ6UXU4 331 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 LYZL2Q7Z4W2 148 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 DYNC2LI1Q8TCX1 351 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 GLMPQ8WWB7 406 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 KCNIP3Q9Y2W7 256 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 AGRNO00468 2067 aa7.66□□□□□ -1.18
HMGN1-215ENST00000485550 PRSS29PA6NIE9 313 aa7.65□□□□□ -1.18
HMGN1-215ENST00000485550 SPP1P10451 314 aa7.65□□□□□ -1.18
HMGN1-215ENST00000485550 PSG1P11464 419 aa7.65□□□□□ -1.18
HMGN1-215ENST00000485550 HLA-DMBP28068 263 aa7.65□□□□□ -1.18
HMGN1-215ENST00000485550 AP2S1P53680 142 aaPredicted RBP7.65□□□□□ -1.18
HMGN1-215ENST00000485550 NMSQ5H8A3 153 aa7.65□□□□□ -1.18
HMGN1-215ENST00000485550 ETFRF1Q6IPR1 90 aa7.65□□□□□ -1.18
HMGN1-215ENST00000485550 OR51G1Q8NGK1 321 aa7.65□□□□□ -1.18
HMGN1-215ENST00000485550 DTD1Q8TEA8 209 aa7.65□□□□□ -1.18
HMGN1-215ENST00000485550 PBDC1Q9BVG4 233 aa7.65□□□□□ -1.18
HMGN1-215ENST00000485550 RBKSQ9H477 322 aa7.65□□□□□ -1.18
HMGN1-215ENST00000485550 SCP2D1Q9UJQ7 156 aa7.65□□□□□ -1.18
HMGN1-215ENST00000485550 X6R8D5 127 aa7.65□□□□□ -1.18
HMGN1-215ENST00000485550 FABP12A6NFH5 140 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 FAM90A26D6RGX4 464 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 BUB3O43684 328 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 GSTZ1O43708 216 aaPredicted RBP7.64□□□□□ -1.19
HMGN1-215ENST00000485550 TOMM40O96008 361 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 MIFP14174 115 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 TNFSF8P32971 234 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 CCR6P51684 374 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 DEFB1P60022 68 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 SUPT4H1P63272 117 aaKnown RBP7.64□□□□□ -1.19
HMGN1-215ENST00000485550 SMCO1Q147U7 214 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 Q6ZTC4 211 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 ZNF767PQ75MW2 155 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 NOXA1Q86UR1 476 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 LGI3Q8N145 548 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 CSNK1G2-AS1Q8NCQ2 148 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 RAB2BQ8WUD1 216 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 IL22RA2Q969J5 263 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 SCGB3A2Q96PL1 93 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 MRPL18Q9H0U6 180 aaKnown RBP7.64□□□□□ -1.19
HMGN1-215ENST00000485550 CCDC59Q9P031 241 aaKnown RBP7.64□□□□□ -1.19
HMGN1-215ENST00000485550 XCL2Q9UBD3 114 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 RSL24D1Q9UHA3 163 aaKnown RBP7.64□□□□□ -1.19
HMGN1-215ENST00000485550 TBC1D24Q9ULP9 559 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 APLNQ9ULZ1 77 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 U3KQ87 197 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 PKD1P98161 4303 aa7.64□□□□□ -1.19
HMGN1-215ENST00000485550 A0A0B4J2A0 478 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 ZFP92A6NM28 416 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 ZNF705EA8MWA4 302 aaPredicted RBP7.63□□□□□ -1.19
HMGN1-215ENST00000485550 IGKV3-20P01619 116 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 TMBIM6P55061 237 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 FXYD7P58549 80 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 SNRPD3P62318 126 aaKnown RBP7.63□□□□□ -1.19
HMGN1-215ENST00000485550 ZNF90Q03938 601 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 KLF9Q13886 244 aaPredicted RBP7.63□□□□□ -1.19
HMGN1-215ENST00000485550 TMEM41BQ5BJD5 291 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 SIGLEC15Q6ZMC9 328 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 ZNF575Q86XF7 245 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 OR1S1Q8NH92 325 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 HRH4Q9H3N8 390 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 NRN1Q9NPD7 142 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 RABL2AQ9UBK7 228 aaPredicted RBP7.63□□□□□ -1.19
HMGN1-215ENST00000485550 HSPB7Q9UBY9 170 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 SHPKQ9UHJ6 478 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 PAIP2BQ9ULR5 123 aaKnown RBP7.63□□□□□ -1.19
HMGN1-215ENST00000485550 CELA1Q9UNI1 258 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 RABL2BQ9UNT1 228 aa7.63□□□□□ -1.19
HMGN1-215ENST00000485550 C11orf94C9JXX5 98 aa7.62□□□□□ -1.19
HMGN1-215ENST00000485550 H3BMM0 161 aa7.62□□□□□ -1.19
HMGN1-215ENST00000485550 RTL8CO15255 209 aa7.62□□□□□ -1.19
HMGN1-215ENST00000485550 IAPPP10997 89 aa7.62□□□□□ -1.19
HMGN1-215ENST00000485550 ANXA3P12429 323 aa7.62□□□□□ -1.19
HMGN1-215ENST00000485550 LYZP61626 148 aa7.62□□□□□ -1.19
HMGN1-215ENST00000485550 OR2F1Q13607 317 aa7.62□□□□□ -1.19
HMGN1-215ENST00000485550 GAMTQ14353 236 aa7.62□□□□□ -1.19
HMGN1-215ENST00000485550 TMED4Q7Z7H5 227 aa7.62□□□□□ -1.19
HMGN1-215ENST00000485550 CENPSQ8N2Z9 138 aa7.62□□□□□ -1.19
HMGN1-215ENST00000485550 MCFD2Q8NI22 146 aa7.62□□□□□ -1.19
HMGN1-215ENST00000485550 RNF125Q96EQ8 232 aa7.62□□□□□ -1.19
HMGN1-215ENST00000485550 LINC00052Q96N35 136 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms