RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 FAM106AQ4KMX7 169 aa13.46□□□□□ -0.25
CHMP3-207ENST00000485465 TOMM20LQ6UXN7 152 aa13.46□□□□□ -0.25
CHMP3-207ENST00000485465 TMEM182Q6ZP80 229 aaPredicted RBP13.46□□□□□ -0.25
CHMP3-207ENST00000485465 GGTLC1Q9BX51 225 aa13.46□□□□□ -0.25
CHMP3-207ENST00000485465 NPCDR1Q9BY65 106 aa13.46□□□□□ -0.25
CHMP3-207ENST00000485465 M0QZ24 198 aa13.45□□□□□ -0.26
CHMP3-207ENST00000485465 YIF1AO95070 293 aa13.45□□□□□ -0.26
CHMP3-207ENST00000485465 PF4P02776 101 aa13.45□□□□□ -0.26
CHMP3-207ENST00000485465 GATA2P23769 480 aaPredicted RBP13.45□□□□□ -0.26
CHMP3-207ENST00000485465 SYNJ2BPP57105 145 aa13.45□□□□□ -0.26
CHMP3-207ENST00000485465 OPCMLQ14982 345 aa13.45□□□□□ -0.26
CHMP3-207ENST00000485465 UNQ9165/PRO28630Q6UXU0 137 aa13.45□□□□□ -0.26
CHMP3-207ENST00000485465 C1QL4Q86Z23 238 aa13.45□□□□□ -0.26
CHMP3-207ENST00000485465 BPIFCQ8NFQ6 507 aa13.45□□□□□ -0.26
CHMP3-207ENST00000485465 OR51G1Q8NGK1 321 aa13.45□□□□□ -0.26
CHMP3-207ENST00000485465 DLX4Q92988 240 aaPredicted RBP13.45□□□□□ -0.26
CHMP3-207ENST00000485465 WI2-2373I1.2A0A1W2PRP0 233 aa13.44□□□□□ -0.26
CHMP3-207ENST00000485465 ZNF320A2RRD8 509 aa13.44□□□□□ -0.26
CHMP3-207ENST00000485465 LGALS9O00182 355 aa13.44□□□□□ -0.26
CHMP3-207ENST00000485465 CFDP00746 253 aaPredicted RBP13.44□□□□□ -0.26
CHMP3-207ENST00000485465 HNRNPCP07910 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHMP3-207ENST00000485465 RPL29P47914 159 aaKnown RBP13.44□□□□□ -0.26
CHMP3-207ENST00000485465 REC114Q7Z4M0 266 aa13.44□□□□□ -0.26
CHMP3-207ENST00000485465 ZNF709Q8N972 641 aa13.44□□□□□ -0.26
CHMP3-207ENST00000485465 TMEM190Q8WZ59 177 aa13.44□□□□□ -0.26
CHMP3-207ENST00000485465 PPP1R14BQ96C90 147 aa13.44□□□□□ -0.26
CHMP3-207ENST00000485465 RCC1LQ96I51 464 aaKnown RBP13.44□□□□□ -0.26
CHMP3-207ENST00000485465 ZFAND3Q9H8U3 227 aa13.44□□□□□ -0.26
CHMP3-207ENST00000485465 IGHV3OR16-8A0A075B7F1 116 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 C17orf112F2Z3M2 114 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 TSPAN15O95858 294 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 IL4P05112 153 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 LINC00869P0C866 280 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 PRR20EP86478 221 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 PRR20CP86479 221 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 PRR20DP86480 221 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 PRR20BP86481 221 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 PRR20AP86496 221 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 MIC13Q5XKP0 118 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 HSD17B11Q8NBQ5 300 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 RSG1Q9BU20 258 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 C20orf24Q9BUV8 137 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 ZNF471Q9BX82 626 aaPredicted RBP13.43□□□□□ -0.26
CHMP3-207ENST00000485465 ARV1Q9H2C2 271 aa13.43□□□□□ -0.26
CHMP3-207ENST00000485465 ANK2Q01484 3957 aa13.42□□□□□ -0.26
CHMP3-207ENST00000485465 C4BPBP20851 252 aa13.42□□□□□ -0.26
CHMP3-207ENST00000485465 ATP6V0CP27449 155 aa13.42□□□□□ -0.26
CHMP3-207ENST00000485465 STPG3Q8N7X2 389 aa13.42□□□□□ -0.26
CHMP3-207ENST00000485465 LINC00482Q8N8I6 264 aa13.42□□□□□ -0.26
CHMP3-207ENST00000485465 RNF125Q96EQ8 232 aa13.42□□□□□ -0.26
CHMP3-207ENST00000485465 GINS3Q9BRX5 216 aa13.42□□□□□ -0.26
CHMP3-207ENST00000485465 KCNIP2Q9NS61 270 aa13.42□□□□□ -0.26
CHMP3-207ENST00000485465 UFC1Q9Y3C8 167 aa13.42□□□□□ -0.26
CHMP3-207ENST00000485465 TIMM9Q9Y5J7 89 aa13.42□□□□□ -0.26
CHMP3-207ENST00000485465 PXMP4Q9Y6I8 212 aa13.42□□□□□ -0.26
CHMP3-207ENST00000485465 PLP1P60201 277 aa13.41□□□□□ -0.26
CHMP3-207ENST00000485465 LYZP61626 148 aa13.41□□□□□ -0.26
CHMP3-207ENST00000485465 B2MP61769 119 aa13.41□□□□□ -0.26
CHMP3-207ENST00000485465 SPATA3Q8NHX4 192 aa13.41□□□□□ -0.26
CHMP3-207ENST00000485465 GNPNAT1Q96EK6 184 aaPredicted RBP13.41□□□□□ -0.26
CHMP3-207ENST00000485465 PBDC1Q9BVG4 233 aa13.41□□□□□ -0.26
CHMP3-207ENST00000485465 SLC39A9Q9NUM3 307 aa13.41□□□□□ -0.26
CHMP3-207ENST00000485465 BOLA1Q9Y3E2 137 aa13.41□□□□□ -0.26
CHMP3-207ENST00000485465 RFNGQ9Y644 331 aa13.41□□□□□ -0.26
CHMP3-207ENST00000485465 STAB1Q9NY15 2570 aa13.41□□□□□ -0.26
CHMP3-207ENST00000485465 A8MWP6 167 aa13.4□□□□□ -0.26
CHMP3-207ENST00000485465 K7EMT4 169 aa13.4□□□□□ -0.26
CHMP3-207ENST00000485465 OVOL1O14753 267 aa13.4□□□□□ -0.26
CHMP3-207ENST00000485465 ZNF207O43670 478 aaKnown RBP13.4□□□□□ -0.26
CHMP3-207ENST00000485465 ORM2P19652 201 aa13.4□□□□□ -0.26
CHMP3-207ENST00000485465 ELLP55199 621 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-207ENST00000485465 EIF5AP63241 154 aaKnown RBP13.4□□□□□ -0.26
CHMP3-207ENST00000485465 USF2Q15853 346 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-207ENST00000485465 TM4SF20Q53R12 229 aa13.4□□□□□ -0.26
CHMP3-207ENST00000485465 Q6ZRG5 221 aa13.4□□□□□ -0.26
CHMP3-207ENST00000485465 SLC51BQ86UW2 128 aa13.4□□□□□ -0.26
CHMP3-207ENST00000485465 OR9G4Q8NGQ1 327 aa13.4□□□□□ -0.26
CHMP3-207ENST00000485465 PSMG3Q9BT73 122 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-207ENST00000485465 PEMTQ9UBM1 199 aa13.4□□□□□ -0.26
CHMP3-207ENST00000485465 HYPMO75409 117 aa13.39□□□□□ -0.27
CHMP3-207ENST00000485465 TPT1P13693 172 aaKnown RBP13.39□□□□□ -0.27
CHMP3-207ENST00000485465 PXDC1Q5TGL8 231 aa13.39□□□□□ -0.27
CHMP3-207ENST00000485465 OR1B1Q8NGR6 318 aa13.39□□□□□ -0.27
CHMP3-207ENST00000485465 STOML3Q8TAV4 291 aa13.39□□□□□ -0.27
CHMP3-207ENST00000485465 SH3BGRL3Q9H299 93 aa13.39□□□□□ -0.27
CHMP3-207ENST00000485465 DAZ1Q9NQZ3 744 aaKnown RBP13.39□□□□□ -0.27
CHMP3-207ENST00000485465 MRPL27Q9P0M9 148 aaKnown RBP13.39□□□□□ -0.27
CHMP3-207ENST00000485465 DOK5Q9P104 306 aa13.39□□□□□ -0.27
CHMP3-207ENST00000485465 TMEM213A2RRL7 107 aa13.38□□□□□ -0.27
CHMP3-207ENST00000485465 NPPCP23582 126 aa13.38□□□□□ -0.27
CHMP3-207ENST00000485465 FFAR4Q5NUL3 377 aa13.38□□□□□ -0.27
CHMP3-207ENST00000485465 IL34Q6ZMJ4 242 aa13.38□□□□□ -0.27
CHMP3-207ENST00000485465 BAP18Q8IXM2 172 aa13.38□□□□□ -0.27
CHMP3-207ENST00000485465 METTL26Q96S19 204 aa13.38□□□□□ -0.27
CHMP3-207ENST00000485465 SLC25A32Q9H2D1 315 aa13.38□□□□□ -0.27
CHMP3-207ENST00000485465 RABAC1Q9UI14 185 aa13.38□□□□□ -0.27
CHMP3-207ENST00000485465 C2orf70A6NJV1 201 aa13.37□□□□□ -0.27
CHMP3-207ENST00000485465 COX7A2P2O60397 106 aa13.37□□□□□ -0.27
CHMP3-207ENST00000485465 OR5G3P0C626 314 aa13.37□□□□□ -0.27
CHMP3-207ENST00000485465 SPP1P10451 314 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms