RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 MORN3Q6PF18 240 aaPredicted RBP11.11□□□□□ -0.63
HLA-DQB1-208ENST00000484729 SLC24A4Q8NFF2 622 aa11.11□□□□□ -0.63
HLA-DQB1-208ENST00000484729 OR1S2Q8NGQ3 325 aa11.11□□□□□ -0.63
HLA-DQB1-208ENST00000484729 OR52E5Q8NH55 327 aa11.11□□□□□ -0.63
HLA-DQB1-208ENST00000484729 DCANP1Q8TF63 244 aa11.11□□□□□ -0.63
HLA-DQB1-208ENST00000484729 GLYATL2Q8WU03 294 aa11.11□□□□□ -0.63
HLA-DQB1-208ENST00000484729 SLC25A21Q9BQT8 299 aaPredicted RBP11.11□□□□□ -0.63
HLA-DQB1-208ENST00000484729 RTBDNQ9BSG5 229 aaPredicted RBP11.11□□□□□ -0.63
HLA-DQB1-208ENST00000484729 PKD1P98161 4303 aa11.11□□□□□ -0.63
HLA-DQB1-208ENST00000484729 CRYM-AS1A6NIL9 109 aa11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 NXPH3O95157 252 aa11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 HNRNPCP07910 306 aaKnown RBP eCLIP11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 GIG44P09565 113 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 IGLC1P0CG04 106 aa11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 SLC25A4P12235 298 aa11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 OR10J1P30954 320 aa11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 DHODHQ02127 395 aa11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 DHRS2Q13268 280 aa11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 AARDQ4LEZ3 155 aa11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 TMEM41BQ5BJD5 291 aa11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 PRSS54Q6PEW0 395 aa11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 SELENOHQ8IZQ5 122 aaKnown RBP11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 RNASEH2CQ8TDP1 164 aaKnown RBP11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 Q8WTZ3 238 aa11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 GPR146Q96CH1 333 aa11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 CLEC5AQ9NY25 188 aa11.1□□□□□ -0.63
HLA-DQB1-208ENST00000484729 HELTA6NFD8 242 aa11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 C11orf94C9JXX5 98 aa11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 NDUFB6O95139 128 aa11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 RBMY1A1P0DJD3 496 aaKnown RBP11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 RBMY1CP0DJD4 496 aa11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 MIFP14174 115 aa11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 BTCP35070 178 aa11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 RBMY1FQ15415 496 aaKnown RBP11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 C2orf83Q53S99 150 aa11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 PSMG4Q5JS54 123 aa11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 MZT2BQ6NZ67 158 aa11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 ZNF575Q86XF7 245 aa11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 CENPSQ8N2Z9 138 aa11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 DYNC1H1Q14204 4646 aaKnown RBP11.09□□□□□ -0.63
HLA-DQB1-208ENST00000484729 DNAH11Q96DT5 4516 aa11.08□□□□□ -0.63
HLA-DQB1-208ENST00000484729 IGHV4-4A0A075B6R2 117 aa11.08□□□□□ -0.64
HLA-DQB1-208ENST00000484729 PLA2G10O15496 165 aa11.08□□□□□ -0.64
HLA-DQB1-208ENST00000484729 IL4P05112 153 aa11.08□□□□□ -0.64
HLA-DQB1-208ENST00000484729 NPY1RP25929 384 aa11.08□□□□□ -0.64
HLA-DQB1-208ENST00000484729 YPEL3P61236 119 aaPredicted RBP11.08□□□□□ -0.64
HLA-DQB1-208ENST00000484729 C16orf54Q6UWD8 224 aa11.08□□□□□ -0.64
HLA-DQB1-208ENST00000484729 GLMPQ8WWB7 406 aa11.08□□□□□ -0.64
HLA-DQB1-208ENST00000484729 ACY3Q96HD9 319 aa11.08□□□□□ -0.64
HLA-DQB1-208ENST00000484729 HRH4Q9H3N8 390 aa11.08□□□□□ -0.64
HLA-DQB1-208ENST00000484729 PLA2G2EQ9NZK7 142 aa11.08□□□□□ -0.64
HLA-DQB1-208ENST00000484729 KCNIP3Q9Y2W7 256 aa11.08□□□□□ -0.64
HLA-DQB1-208ENST00000484729 U3KQE9 123 aa11.08□□□□□ -0.64
HLA-DQB1-208ENST00000484729 ANXA3P12429 323 aa11.07□□□□□ -0.64
HLA-DQB1-208ENST00000484729 VAMP1P23763 118 aa11.07□□□□□ -0.64
HLA-DQB1-208ENST00000484729 HLA-DMBP28068 263 aa11.07□□□□□ -0.64
HLA-DQB1-208ENST00000484729 AP2S1P53680 142 aaPredicted RBP11.07□□□□□ -0.64
HLA-DQB1-208ENST00000484729 ASAH1Q13510 395 aa11.07□□□□□ -0.64
HLA-DQB1-208ENST00000484729 USF2Q15853 346 aaPredicted RBP11.07□□□□□ -0.64
HLA-DQB1-208ENST00000484729 ETFRF1Q6IPR1 90 aa11.07□□□□□ -0.64
HLA-DQB1-208ENST00000484729 Q6ZTC4 211 aa11.07□□□□□ -0.64
HLA-DQB1-208ENST00000484729 TMEM170AQ8WVE7 144 aa11.07□□□□□ -0.64
HLA-DQB1-208ENST00000484729 NPIPB3Q92617 1050 aa11.07□□□□□ -0.64
HLA-DQB1-208ENST00000484729 PRR13Q9NZ81 148 aa11.07□□□□□ -0.64
HLA-DQB1-208ENST00000484729 TBC1D24Q9ULP9 559 aa11.07□□□□□ -0.64
HLA-DQB1-208ENST00000484729 X6R8D5 127 aa11.07□□□□□ -0.64
HLA-DQB1-208ENST00000484729 FAM240BA0A1B0GVZ2 78 aa11.06□□□□□ -0.64
HLA-DQB1-208ENST00000484729 ZNF705EA8MWA4 302 aaPredicted RBP11.06□□□□□ -0.64
HLA-DQB1-208ENST00000484729 SULT1A3P0DMM9 295 aa11.06□□□□□ -0.64
HLA-DQB1-208ENST00000484729 SULT1A4P0DMN0 295 aa11.06□□□□□ -0.64
HLA-DQB1-208ENST00000484729 DEFA1P59665 94 aa11.06□□□□□ -0.64
HLA-DQB1-208ENST00000484729 DEFA3P59666 94 aa11.06□□□□□ -0.64
HLA-DQB1-208ENST00000484729 TMEM128Q5BJH2 165 aa11.06□□□□□ -0.64
HLA-DQB1-208ENST00000484729 NOXA1Q86UR1 476 aa11.06□□□□□ -0.64
HLA-DQB1-208ENST00000484729 ENKURQ8TC29 256 aa11.06□□□□□ -0.64
HLA-DQB1-208ENST00000484729 RAB40CQ96S21 281 aa11.06□□□□□ -0.64
HLA-DQB1-208ENST00000484729 C20orf85Q9H1P6 137 aa11.06□□□□□ -0.64
HLA-DQB1-208ENST00000484729 FLVCR2Q9UPI3 526 aa11.06□□□□□ -0.64
HLA-DQB1-208ENST00000484729 TMEM56-RWDD3S4R434 201 aa11.06□□□□□ -0.64
HLA-DQB1-208ENST00000484729 ELOA3CA0A087WX78 387 aaPredicted RBP11.05□□□□□ -0.64
HLA-DQB1-208ENST00000484729 TRAV10A0A0B4J240 114 aa11.05□□□□□ -0.64
HLA-DQB1-208ENST00000484729 FAM90A26D6RGX4 464 aa11.05□□□□□ -0.64
HLA-DQB1-208ENST00000484729 TOMM40O96008 361 aa11.05□□□□□ -0.64
HLA-DQB1-208ENST00000484729 IFNA10P01566 189 aa11.05□□□□□ -0.64
HLA-DQB1-208ENST00000484729 RD3LP0DJH9 198 aa11.05□□□□□ -0.64
HLA-DQB1-208ENST00000484729 SNRPD3P62318 126 aaKnown RBP11.05□□□□□ -0.64
HLA-DQB1-208ENST00000484729 SRPXP78539 464 aa11.05□□□□□ -0.64
HLA-DQB1-208ENST00000484729 NRN1Q9NPD7 142 aa11.05□□□□□ -0.64
HLA-DQB1-208ENST00000484729 CACFD1Q9UGQ2 172 aa11.05□□□□□ -0.64
HLA-DQB1-208ENST00000484729 TCRBP04435 133 aa11.04□□□□□ -0.64
HLA-DQB1-208ENST00000484729 UBE2MP61081 183 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-208ENST00000484729 NUTF2P61970 127 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-208ENST00000484729 SUPT4H1P63272 117 aaKnown RBP11.04□□□□□ -0.64
HLA-DQB1-208ENST00000484729 IFITM3Q01628 133 aa11.04□□□□□ -0.64
HLA-DQB1-208ENST00000484729 PPP1R1AQ13522 171 aa11.04□□□□□ -0.64
HLA-DQB1-208ENST00000484729 NMSQ5H8A3 153 aa11.04□□□□□ -0.64
HLA-DQB1-208ENST00000484729 SIGLEC15Q6ZMC9 328 aa11.04□□□□□ -0.64
HLA-DQB1-208ENST00000484729 POM121L12Q8N7R1 296 aa11.04□□□□□ -0.64
HLA-DQB1-208ENST00000484729 CSNK1G2-AS1Q8NCQ2 148 aa11.04□□□□□ -0.64
HLA-DQB1-208ENST00000484729 OR51G1Q8NGK1 321 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms