RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 WDR86Q86TI4 376 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 TMEM256Q8N2U0 113 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 ZNF439Q8NDP4 499 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 OR2Z1Q8NG97 314 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 OR10X1Q8NGY0 326 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 MRGPRDQ8TDS7 321 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 VN1R17PQ8TDU5 208 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 TSKUQ8WUA8 353 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 URB1-AS1Q96HZ7 61 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 NABP2Q9BQ15 211 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 ALKBH7Q9BT30 221 aaPredicted RBP3.82□□□□□ -1.8
SSBP1-211ENST00000484178 TMEM191AQ9H0A3 160 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 GNB4Q9HAV0 340 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 ASCL3Q9NQ33 180 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 TNFRSF19Q9NS68 423 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 ZNF492Q9P255 531 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 OR51B2Q9Y5P1 312 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 CENPFP49454 3210 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 CHD9Q3L8U1 2897 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 SHANK1Q9Y566 2161 aa3.82□□□□□ -1.8
SSBP1-211ENST00000484178 NCOA6Q14686 2063 aaPredicted RBP3.82□□□□□ -1.8
SSBP1-211ENST00000484178 TRBV20OR9-2A0A075B6H5 130 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 TRAV30A0A087WSZ9 112 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 A0A1W2PS18 150 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 hADV38S2A0JD32 116 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 PINLYPA6NC86 204 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 UPK2O00526 184 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 TNFRSF13BO14836 293 aaPredicted RBP3.81□□□□□ -1.8
SSBP1-211ENST00000484178 HYPMO75409 117 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 IGHV3-13P01766 116 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 CRYAAP02489 173 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 LIPFP07098 398 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 OR9G9P0C7N8 305 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 FAM106CPP0CH98 169 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 CGB3P0DN86 165 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 CGB7P0DN87 165 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 IGHV4-30-4P0DP06 118 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 TDGF1P13385 188 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 CCL2P13500 99 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 MYOD1P15172 320 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 USF1P22415 310 aaPredicted RBP3.81□□□□□ -1.8
SSBP1-211ENST00000484178 KRTDAPP60985 99 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 UBE2G1P62253 170 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 LRRC10Q5BKY1 277 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 MIC13Q5XKP0 118 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 SPINK14Q6IE38 97 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 Q6ZN92 141 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 SMIM15Q7Z3B0 74 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 C11orf53Q8IXP5 236 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 OR8I2Q8N0Y5 310 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 OR5T1Q8NG75 326 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 OR8B3Q8NGG8 313 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 OR13A1Q8NGR1 328 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 FAM222BQ8WU58 562 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 FMC1Q96HJ9 113 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 IGF2BP2-AS1Q96M15 143 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 OR8B2Q96RD0 313 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 CDX2Q99626 313 aaPredicted RBP3.81□□□□□ -1.8
SSBP1-211ENST00000484178 SLC25A33Q9BSK2 321 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 TMEM70Q9BUB7 260 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 IFI27L2Q9H2X8 130 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 YAE1D1Q9NRH1 226 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 CALYQ9NYX4 217 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 CLCF1Q9UBD9 225 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 HSPB8Q9UJY1 196 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 KLF12Q9Y4X4 402 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 YTHDF2Q9Y5A9 579 aaKnown RBP3.81□□□□□ -1.8
SSBP1-211ENST00000484178 PCNX3Q9H6A9 2034 aa3.81□□□□□ -1.8
SSBP1-211ENST00000484178 KIAA0100Q14667 2235 aaKnown RBP3.8□□□□□ -1.8
SSBP1-211ENST00000484178 FER1L5A0AVI2 2057 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 IGHV2OR16-5A0A0B4J2B6 119 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 SERTM2A0A1B0GWG4 89 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 NKX6-3A6NJ46 265 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 H0YJW9 148 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 K7EN84 100 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 BMPR1BO00238 502 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 PEX7O00628 323 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 COX7A2P2O60397 106 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 OR7C2O60412 319 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 CA2P00918 260 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 LHBP01229 141 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 IGHV1-2P23083 117 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 G0S2P27469 103 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 TSPOP30536 169 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 SRIP30626 198 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 FCGR2BP31994 310 aaPredicted RBP3.8□□□□□ -1.8
SSBP1-211ENST00000484178 GLRXP35754 106 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 CEACAM3P40198 252 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 CDKN1BP46527 198 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 LGALS7P47929 136 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 SEC11AP67812 179 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 UBE2L3P68036 154 aaKnown RBP3.8□□□□□ -1.8
SSBP1-211ENST00000484178 HBBP68871 147 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 RPL36AP83881 106 aaKnown RBP3.8□□□□□ -1.8
SSBP1-211ENST00000484178 COTL1Q14019 142 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 MMDQ15546 238 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 C9orf135Q5VTT2 229 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 ASCL5Q7RTU5 278 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 SPATA12Q7Z6I5 190 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 PDPNQ86YL7 162 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms