RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 ST8SIA2Q92186 375 aa6.37□□□□□ -1.39
SYNE1-225ENST00000481502 MGST2Q99735 147 aa6.37□□□□□ -1.39
SYNE1-225ENST00000481502 GGTLC1Q9BX51 225 aa6.37□□□□□ -1.39
SYNE1-225ENST00000481502 SMIM3Q9BZL3 60 aa6.37□□□□□ -1.39
SYNE1-225ENST00000481502 MRPL36Q9P0J6 103 aaKnown RBP6.37□□□□□ -1.39
SYNE1-225ENST00000481502 WI2-2373I1.2A0A1W2PRP0 233 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 OR2T8A6NH00 312 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 LINC01619G3V211 115 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 BMPR1BO00238 502 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 IFNA7P01567 189 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 CD28P10747 220 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 PSG1P11464 419 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 M6PRP20645 277 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 ATP6V0CP27449 155 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 GPR183P32249 361 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 BMI1P35226 326 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 B2MP61769 119 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 RPEL1Q2QD12 228 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 ACOT6Q3I5F7 207 aaPredicted RBP6.36□□□□□ -1.39
SYNE1-225ENST00000481502 C10orf99Q6UWK7 81 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 REC114Q7Z4M0 266 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 OR4F17Q8NGA8 305 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 DPF1Q92782 380 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 MARC2Q969Z3 335 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 OR4F4Q96R69 305 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 CITED2Q99967 270 aaPredicted RBP6.36□□□□□ -1.39
SYNE1-225ENST00000481502 CHRDL1Q9BU40 450 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 SLC39A9Q9NUM3 307 aa6.36□□□□□ -1.39
SYNE1-225ENST00000481502 A0A1W2PS18 150 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 A8MWP6 167 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 IGHV3-11P01762 117 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 LINC00869P0C866 280 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 NKX2-5P52952 324 aaPredicted RBP6.35□□□□□ -1.39
SYNE1-225ENST00000481502 KLF5Q13887 457 aaPredicted RBP6.35□□□□□ -1.39
SYNE1-225ENST00000481502 TIGITQ495A1 244 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 C1orf194Q5T5A4 169 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 C12orf54Q6X4T0 127 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 C1QL4Q86Z23 238 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 STPG3Q8N7X2 389 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 HSD17B11Q8NBQ5 300 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 KLHL30-AS1Q8NEE0 82 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 STXBP6Q8NFX7 210 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 OR11H1Q8NG94 326 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 OR1N2Q8NGR9 330 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 TMEM190Q8WZ59 177 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 NARS2Q96I59 477 aaKnown RBP6.35□□□□□ -1.39
SYNE1-225ENST00000481502 GPR82Q96P67 336 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 MRPL32Q9BYC8 188 aaKnown RBP6.35□□□□□ -1.39
SYNE1-225ENST00000481502 GNB4Q9HAV0 340 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 DNAJC4Q9NNZ3 241 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 SIGLEC8Q9NYZ4 499 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 MRPL27Q9P0M9 148 aaKnown RBP6.35□□□□□ -1.39
SYNE1-225ENST00000481502 PEMTQ9UBM1 199 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 UFC1Q9Y3C8 167 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 PXMP4Q9Y6I8 212 aa6.35□□□□□ -1.39
SYNE1-225ENST00000481502 IGHV3-21A0A0B4J1V1 117 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 NUDT19A8MXV4 375 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 SEC14L6B5MCN3 397 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 CCL24O00175 119 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 HYPMO75409 117 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 IGHV3-48P01763 117 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 CRYBB3P26998 211 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 MEOX2P50222 304 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 SULT1A2P50226 295 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 ZNF90Q03938 601 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 AKR1C8PQ5T2L2 129 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 TEX261Q6UWH6 196 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 TOMM20LQ6UXN7 152 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 LCNL1Q6ZST4 164 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 ZNF767PQ75MW2 155 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 C3orf56Q8N813 242 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 RNF141Q8WVD5 230 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 RNF125Q96EQ8 232 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 SAT2Q96F10 170 aaPredicted RBP6.34□□□□□ -1.39
SYNE1-225ENST00000481502 RSG1Q9BU20 258 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 SLC25A32Q9H2D1 315 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 TMEM231Q9H6L2 316 aa6.34□□□□□ -1.39
SYNE1-225ENST00000481502 DAZ1Q9NQZ3 744 aaKnown RBP6.34□□□□□ -1.39
SYNE1-225ENST00000481502 PUS1Q9Y606 427 aaKnown RBP eCLIP6.34□□□□□ -1.39
SYNE1-225ENST00000481502 CUBNO60494 3623 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 ANKRD34BA5PLL1 514 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 ADARB2-AS1A8MUL3 147 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 TEX46H3BTG2 121 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 IL4P05112 153 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 OR5G3P0C626 314 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 C8orf88P0DMB2 117 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 NPPCP23582 126 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 HOXD3P31249 432 aaPredicted RBP6.33□□□□□ -1.4
SYNE1-225ENST00000481502 TAS2R45P59539 299 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 RHOBP62745 196 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 BLOC1S1P78537 153 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 PMS2P11Q13670 270 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 TMEM41BQ5BJD5 291 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 KHDC1LQ5JSQ8 128 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 FFAR4Q5NUL3 377 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 MIC13Q5XKP0 118 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 GRAMD2BQ96HH9 432 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 METTL26Q96S19 204 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 ELOVL1Q9BW60 279 aa6.33□□□□□ -1.4
SYNE1-225ENST00000481502 ZFAND3Q9H8U3 227 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms