RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 FRAS1Q86XX4 4008 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 PLA2G10O15496 165 aa11.08□□□□□ -0.64
LIMS3-203ENST00000480744 AP2S1P53680 142 aaPredicted RBP11.08□□□□□ -0.64
LIMS3-203ENST00000480744 NOXA1Q86UR1 476 aa11.08□□□□□ -0.64
LIMS3-203ENST00000480744 GLMPQ8WWB7 406 aa11.08□□□□□ -0.64
LIMS3-203ENST00000480744 IGLL5B9A064 214 aa11.07□□□□□ -0.64
LIMS3-203ENST00000480744 RBMY1A1P0DJD3 496 aaKnown RBP11.07□□□□□ -0.64
LIMS3-203ENST00000480744 RBMY1CP0DJD4 496 aa11.07□□□□□ -0.64
LIMS3-203ENST00000480744 RD3LP0DJH9 198 aa11.07□□□□□ -0.64
LIMS3-203ENST00000480744 MIFP14174 115 aa11.07□□□□□ -0.64
LIMS3-203ENST00000480744 AKR1C4P17516 323 aa11.07□□□□□ -0.64
LIMS3-203ENST00000480744 RBMY1FQ15415 496 aaKnown RBP11.07□□□□□ -0.64
LIMS3-203ENST00000480744 LINC00299Q6ZSB3 139 aa11.07□□□□□ -0.64
LIMS3-203ENST00000480744 TMED4Q7Z7H5 227 aa11.07□□□□□ -0.64
LIMS3-203ENST00000480744 CENPSQ8N2Z9 138 aa11.07□□□□□ -0.64
LIMS3-203ENST00000480744 IL22RA2Q969J5 263 aa11.07□□□□□ -0.64
LIMS3-203ENST00000480744 SCGB3A2Q96PL1 93 aa11.07□□□□□ -0.64
LIMS3-203ENST00000480744 RAB40CQ96S21 281 aa11.07□□□□□ -0.64
LIMS3-203ENST00000480744 CACFD1Q9UGQ2 172 aa11.07□□□□□ -0.64
LIMS3-203ENST00000480744 C11orf94C9JXX5 98 aa11.06□□□□□ -0.64
LIMS3-203ENST00000480744 TOMM40O96008 361 aa11.06□□□□□ -0.64
LIMS3-203ENST00000480744 HLA-DMBP28068 263 aa11.06□□□□□ -0.64
LIMS3-203ENST00000480744 INPP1P49441 399 aa11.06□□□□□ -0.64
LIMS3-203ENST00000480744 SNRPD3P62318 126 aaKnown RBP11.06□□□□□ -0.64
LIMS3-203ENST00000480744 NMSQ5H8A3 153 aa11.06□□□□□ -0.64
LIMS3-203ENST00000480744 SIGLEC15Q6ZMC9 328 aa11.06□□□□□ -0.64
LIMS3-203ENST00000480744 DTD1Q8TEA8 209 aa11.06□□□□□ -0.64
LIMS3-203ENST00000480744 RBKSQ9H477 322 aa11.06□□□□□ -0.64
LIMS3-203ENST00000480744 TBC1D24Q9ULP9 559 aa11.06□□□□□ -0.64
LIMS3-203ENST00000480744 FLVCR2Q9UPI3 526 aa11.06□□□□□ -0.64
LIMS3-203ENST00000480744 X6R8D5 127 aa11.06□□□□□ -0.64
LIMS3-203ENST00000480744 A0A0B4J2A0 478 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 FAM90A26D6RGX4 464 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 NDUFB6O95139 128 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 PSG1P11464 419 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 TCTAP57738 103 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 SMCO1Q147U7 214 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 LYZL2Q7Z4W2 148 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 LGI3Q8N145 548 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 OR51G1Q8NGK1 321 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 OR1S1Q8NH92 325 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 SLC25A21Q9BQT8 299 aaPredicted RBP11.05□□□□□ -0.64
LIMS3-203ENST00000480744 CCDC32Q9BV29 185 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 PBDC1Q9BVG4 233 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 HRH4Q9H3N8 390 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 NRN1Q9NPD7 142 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 SHPKQ9UHJ6 478 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 DNAH10Q8IVF4 4471 aa11.05□□□□□ -0.64
LIMS3-203ENST00000480744 ELOA3CA0A087WX78 387 aaPredicted RBP11.04□□□□□ -0.64
LIMS3-203ENST00000480744 NAP1L6A6NFF2 107 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 ZNF705EA8MWA4 302 aaPredicted RBP11.04□□□□□ -0.64
LIMS3-203ENST00000480744 BUB3O43684 328 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 ANXA3P12429 323 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 PRR20EP86478 221 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 PRR20CP86479 221 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 PRR20DP86480 221 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 PRR20BP86481 221 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 PRR20AP86496 221 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 PPP1R1AQ13522 171 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 Q6ZTC4 211 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 RNF125Q96EQ8 232 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 HSPB7Q9UBY9 170 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 APLNQ9ULZ1 77 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 U3KQ87 197 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 VPS13DQ5THJ4 4388 aa11.04□□□□□ -0.64
LIMS3-203ENST00000480744 TRAV10A0A0B4J240 114 aa11.03□□□□□ -0.64
LIMS3-203ENST00000480744 ZFP92A6NM28 416 aa11.03□□□□□ -0.64
LIMS3-203ENST00000480744 LYRM1O43325 122 aa11.03□□□□□ -0.64
LIMS3-203ENST00000480744 NUTF2P61970 127 aaKnown RBP11.03□□□□□ -0.64
LIMS3-203ENST00000480744 SRPXP78539 464 aa11.03□□□□□ -0.64
LIMS3-203ENST00000480744 TMEM128Q5BJH2 165 aa11.03□□□□□ -0.64
LIMS3-203ENST00000480744 CSNK1G2-AS1Q8NCQ2 148 aa11.03□□□□□ -0.64
LIMS3-203ENST00000480744 S100ZQ8WXG8 99 aa11.03□□□□□ -0.64
LIMS3-203ENST00000480744 SLC35E1Q96K37 410 aa11.03□□□□□ -0.64
LIMS3-203ENST00000480744 C7orf50Q9BRJ6 194 aaKnown RBP11.03□□□□□ -0.64
LIMS3-203ENST00000480744 XCL2Q9UBD3 114 aa11.03□□□□□ -0.64
LIMS3-203ENST00000480744 IFITM3Q01628 133 aa11.02□□□□□ -0.65
LIMS3-203ENST00000480744 ZNF767PQ75MW2 155 aa11.02□□□□□ -0.65
LIMS3-203ENST00000480744 C1QTNF4Q9BXJ3 329 aa11.02□□□□□ -0.65
LIMS3-203ENST00000480744 PAIP2BQ9ULR5 123 aaKnown RBP11.02□□□□□ -0.65
LIMS3-203ENST00000480744 H3BMM0 161 aa11.01□□□□□ -0.65
LIMS3-203ENST00000480744 SFT2D2O95562 160 aa11.01□□□□□ -0.65
LIMS3-203ENST00000480744 IGKV3-20P01619 116 aa11.01□□□□□ -0.65
LIMS3-203ENST00000480744 VAMP1P23763 118 aa11.01□□□□□ -0.65
LIMS3-203ENST00000480744 NUP62P37198 522 aaPredicted RBP11.01□□□□□ -0.65
LIMS3-203ENST00000480744 LYZP61626 148 aa11.01□□□□□ -0.65
LIMS3-203ENST00000480744 ZNF90Q03938 601 aa11.01□□□□□ -0.65
LIMS3-203ENST00000480744 ZNF846Q147U1 533 aa11.01□□□□□ -0.65
LIMS3-203ENST00000480744 PPP1R14BQ96C90 147 aa11.01□□□□□ -0.65
LIMS3-203ENST00000480744 LINC00052Q96N35 136 aa11.01□□□□□ -0.65
LIMS3-203ENST00000480744 WDR12Q9GZL7 423 aaKnown RBP11.01□□□□□ -0.65
LIMS3-203ENST00000480744 SEPSECSQ9HD40 501 aaKnown RBP11.01□□□□□ -0.65
LIMS3-203ENST00000480744 PFDN2Q9UHV9 154 aa11.01□□□□□ -0.65
LIMS3-203ENST00000480744 CELA1Q9UNI1 258 aa11.01□□□□□ -0.65
LIMS3-203ENST00000480744 DNAH6Q9C0G6 4158 aa11□□□□□ -0.65
LIMS3-203ENST00000480744 IGHV4-4A0A075B6R2 117 aa11□□□□□ -0.65
LIMS3-203ENST00000480744 CENPXA8MT69 81 aa11□□□□□ -0.65
LIMS3-203ENST00000480744 UPK1BO75841 260 aa11□□□□□ -0.65
LIMS3-203ENST00000480744 IAPPP10997 89 aa11□□□□□ -0.65
LIMS3-203ENST00000480744 ANXA7P20073 488 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms