RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 RNF24Q9Y225 148 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 TNFRSF18Q9Y5U5 241 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 C9orf170A2RU37 121 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 OR4C46A6NHA9 309 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 UBE2CO00762 179 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 PLA2G10O15496 165 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 LYRM1O43325 122 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 SPRY2O43597 315 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 PRAF2O60831 178 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 TMEM50AO95807 157 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 IGKV1-17P01599 117 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 PRH1P02810 166 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 IL5P05113 134 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 IGLC1P0CG04 106 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 SPNP16150 400 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 CRYBB3P26998 211 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 GPR183P32249 361 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 INPP1P49441 399 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 HOXA1P49639 335 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-213ENST00000480102 SUMO2P61956 95 aaKnown RBP3.67□□□□□ -1.82
PTCD3-213ENST00000480102 DHRS2Q13268 280 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 PPP1R1AQ13522 171 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 SP6Q3SY56 376 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 ZNF57Q68EA5 555 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-213ENST00000480102 DGAT2L7PQ6IED9 249 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 FAAP20Q6NZ36 180 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 LYZL2Q7Z4W2 148 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 S100A7AQ86SG5 101 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 LYG2Q86SG7 212 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 OR1S2Q8NGQ3 325 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 DTD1Q8TEA8 209 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 CASTOR1Q8WTX7 329 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 GRAMD2BQ96HH9 432 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 ZNF414Q96IQ9 312 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 RAB40CQ96S21 281 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 CACNG5Q9UF02 275 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 SMPXQ9UHP9 88 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 TP53TG1Q9Y2A0 90 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 NSG2Q9Y328 171 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 TGP01266 2768 aa3.67□□□□□ -1.82
PTCD3-213ENST00000480102 TNCP24821 2201 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 TRAV14DV4A0A0A6YYC5 116 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 IGHV7-4-1A0A0J9YVY3 117 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 HELTA6NFD8 242 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 CEBPZOSA8MTT3 80 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 SNRPGP15A8MWD9 76 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 PRSS46E5RG02 174 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 SYNGR2O43760 224 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 GNG7O60262 68 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 TSC22D2O75157 780 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 IFNA21P01568 189 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 REG1AP05451 166 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 OR4E1P0C645 316 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 APELAP0DMC3 54 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 IGHV4-30-4P0DP06 118 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 NPY1RP25929 384 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 EIF2B2P49770 351 aaKnown RBP3.66□□□□□ -1.82
PTCD3-213ENST00000480102 RAB11AP62491 216 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 IL15RAQ13261 267 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 ZNF846Q147U1 533 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 TMEM41BQ5BJD5 291 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 C1orf194Q5T5A4 169 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 HIST2H2BDQ6DRA6 164 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 PRSS54Q6PEW0 395 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 UNQ9165/PRO28630Q6UXU0 137 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 Q6ZWC4 215 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 UXS1Q8NBZ7 420 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 OR4D5Q8NGN0 318 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 RNASE11Q8TAA1 199 aaKnown RBP3.66□□□□□ -1.82
PTCD3-213ENST00000480102 TMEM170AQ8WVE7 144 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 SMIM8Q96KF7 97 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 PRR25Q96S07 402 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 CHRDL1Q9BU40 450 aa3.66□□□□□ -1.82
PTCD3-213ENST00000480102 FNDC4Q9H6D8 234 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-213ENST00000480102 PLXNB1O43157 2135 aa3.65□□□□□ -1.82
PTCD3-213ENST00000480102 OR2T8A6NH00 312 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 PPP5D1E7EU14 171 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 CHEK1O14757 476 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 UPK1BO75841 260 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 TOMM40O96008 361 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 TCRBP04435 133 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 NPPCP23582 126 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 OPRK1P41145 380 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 NKX2-1P43699 371 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-213ENST00000480102 MEOX2P50222 304 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 PLP1P60201 277 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 POLR2GP62487 172 aaKnown RBP eCLIP3.65□□□□□ -1.83
PTCD3-213ENST00000480102 PAFAH1B2P68402 229 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 Q56UQ5 140 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 RNASE12Q5GAN4 147 aaKnown RBP3.65□□□□□ -1.83
PTCD3-213ENST00000480102 PXDC1Q5TGL8 231 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 GGNBP1Q5YKI7 109 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 TOMM20LQ6UXN7 152 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 RBPMS2Q6ZRY4 209 aaKnown RBP3.65□□□□□ -1.83
PTCD3-213ENST00000480102 TMED4Q7Z7H5 227 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 TMEM61Q8N0U2 210 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 THAP8Q8NA92 274 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 DYNLRB2Q8TF09 96 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 ZNF431Q8TF32 576 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-213ENST00000480102 Q8WTZ3 238 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms