RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 GNB1LQ9BYB4 327 aa8.66□□□□□ -1.02
VPS52-217ENST00000478934 IGHV2-26A0A0B4J1V2 119 aa8.65□□□□□ -1.02
VPS52-217ENST00000478934 A0A1W2PS18 150 aa8.65□□□□□ -1.02
VPS52-217ENST00000478934 GPX1P07203 203 aa8.65□□□□□ -1.02
VPS52-217ENST00000478934 MAJINQ3KP22 176 aa8.65□□□□□ -1.02
VPS52-217ENST00000478934 FBLN7Q53RD9 439 aa8.65□□□□□ -1.02
VPS52-217ENST00000478934 GDF5OSQ5U4N7 250 aa8.65□□□□□ -1.02
VPS52-217ENST00000478934 ZNF329Q86UD4 541 aa8.65□□□□□ -1.02
VPS52-217ENST00000478934 FXYD5Q96DB9 178 aa8.65□□□□□ -1.02
VPS52-217ENST00000478934 TMEM68Q96MH6 324 aa8.65□□□□□ -1.02
VPS52-217ENST00000478934 NRN1Q9NPD7 142 aa8.65□□□□□ -1.02
VPS52-217ENST00000478934 NCOR2Q9Y618 2525 aa8.65□□□□□ -1.03
VPS52-217ENST00000478934 AKAP6Q13023 2319 aa8.65□□□□□ -1.03
VPS52-217ENST00000478934 A0A1W2PRE2 83 aa8.65□□□□□ -1.03
VPS52-217ENST00000478934 M0R143 59 aa8.65□□□□□ -1.03
VPS52-217ENST00000478934 SSTP61278 116 aa8.65□□□□□ -1.03
VPS52-217ENST00000478934 LINC00311Q8N616 119 aa8.65□□□□□ -1.03
VPS52-217ENST00000478934 VAMP8Q9BV40 100 aa8.65□□□□□ -1.03
VPS52-217ENST00000478934 FBXL15Q9H469 300 aa8.65□□□□□ -1.03
VPS52-217ENST00000478934 OSTCQ9NRP0 149 aa8.65□□□□□ -1.03
VPS52-217ENST00000478934 TNFRSF19Q9NS68 423 aa8.65□□□□□ -1.03
VPS52-217ENST00000478934 LY96Q9Y6Y9 160 aa8.65□□□□□ -1.03
VPS52-217ENST00000478934 VPS13CQ709C8 3753 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 SPTBN1Q01082 2364 aaKnown RBP8.64□□□□□ -1.03
VPS52-217ENST00000478934 A0A1W2PRD5 423 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 A0A1W2PRF3 423 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 A0A1W2PRM7 423 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 APOBEC3AP31941 199 aaPredicted RBP8.64□□□□□ -1.03
VPS52-217ENST00000478934 PAFAH1B2P68402 229 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 VMA21Q3ZAQ7 101 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 LCN12Q6JVE5 192 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 VSTM2AQ8TAG5 236 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 ZNF596Q8TC21 504 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 WNK2Q9Y3S1 2297 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 MAP1AP78559 2803 aaPredicted RBP8.64□□□□□ -1.03
VPS52-217ENST00000478934 DIRC3C9JPN6 131 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 BRS3P32247 399 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 TFPI2P48307 235 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 TEX43Q6ZNM6 134 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 PNKDQ8N490 385 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 NUDT10Q8NFP7 164 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 NUDT11Q96G61 164 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 KAAG1Q9UBP8 84 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 SSUH2Q9Y2M2 353 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 INSIG2Q9Y5U4 225 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 S4R3C0 116 aa8.64□□□□□ -1.03
VPS52-217ENST00000478934 IGHV1-3A0A0C4DH29 117 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 SMIM27A0A1W2PRY6 76 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 VWC2LB2RUY7 222 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 M0QZ24 198 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 PEX7O00628 323 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 APCSP02743 223 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 AMY1AP04745 511 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 CD3EP07766 207 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 RAB4AP20338 218 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 Q0VG73 95 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 LINC00322Q6ZN03 302 aaPredicted RBP8.63□□□□□ -1.03
VPS52-217ENST00000478934 TCF24Q7RTU0 167 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 KIR3DL3Q8N743 410 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 Q8N976 141 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 VSTM5A8MXK1 200 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 IGLV1-47P01700 117 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 ZNF25P17030 456 aaPredicted RBP8.63□□□□□ -1.03
VPS52-217ENST00000478934 ZNF137PP52743 207 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 PMCHL1Q16048 86 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 MUC15Q8N387 334 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 NUP35Q8NFH5 326 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 NEU1Q99519 415 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 MRPL32Q9BYC8 188 aaKnown RBP8.63□□□□□ -1.03
VPS52-217ENST00000478934 CHODLQ9H9P2 273 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 SIGLEC9Q9Y336 463 aa8.63□□□□□ -1.03
VPS52-217ENST00000478934 CACNA1BQ00975 2339 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 TRAV9-1A0A075B6T8 112 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 PGPA6NDG6 321 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 BUB1B-PAK6H3BSN5 160 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 K7ENP7 123 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 SLC25A5P05141 298 aaKnown RBP8.62□□□□□ -1.03
VPS52-217ENST00000478934 ESDP10768 282 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 RPL27AP46776 148 aaKnown RBP8.62□□□□□ -1.03
VPS52-217ENST00000478934 SUB1P53999 127 aaKnown RBP eCLIP8.62□□□□□ -1.03
VPS52-217ENST00000478934 ATP5IP56385 69 aaPredicted RBP8.62□□□□□ -1.03
VPS52-217ENST00000478934 TMEM183BQ1AE95 376 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 THAP8Q8NA92 274 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 OR4A5Q8NH83 315 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 TSKUQ8WUA8 353 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 KCNS1Q96KK3 526 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 C19orf24Q9BVV8 132 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 ZNF331Q9NQX6 463 aaPredicted RBP8.62□□□□□ -1.03
VPS52-217ENST00000478934 TRAV8-1A0A0A6YYK1 113 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 PPIAL4CA0A0B4J2A2 164 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 SH2D7A6NKC9 451 aaPredicted RBP8.62□□□□□ -1.03
VPS52-217ENST00000478934 HIGD1CA8MV81 97 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 INS-IGF2F8WCM5 200 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 CRYGBP07316 175 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 C3orf79P0CE67 100 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 PPIAL4GP0DN37 164 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 MC5RP33032 325 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 LBHQ53QV2 105 aaPredicted RBP8.62□□□□□ -1.03
VPS52-217ENST00000478934 ONECUT1Q9UBC0 465 aa8.62□□□□□ -1.03
VPS52-217ENST00000478934 TP73-AS1Q9UF72 201 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 222.9 ms