RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 NUP155O75694 1391 aa-0.2□□□□□ -2.44
HPS3-205ENST00000478525 CACNA1HO95180 2353 aa-0.2□□□□□ -2.44
HPS3-205ENST00000478525 CECR2Q9BXF3 1484 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 ZANQ9Y493 2812 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 ANKRD17O75179 2603 aaKnown RBP-0.21□□□□□ -2.44
HPS3-205ENST00000478525 F8P00451 2351 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 MYCBP2O75592 4640 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 KIF1BO60333 1816 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 TRAV10A0A0B4J240 114 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 TINCRA0A1B0GVN0 87 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 NUPR2A6NF83 97 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 FAM159BA6NKW6 160 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 MCRIP1C9JLW8 97 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 E7EUB6 86 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 FXYD1O00168 92 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 SLC16A4O15374 487 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 BIRC5O15392 142 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 HAND1O96004 215 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 OR10J4P0C629 311 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 OCM2P0CE71 109 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 C8orf88P0DMB2 117 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 CCL1P22362 96 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 RAB5BP61020 215 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 RHOBP62745 196 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 HIST3H3Q16695 136 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 GUK1Q16774 197 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 DEFB113Q30KQ7 82 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 SPRNQ5BIV9 151 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 LRRN1Q6UXK5 716 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 ZNF833PQ6ZTB9 187 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 COMMD7Q86VX2 200 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 ANGPTL5Q86XS5 388 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 FAM9CQ8IZT9 166 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 C10orf111Q8N326 155 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 TMEM161BQ8NDZ6 487 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 GRPEL2Q8TAA5 225 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 FAM172AQ8WUF8 416 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 H1FXQ92522 213 aaKnown RBP-0.21□□□□□ -2.44
HPS3-205ENST00000478525 MUCL1Q96DR8 90 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 HIST1H2BLQ99880 126 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 SLC25A21Q9BQT8 299 aaPredicted RBP-0.21□□□□□ -2.44
HPS3-205ENST00000478525 SIKE1Q9BRV8 207 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 OR51V1Q9H2C8 321 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 MAP1LC3AQ9H492 121 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 PSTPIP2Q9H939 334 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 RNF122Q9H9V4 155 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 FBXL12Q9NXK8 326 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 TAS2R7Q9NYW3 318 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.21□□□□□ -2.44
HPS3-205ENST00000478525 CELSR1Q9NYQ6 3014 aa-0.21□□□□□ -2.44
HPS3-205ENST00000478525 FLNAP21333 2647 aaKnown RBP-0.21□□□□□ -2.44
HPS3-205ENST00000478525 HELZP42694 1942 aaKnown RBP-0.22□□□□□ -2.44
HPS3-205ENST00000478525 MED1Q15648 1581 aaPredicted RBP-0.22□□□□□ -2.44
HPS3-205ENST00000478525 A0A087WSZ3 146 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 A0A0A6YYH2 397 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 ERICH2A1L162 156 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 A6NJ64 397 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 A6NN06 94 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 PIRO00625 290 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 OR7C1O76099 320 aaPredicted RBP-0.22□□□□□ -2.44
HPS3-205ENST00000478525 CRYZL1O95825 349 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 IGKV1-5P01602 117 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 HLA-DRB1P01911 266 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 CXCL8P10145 99 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 CD79AP11912 226 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 RPL12P30050 165 aaKnown RBP-0.22□□□□□ -2.44
HPS3-205ENST00000478525 SRP14P37108 136 aaKnown RBP-0.22□□□□□ -2.44
HPS3-205ENST00000478525 CAV3P56539 151 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 NAA20P61599 178 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 SKP1P63208 163 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 EIF5AP63241 154 aaKnown RBP-0.22□□□□□ -2.44
HPS3-205ENST00000478525 CDK6Q00534 326 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 PPP1R1AQ13522 171 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 RSU1Q15404 277 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 KISS1Q15726 138 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 C1orf195Q5TG92 126 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 LYRM7Q5U5X0 104 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 SPOPLQ6IQ16 392 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 C8orf74Q6P047 294 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 VMO1Q7Z5L0 202 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 OR5AS1Q8N127 324 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 KRT222Q8N1A0 295 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 C5orf17Q8NAS9 161 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 OR5D14Q8NGL3 314 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 PLAC4Q8WY50 150 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 ZNF75CPQ92670 426 aaPredicted RBP-0.22□□□□□ -2.44
HPS3-205ENST00000478525 RMND5BQ96G75 393 aaPredicted RBP-0.22□□□□□ -2.44
HPS3-205ENST00000478525 KIFC1Q9BW19 673 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 WFDC10AQ9H1F0 79 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 BCL2L10Q9HD36 194 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 RABL2AQ9UBK7 228 aaPredicted RBP-0.22□□□□□ -2.44
HPS3-205ENST00000478525 UTP11Q9Y3A2 253 aaKnown RBP-0.22□□□□□ -2.44
HPS3-205ENST00000478525 FAM208BQ5VWN6 2430 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 HMCN2Q8NDA2 5059 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 RAD50Q92878 1312 aa-0.22□□□□□ -2.44
HPS3-205ENST00000478525 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.22□□□□□ -2.44
HPS3-205ENST00000478525 AFDNP55196 1824 aaKnown RBP-0.22□□□□□ -2.45
HPS3-205ENST00000478525 C9orf84Q5VXU9 1444 aa-0.22□□□□□ -2.45
HPS3-205ENST00000478525 NCOR1O75376 2440 aa-0.23□□□□□ -2.45
HPS3-205ENST00000478525 SPAG17Q6Q759 2223 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms