RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 TMEM222Q9H0R3 208 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 APLNQ9ULZ1 77 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 CELA1Q9UNI1 258 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 C14orf166Q9Y224 244 aaKnown RBP8.45□□□□□ -1.06
VARS2-208ENST00000477052 X6R8D5 127 aa8.45□□□□□ -1.06
VARS2-208ENST00000477052 A0A1W2PS18 150 aa8.44□□□□□ -1.06
VARS2-208ENST00000477052 NAP1L6A6NFF2 107 aa8.44□□□□□ -1.06
VARS2-208ENST00000477052 CEBPZOSA8MTT3 80 aa8.44□□□□□ -1.06
VARS2-208ENST00000477052 B3GALNT1O75752 331 aa8.44□□□□□ -1.06
VARS2-208ENST00000477052 CDS2O95674 445 aa8.44□□□□□ -1.06
VARS2-208ENST00000477052 PTTG1O95997 202 aa8.44□□□□□ -1.06
VARS2-208ENST00000477052 OR10J1P30954 320 aa8.44□□□□□ -1.06
VARS2-208ENST00000477052 USF2Q15853 346 aaPredicted RBP8.44□□□□□ -1.06
VARS2-208ENST00000477052 CHAC2Q8WUX2 184 aa8.44□□□□□ -1.06
VARS2-208ENST00000477052 GLMPQ8WWB7 406 aa8.44□□□□□ -1.06
VARS2-208ENST00000477052 NPIPB3Q92617 1050 aa8.44□□□□□ -1.06
VARS2-208ENST00000477052 ACY3Q96HD9 319 aa8.44□□□□□ -1.06
VARS2-208ENST00000477052 RAB40CQ96S21 281 aa8.44□□□□□ -1.06
VARS2-208ENST00000477052 C7orf50Q9BRJ6 194 aaKnown RBP8.44□□□□□ -1.06
VARS2-208ENST00000477052 NAA60Q9H7X0 242 aa8.44□□□□□ -1.06
VARS2-208ENST00000477052 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.44□□□□□ -1.06
VARS2-208ENST00000477052 HTR2BP41595 481 aa8.43□□□□□ -1.06
VARS2-208ENST00000477052 C16orf54Q6UWD8 224 aa8.43□□□□□ -1.06
VARS2-208ENST00000477052 CSNK1G2-AS1Q8NCQ2 148 aa8.43□□□□□ -1.06
VARS2-208ENST00000477052 Q8WTZ3 238 aa8.43□□□□□ -1.06
VARS2-208ENST00000477052 RBPMSQ93062 196 aaKnown RBP8.43□□□□□ -1.06
VARS2-208ENST00000477052 GRAMD2BQ96HH9 432 aa8.43□□□□□ -1.06
VARS2-208ENST00000477052 NARS2Q96I59 477 aaKnown RBP8.43□□□□□ -1.06
VARS2-208ENST00000477052 SLC25A21Q9BQT8 299 aaPredicted RBP8.43□□□□□ -1.06
VARS2-208ENST00000477052 U3KQE9 123 aa8.43□□□□□ -1.06
VARS2-208ENST00000477052 RPS10-NUDT3A0A1W2PQS6 291 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 HELTA6NFD8 242 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 CRYM-AS1A6NIL9 109 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 CENPXA8MT69 81 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 IGKV3-20P01619 116 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 IL4P05112 153 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 FXYD7P58549 80 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 AARDQ4LEZ3 155 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 C2orf83Q53S99 150 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 SLC24A4Q8NFF2 622 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 OR1S2Q8NGQ3 325 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 OR52E5Q8NH55 327 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 XCL2Q9UBD3 114 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 TBC1D24Q9ULP9 559 aa8.42□□□□□ -1.06
VARS2-208ENST00000477052 IGHV4-4A0A075B6R2 117 aa8.41□□□□□ -1.06
VARS2-208ENST00000477052 TRAV30A0A087WSZ9 112 aa8.41□□□□□ -1.06
VARS2-208ENST00000477052 ZNF705EA8MWA4 302 aaPredicted RBP8.41□□□□□ -1.06
VARS2-208ENST00000477052 FAM90A26D6RGX4 464 aa8.41□□□□□ -1.06
VARS2-208ENST00000477052 RGS13O14921 159 aa8.41□□□□□ -1.06
VARS2-208ENST00000477052 SPP1P10451 314 aa8.41□□□□□ -1.06
VARS2-208ENST00000477052 MIFP14174 115 aa8.41□□□□□ -1.06
VARS2-208ENST00000477052 NPY1RP25929 384 aa8.41□□□□□ -1.06
VARS2-208ENST00000477052 MORN3Q6PF18 240 aaPredicted RBP8.41□□□□□ -1.06
VARS2-208ENST00000477052 FAM219AQ8IW50 185 aa8.41□□□□□ -1.06
VARS2-208ENST00000477052 OR51G1Q8NGK1 321 aa8.41□□□□□ -1.06
VARS2-208ENST00000477052 HECTD4Q9Y4D8 3996 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 KIAA1109Q2LD37 5005 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 LINC00854A0A1B0GVQ3 168 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 PLA2G10O15496 165 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 LYRM1O43325 122 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 SCGB2A1O75556 95 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 UPK1BO75841 260 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 NDUFB6O95139 128 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 IFNA10P01566 189 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 RD3LP0DJH9 198 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 PSG1P11464 419 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 SLC25A4P12235 298 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 BTCP35070 178 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 CCR6P51684 374 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 YPEL3P61236 119 aaPredicted RBP8.4□□□□□ -1.06
VARS2-208ENST00000477052 C12orf74Q32Q52 190 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 GDF5OSQ5U4N7 250 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 LYZL2Q7Z4W2 148 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 RNASEH2CQ8TDP1 164 aaKnown RBP8.4□□□□□ -1.06
VARS2-208ENST00000477052 PBDC1Q9BVG4 233 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 HRH4Q9H3N8 390 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 RBKSQ9H477 322 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 KCNIP3Q9Y2W7 256 aa8.4□□□□□ -1.06
VARS2-208ENST00000477052 DNAH6Q9C0G6 4158 aa8.4□□□□□ -1.07
VARS2-208ENST00000477052 IGHV3OR16-12A0A075B7B8 117 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 TRAV10A0A0B4J240 114 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 C11orf94C9JXX5 98 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 H3BMM0 161 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 BUB3O43684 328 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 SULT1A3P0DMM9 295 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 SULT1A4P0DMN0 295 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 AKR1C4P17516 323 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 EMP1P54849 157 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 SUPT4H1P63272 117 aaKnown RBP8.39□□□□□ -1.07
VARS2-208ENST00000477052 ZNF90Q03938 601 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 TMEM128Q5BJH2 165 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 NMSQ5H8A3 153 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 SIGLEC15Q6ZMC9 328 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 NRN1Q9NPD7 142 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 TMEM56-RWDD3S4R434 201 aa8.39□□□□□ -1.07
VARS2-208ENST00000477052 DEFB131BA0A096LNP1 70 aa8.38□□□□□ -1.07
VARS2-208ENST00000477052 TOMM40O96008 361 aa8.38□□□□□ -1.07
VARS2-208ENST00000477052 UBE2MP61081 183 aaKnown RBP8.38□□□□□ -1.07
VARS2-208ENST00000477052 SNRPD3P62318 126 aaKnown RBP8.38□□□□□ -1.07
VARS2-208ENST00000477052 OR2F1Q13607 317 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms