RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 H3BMM0 161 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 GSTZ1O43708 216 aaPredicted RBP5.05□□□□□ -1.6
HDAC3-207ENST00000475549 PITX3O75364 302 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 TOMM40O96008 361 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 MIFP14174 115 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 NPY1RP25929 384 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 TNFSF8P32971 234 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 AP2S1P53680 142 aaPredicted RBP5.05□□□□□ -1.6
HDAC3-207ENST00000475549 IL18Q14116 193 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 GAMTQ14353 236 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 MORN3Q6PF18 240 aaPredicted RBP5.05□□□□□ -1.6
HDAC3-207ENST00000475549 ZNF767PQ75MW2 155 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 CLVS1Q8IUQ0 354 aaPredicted RBP5.05□□□□□ -1.6
HDAC3-207ENST00000475549 OR51G1Q8NGK1 321 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 IL22RA2Q969J5 263 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 ACY3Q96HD9 319 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 PRRT1Q99946 306 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 MRPS26Q9BYN8 205 aaKnown RBP5.05□□□□□ -1.6
HDAC3-207ENST00000475549 RBKSQ9H477 322 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 NRN1Q9NPD7 142 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 HSPB7Q9UBY9 170 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 TBC1D24Q9ULP9 559 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 U3KQ87 197 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 PCLOQ9Y6V0 5065 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 IGKV1OR2-108A0A075B7D4 117 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 A0A0B4J2A0 478 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 C11orf94C9JXX5 98 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 SOCS3O14543 225 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 IFNA10P01566 189 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 SULT1A3P0DMM9 295 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 SULT1A4P0DMN0 295 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 AKR1C4P17516 323 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 CCR6P51684 374 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 TMBIM6P55061 237 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 TNP2Q05952 138 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 KLF9Q13886 244 aaPredicted RBP5.04□□□□□ -1.6
HDAC3-207ENST00000475549 SMCO1Q147U7 214 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 TMEM41BQ5BJD5 291 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 ETFRF1Q6IPR1 90 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 SIGLEC15Q6ZMC9 328 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 ZNF705AQ6ZN79 300 aaPredicted RBP5.04□□□□□ -1.6
HDAC3-207ENST00000475549 LGI3Q8N145 548 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 DTD1Q8TEA8 209 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 RAB2BQ8WUD1 216 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 SEPSECSQ9HD40 501 aaKnown RBP5.04□□□□□ -1.6
HDAC3-207ENST00000475549 CCDC59Q9P031 241 aaKnown RBP5.04□□□□□ -1.6
HDAC3-207ENST00000475549 XCL2Q9UBD3 114 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 SHPKQ9UHJ6 478 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 KCNIP3Q9Y2W7 256 aa5.04□□□□□ -1.6
HDAC3-207ENST00000475549 IGHV4-4A0A075B6R2 117 aa5.03□□□□□ -1.6
HDAC3-207ENST00000475549 FABP12A6NFH5 140 aa5.03□□□□□ -1.6
HDAC3-207ENST00000475549 H3BMQ9 156 aa5.03□□□□□ -1.6
HDAC3-207ENST00000475549 HLA-DRB4P13762 266 aa5.03□□□□□ -1.6
HDAC3-207ENST00000475549 TCTAP57738 103 aa5.03□□□□□ -1.6
HDAC3-207ENST00000475549 TMEM182Q6ZP80 229 aaPredicted RBP5.03□□□□□ -1.6
HDAC3-207ENST00000475549 ZNF709Q8N972 641 aa5.03□□□□□ -1.6
HDAC3-207ENST00000475549 TRIM63Q969Q1 353 aa5.03□□□□□ -1.6
HDAC3-207ENST00000475549 RNF125Q96EQ8 232 aa5.03□□□□□ -1.6
HDAC3-207ENST00000475549 NARS2Q96I59 477 aaKnown RBP5.03□□□□□ -1.6
HDAC3-207ENST00000475549 MCUBQ9NWR8 336 aa5.03□□□□□ -1.6
HDAC3-207ENST00000475549 SCP2D1Q9UJQ7 156 aa5.03□□□□□ -1.6
HDAC3-207ENST00000475549 HLA-DRB4X5D2U9 266 aa5.03□□□□□ -1.6
HDAC3-207ENST00000475549 DNAH2Q9P225 4427 aa5.03□□□□□ -1.61
HDAC3-207ENST00000475549 TRAV10A0A0B4J240 114 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 ZNF705FA8MVS1 300 aaPredicted RBP5.02□□□□□ -1.61
HDAC3-207ENST00000475549 PRSS46E5RG02 174 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 F6UB75 175 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 SCGB2A1O75556 95 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 IGKV3-20P01619 116 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 ZNF705DP0CH99 300 aaPredicted RBP5.02□□□□□ -1.61
HDAC3-207ENST00000475549 ZNF705BP0CI00 300 aaPredicted RBP5.02□□□□□ -1.61
HDAC3-207ENST00000475549 GPX4P36969 197 aaPredicted RBP5.02□□□□□ -1.61
HDAC3-207ENST00000475549 NKX2-1P43699 371 aaPredicted RBP5.02□□□□□ -1.61
HDAC3-207ENST00000475549 EIF2B2P49770 351 aaKnown RBP5.02□□□□□ -1.61
HDAC3-207ENST00000475549 FXYD7P58549 80 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 SNRPD3P62318 126 aaKnown RBP5.02□□□□□ -1.61
HDAC3-207ENST00000475549 OR2F1Q13607 317 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 ZNF79Q15937 498 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 C20orf173Q96LM9 149 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 LINC00052Q96N35 136 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 PBDC1Q9BVG4 233 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 SAV1Q9H4B6 383 aaPredicted RBP5.02□□□□□ -1.61
HDAC3-207ENST00000475549 RABL2AQ9UBK7 228 aaPredicted RBP5.02□□□□□ -1.61
HDAC3-207ENST00000475549 RSL24D1Q9UHA3 163 aaKnown RBP5.02□□□□□ -1.61
HDAC3-207ENST00000475549 RABL2BQ9UNT1 228 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 V9GYH0 126 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 FAT2Q9NYQ8 4349 aa5.02□□□□□ -1.61
HDAC3-207ENST00000475549 AGRNO00468 2067 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 DEFB131BA0A096LNP1 70 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 A0A1B0GVY2 172 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 ZFP92A6NM28 416 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 SNRPGP15A8MWD9 76 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 PRM2P04554 102 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 GATA2P23769 480 aaPredicted RBP5.01□□□□□ -1.61
HDAC3-207ENST00000475549 ATP5IP56385 69 aaPredicted RBP5.01□□□□□ -1.61
HDAC3-207ENST00000475549 TMEM128Q5BJH2 165 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 OR8G2PQ6IF36 304 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 TMED4Q7Z7H5 227 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 NOXA1Q86UR1 476 aa5.01□□□□□ -1.61
HDAC3-207ENST00000475549 C1orf158Q8N1D5 194 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms