RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ACOT6Q3I5F7 207 aaPredicted RBP12.03□□□□□ -0.48
CPSF3-203ENST00000475482 ACSM6Q6P461 480 aa12.03□□□□□ -0.48
CPSF3-203ENST00000475482 ZNF355PQ9NSJ1 428 aa12.03□□□□□ -0.48
CPSF3-203ENST00000475482 GAR1Q9NY12 217 aaKnown RBP12.03□□□□□ -0.48
CPSF3-203ENST00000475482 ZMAT5Q9UDW3 170 aaKnown RBP12.03□□□□□ -0.48
CPSF3-203ENST00000475482 PFDN2Q9UHV9 154 aa12.03□□□□□ -0.48
CPSF3-203ENST00000475482 TRAV30A0A087WSZ9 112 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 ZFP92A6NM28 416 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 I3L2K1 104 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 BRI3O95415 125 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 RND2P52198 227 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 TMEM41BQ5BJD5 291 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 FFAR4Q5NUL3 377 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 C9orf66Q5T8R8 295 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 THAP8Q8NA92 274 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 NECAP1Q8NC96 275 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 OR1N2Q8NGR9 330 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 OR4X1Q8NH49 305 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 VN1R17PQ8TDU5 208 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 NPIPB3Q92617 1050 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 CXorf58Q96LI9 332 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 MGST2Q99735 147 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 TXN2Q99757 166 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 GGTLC1Q9BX51 225 aa12.02□□□□□ -0.49
CPSF3-203ENST00000475482 MFAP4P55083 255 aa12.01□□□□□ -0.49
CPSF3-203ENST00000475482 ZNF616Q08AN1 781 aa12.01□□□□□ -0.49
CPSF3-203ENST00000475482 MLANAQ16655 118 aa12.01□□□□□ -0.49
CPSF3-203ENST00000475482 Q6ZRG5 221 aa12.01□□□□□ -0.49
CPSF3-203ENST00000475482 FAM213BQ8TBF2 198 aa12.01□□□□□ -0.49
CPSF3-203ENST00000475482 FANCD2OSQ96PS1 177 aa12.01□□□□□ -0.49
CPSF3-203ENST00000475482 TRGV9Q99603 122 aa12.01□□□□□ -0.49
CPSF3-203ENST00000475482 FBXL7Q9UJT9 491 aa12.01□□□□□ -0.49
CPSF3-203ENST00000475482 DMRT1Q9Y5R6 373 aa12.01□□□□□ -0.49
CPSF3-203ENST00000475482 PXMP4Q9Y6I8 212 aa12.01□□□□□ -0.49
CPSF3-203ENST00000475482 LINC00862A6NCI5 91 aa12□□□□□ -0.49
CPSF3-203ENST00000475482 FAM223BA6NKX1 122 aa12□□□□□ -0.49
CPSF3-203ENST00000475482 K7EIM0 57 aa12□□□□□ -0.49
CPSF3-203ENST00000475482 CLN5O75503 358 aa12□□□□□ -0.49
CPSF3-203ENST00000475482 M6PRP20645 277 aa12□□□□□ -0.49
CPSF3-203ENST00000475482 OR10J1P30954 320 aa12□□□□□ -0.49
CPSF3-203ENST00000475482 ELLP55199 621 aaPredicted RBP12□□□□□ -0.49
CPSF3-203ENST00000475482 B2MP61769 119 aa12□□□□□ -0.49
CPSF3-203ENST00000475482 C19orf35Q6ZS72 473 aa12□□□□□ -0.49
CPSF3-203ENST00000475482 CYP2G1PQ6ZSU1 146 aa12□□□□□ -0.49
CPSF3-203ENST00000475482 FAM223AQ8IWN6 122 aa12□□□□□ -0.49
CPSF3-203ENST00000475482 MED9Q9NWA0 146 aa12□□□□□ -0.49
CPSF3-203ENST00000475482 TRBV9A0A0B4J1U6 114 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 SEC14L6B5MCN3 397 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 GNG7O60262 68 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 OR2J3O76001 311 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 HBE1P02100 147 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 LGALS1P09382 135 aaKnown RBP11.99□□□□□ -0.49
CPSF3-203ENST00000475482 FCGR2BP31994 310 aaPredicted RBP11.99□□□□□ -0.49
CPSF3-203ENST00000475482 INSL3P51460 131 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 PXDC1Q5TGL8 231 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 STPG3Q8N7X2 389 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 OR10G4Q8NGN3 311 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 OR10G9Q8NGN4 311 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 OR10G7Q8NGN6 311 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 OR5B12Q96R08 314 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 ATP6V0BQ99437 205 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 ACTR3CQ9C0K3 210 aaPredicted RBP11.99□□□□□ -0.49
CPSF3-203ENST00000475482 SLC39A9Q9NUM3 307 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 C21orf62Q9NYP8 219 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 SLC45A2Q9UMX9 530 aa11.99□□□□□ -0.49
CPSF3-203ENST00000475482 TRBV7-1A0A0A6YYK4 115 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 H2AFB1P0C5Y9 115 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 RHOGP84095 191 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 PRR20EP86478 221 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 PRR20CP86479 221 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 PRR20DP86480 221 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 PRR20BP86481 221 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 PRR20AP86496 221 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 MIC13Q5XKP0 118 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 BPIFCQ8NFQ6 507 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 EEF1AKMT3Q96AZ1 226 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 USMG5Q96IX5 58 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 RNF2Q99496 336 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 RPRMQ9NS64 109 aa11.98□□□□□ -0.49
CPSF3-203ENST00000475482 IGKV1OR2-108A0A075B7D4 117 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 IGHV3-21A0A0B4J1V1 117 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 A0A0G2JLM5 398 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 A0A1W2PPV4 95 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 LINC01619G3V211 115 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 NDUFB8O95169 186 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 IGHV3-48P01763 117 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 TRGV3P03979 118 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 ATP5G2Q06055 141 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 C15orf32Q32M92 178 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 Q56UQ5 140 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 DEFB121Q5J5C9 76 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 FAM209BQ5JX69 171 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 S100A7AQ86SG5 101 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 OR1L4Q8NGR5 311 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 PCNPQ8WW12 178 aaKnown RBP11.97□□□□□ -0.49
CPSF3-203ENST00000475482 DLX4Q92988 240 aaPredicted RBP11.97□□□□□ -0.49
CPSF3-203ENST00000475482 PFDN5Q99471 154 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 B9D2Q9BPU9 175 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 PLA2G2EQ9NZK7 142 aa11.97□□□□□ -0.49
CPSF3-203ENST00000475482 RFNGQ9Y644 331 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms