RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 H3BUT2 72 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 DUSP14O95147 198 aaKnown RBP3.91□□□□□ -1.78
NPHP3-206ENST00000474871 IGKV1D-16P01601 117 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 LGALS1P09382 135 aaKnown RBP3.91□□□□□ -1.78
NPHP3-206ENST00000474871 SNRPGP62308 76 aaKnown RBP3.91□□□□□ -1.78
NPHP3-206ENST00000474871 RPL7L1Q6DKI1 246 aaKnown RBP3.91□□□□□ -1.78
NPHP3-206ENST00000474871 HMGN2P46Q86SG4 172 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 LINC00526Q96FQ7 95 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 PRELID3AQ96N28 172 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 RIF1Q5UIP0 2472 aaKnown RBP3.91□□□□□ -1.78
NPHP3-206ENST00000474871 TRAV27A0A087WT01 109 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 CECR9P0C854 216 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 CRYGAP11844 174 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 PEBP1P30086 187 aaKnown RBP3.91□□□□□ -1.78
NPHP3-206ENST00000474871 TPPP2P59282 170 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 Q499Y3 187 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 Q71RC1 249 aaPredicted RBP3.91□□□□□ -1.78
NPHP3-206ENST00000474871 PRIMA1Q86XR5 153 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 DEFB108BQ8NET1 73 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 OR8B3Q8NGG8 313 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 PATE1Q8WXA2 126 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 ODF3Q96PU9 254 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 OR8B2Q96RD0 313 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 OCIAD1Q9NX40 245 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 DNAJB12Q9NXW2 375 aaKnown RBP3.91□□□□□ -1.78
NPHP3-206ENST00000474871 WASHC3Q9Y3C0 194 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 KLF12Q9Y4X4 402 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 DHRS3O75911 302 aa3.9□□□□□ -1.78
NPHP3-206ENST00000474871 IGLV3-19P01714 112 aa3.9□□□□□ -1.78
NPHP3-206ENST00000474871 HOXD3P31249 432 aaPredicted RBP3.9□□□□□ -1.78
NPHP3-206ENST00000474871 SEC11AP67812 179 aa3.9□□□□□ -1.78
NPHP3-206ENST00000474871 UNQ9165/PRO28630Q6UXU0 137 aa3.9□□□□□ -1.78
NPHP3-206ENST00000474871 SEM1Q6ZVN7 128 aa3.9□□□□□ -1.78
NPHP3-206ENST00000474871 RTN4IP1Q8WWV3 396 aaPredicted RBP3.9□□□□□ -1.78
NPHP3-206ENST00000474871 AK3Q9UIJ7 227 aa3.9□□□□□ -1.78
NPHP3-206ENST00000474871 SPCS1Q9Y6A9 102 aa3.9□□□□□ -1.78
NPHP3-206ENST00000474871 FAM186AA6NE01 2351 aa3.9□□□□□ -1.78
NPHP3-206ENST00000474871 GTF3C1Q12789 2109 aa3.9□□□□□ -1.78
NPHP3-206ENST00000474871 A0A1W2PS18 150 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 GRIFINA4D1Z8 144 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 C5orf49A4QMS7 147 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 M0R1X1 148 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 HBE1P02100 147 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 CBLN1P23435 193 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 PSMB8P28062 276 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 ATXN7L3Q14CW9 347 aaPredicted RBP3.9□□□□□ -1.79
NPHP3-206ENST00000474871 LYRM7Q5U5X0 104 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 CFAP126Q5VTH2 177 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 EBLN2Q6P2I7 272 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 FAM231DQ6ZW35 169 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 OR2A1Q8NGT9 310 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 PGLYRP3Q96LB9 341 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 FOXB1Q99853 325 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 DNAH14Q0VDD8 3507 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 RBAKDNA6NC62 111 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 GGTLC3B5MD39 225 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 E9PLD3 99 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 KLF7O75840 302 aaPredicted RBP3.9□□□□□ -1.79
NPHP3-206ENST00000474871 ATP5LO75964 103 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 CA2P00918 260 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 IGHG2P01859 326 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 IGHV4-34P06331 123 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 TAS2R45P59539 299 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 C12orf73Q69YU5 71 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 AMTNQ6UX39 209 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 MYOZ3Q8TDC0 251 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 TMEM230Q96A57 120 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 CLEC7AQ9BXN2 247 aa3.9□□□□□ -1.79
NPHP3-206ENST00000474871 TMEM262E9PQX1 116 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 CCL24O00175 119 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 SLC17A2O00624 439 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 NAPSAO96009 420 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 NGFP01138 241 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 GATA1P15976 413 aaPredicted RBP3.89□□□□□ -1.79
NPHP3-206ENST00000474871 LOXL1Q08397 574 aaPredicted RBP3.89□□□□□ -1.79
NPHP3-206ENST00000474871 VAX1Q5SQQ9 334 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 OR52N5Q8NH56 324 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 CLDND2Q8NHS1 167 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 CCL4L1Q8NHW4 92 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 RBMXL1Q96E39 390 aaKnown RBP3.89□□□□□ -1.79
NPHP3-206ENST00000474871 WDYHV1Q96HA8 205 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 LINC01600Q96MT4 127 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 OR2A5Q96R48 311 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 AICDAQ9GZX7 198 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 SVILO95425 2214 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 A0A0J9YW62 118 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 C4orf51C9J302 202 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 ISLRO14498 428 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 PTGDSP41222 190 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 ETDBQ3ZM63 59 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 SERTAD4-AS1Q5TG53 156 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 MRGPREQ86SM8 312 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 IGFBPL1Q8WX77 278 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 TMEM37Q8WXS4 190 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 ZNF318Q5VUA4 2279 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 RBFOX3A6NFN3 312 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 PLXNB1O43157 2135 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 IGHV3-9P01782 118 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 OR2T6Q8NHC8 308 aa3.89□□□□□ -1.79
NPHP3-206ENST00000474871 FLVCR1-AS1Q8TAF5 88 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms