RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 NPVFQ9HCQ7 196 aa12.72□□□□□ -0.37
SCAF11-206ENST00000474828 PAIP2BQ9ULR5 123 aaKnown RBP12.72□□□□□ -0.37
SCAF11-206ENST00000474828 DNAH9Q9NYC9 4486 aa12.71□□□□□ -0.37
SCAF11-206ENST00000474828 IGSF23A1L1A6 192 aa12.71□□□□□ -0.37
SCAF11-206ENST00000474828 FAM24AA6NFZ4 105 aa12.71□□□□□ -0.37
SCAF11-206ENST00000474828 ZFP92A6NM28 416 aa12.71□□□□□ -0.37
SCAF11-206ENST00000474828 E5RGE8 158 aa12.71□□□□□ -0.37
SCAF11-206ENST00000474828 ZNF207O43670 478 aaKnown RBP12.71□□□□□ -0.37
SCAF11-206ENST00000474828 APOHP02749 345 aaPredicted RBP12.71□□□□□ -0.37
SCAF11-206ENST00000474828 FABP1P07148 127 aa12.71□□□□□ -0.37
SCAF11-206ENST00000474828 NPPCP23582 126 aa12.71□□□□□ -0.37
SCAF11-206ENST00000474828 P2RY1P47900 373 aa12.71□□□□□ -0.37
SCAF11-206ENST00000474828 SULT1A1P50225 295 aa12.71□□□□□ -0.37
SCAF11-206ENST00000474828 S100A10P60903 97 aa12.71□□□□□ -0.37
SCAF11-206ENST00000474828 USF2Q15853 346 aaPredicted RBP12.71□□□□□ -0.37
SCAF11-206ENST00000474828 OR8G2PQ6IF36 304 aa12.71□□□□□ -0.37
SCAF11-206ENST00000474828 SPAG8Q99932 426 aaPredicted RBP12.71□□□□□ -0.37
SCAF11-206ENST00000474828 OR5AC2Q9NZP5 309 aa12.71□□□□□ -0.37
SCAF11-206ENST00000474828 MPC2O95563 127 aa12.7□□□□□ -0.38
SCAF11-206ENST00000474828 RLN2P04090 185 aa12.7□□□□□ -0.38
SCAF11-206ENST00000474828 CAV2P51636 162 aa12.7□□□□□ -0.38
SCAF11-206ENST00000474828 FCN2Q15485 313 aa12.7□□□□□ -0.38
SCAF11-206ENST00000474828 LILRB2Q8N423 598 aa12.7□□□□□ -0.38
SCAF11-206ENST00000474828 RNF125Q96EQ8 232 aa12.7□□□□□ -0.38
SCAF11-206ENST00000474828 METTL26Q96S19 204 aa12.7□□□□□ -0.38
SCAF11-206ENST00000474828 RNF2Q99496 336 aa12.7□□□□□ -0.38
SCAF11-206ENST00000474828 SLC45A2Q9UMX9 530 aa12.7□□□□□ -0.38
SCAF11-206ENST00000474828 A0A1W2PS18 150 aa12.69□□□□□ -0.38
SCAF11-206ENST00000474828 IL4P05112 153 aa12.69□□□□□ -0.38
SCAF11-206ENST00000474828 S100A11P31949 105 aa12.69□□□□□ -0.38
SCAF11-206ENST00000474828 BMI1P35226 326 aa12.69□□□□□ -0.38
SCAF11-206ENST00000474828 PLP1P60201 277 aa12.69□□□□□ -0.38
SCAF11-206ENST00000474828 RRAS2P62070 204 aaPredicted RBP12.69□□□□□ -0.38
SCAF11-206ENST00000474828 LAMTOR1Q6IAA8 161 aa12.69□□□□□ -0.38
SCAF11-206ENST00000474828 MRAPQ8TCY5 172 aa12.69□□□□□ -0.38
SCAF11-206ENST00000474828 CHAC2Q8WUX2 184 aa12.69□□□□□ -0.38
SCAF11-206ENST00000474828 ST8SIA2Q92186 375 aa12.69□□□□□ -0.38
SCAF11-206ENST00000474828 FAM110AQ9BQ89 295 aa12.69□□□□□ -0.38
SCAF11-206ENST00000474828 MED28Q9H204 178 aa12.69□□□□□ -0.38
SCAF11-206ENST00000474828 C19orf73Q9NVV2 129 aa12.69□□□□□ -0.38
SCAF11-206ENST00000474828 TRAV2A0A0B4J234 112 aa12.68□□□□□ -0.38
SCAF11-206ENST00000474828 BUB3O43684 328 aa12.68□□□□□ -0.38
SCAF11-206ENST00000474828 HNRNPCP07910 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
SCAF11-206ENST00000474828 SELENOTP62341 195 aa12.68□□□□□ -0.38
SCAF11-206ENST00000474828 AKR1C1Q04828 323 aa12.68□□□□□ -0.38
SCAF11-206ENST00000474828 SLC38A11Q08AI6 406 aa12.68□□□□□ -0.38
SCAF11-206ENST00000474828 TEPPQ6URK8 271 aa12.68□□□□□ -0.38
SCAF11-206ENST00000474828 TMEM182Q6ZP80 229 aaPredicted RBP12.68□□□□□ -0.38
SCAF11-206ENST00000474828 STPG3Q8N7X2 389 aa12.68□□□□□ -0.38
SCAF11-206ENST00000474828 TMEM231Q9H6L2 316 aa12.68□□□□□ -0.38
SCAF11-206ENST00000474828 CST7O76096 145 aa12.67□□□□□ -0.38
SCAF11-206ENST00000474828 PET100P0DJ07 73 aa12.67□□□□□ -0.38
SCAF11-206ENST00000474828 EIF2B2P49770 351 aaKnown RBP12.67□□□□□ -0.38
SCAF11-206ENST00000474828 BCAP31P51572 246 aa12.67□□□□□ -0.38
SCAF11-206ENST00000474828 BAXQ07812 192 aa12.67□□□□□ -0.38
SCAF11-206ENST00000474828 ATP6V1FQ16864 119 aa12.67□□□□□ -0.38
SCAF11-206ENST00000474828 C16orf54Q6UWD8 224 aa12.67□□□□□ -0.38
SCAF11-206ENST00000474828 RBPMS2Q6ZRY4 209 aaKnown RBP12.67□□□□□ -0.38
SCAF11-206ENST00000474828 STX12Q86Y82 276 aa12.67□□□□□ -0.38
SCAF11-206ENST00000474828 GLMPQ8WWB7 406 aa12.67□□□□□ -0.38
SCAF11-206ENST00000474828 WDR83OSQ9Y284 106 aa12.67□□□□□ -0.38
SCAF11-206ENST00000474828 SMAD5-AS1Q9Y6J3 95 aa12.67□□□□□ -0.38
SCAF11-206ENST00000474828 GIPP09681 153 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-206ENST00000474828 NUP62P37198 522 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-206ENST00000474828 HBG1P69891 147 aa12.66□□□□□ -0.38
SCAF11-206ENST00000474828 HBG2P69892 147 aa12.66□□□□□ -0.38
SCAF11-206ENST00000474828 EWSR1Q01844 656 aaKnown RBP eCLIP12.66□□□□□ -0.38
SCAF11-206ENST00000474828 LRRC37A5PQ49AS3 106 aa12.66□□□□□ -0.38
SCAF11-206ENST00000474828 CYP2G1PQ6ZSU1 146 aa12.66□□□□□ -0.38
SCAF11-206ENST00000474828 SLC25A31Q9H0C2 315 aa12.66□□□□□ -0.38
SCAF11-206ENST00000474828 RABAC1Q9UI14 185 aa12.66□□□□□ -0.38
SCAF11-206ENST00000474828 COL7A1Q02388 2944 aa12.65□□□□□ -0.38
SCAF11-206ENST00000474828 IGHV3-49A0A0A0MS15 119 aa12.65□□□□□ -0.38
SCAF11-206ENST00000474828 C1orf194Q5T5A4 169 aa12.65□□□□□ -0.38
SCAF11-206ENST00000474828 LINC00322Q6ZN03 302 aaPredicted RBP12.65□□□□□ -0.38
SCAF11-206ENST00000474828 TCF24Q7RTU0 167 aa12.65□□□□□ -0.38
SCAF11-206ENST00000474828 GTSCR1Q86UQ5 136 aa12.65□□□□□ -0.38
SCAF11-206ENST00000474828 BPIFCQ8NFQ6 507 aa12.65□□□□□ -0.38
SCAF11-206ENST00000474828 B9D2Q9BPU9 175 aa12.65□□□□□ -0.38
SCAF11-206ENST00000474828 NEURL2Q9BR09 285 aa12.65□□□□□ -0.38
SCAF11-206ENST00000474828 TMEM147Q9BVK8 224 aa12.65□□□□□ -0.38
SCAF11-206ENST00000474828 UQCC1Q9NVA1 299 aa12.65□□□□□ -0.38
SCAF11-206ENST00000474828 IGHV3OR16-13A0A075B7E8 117 aa12.64□□□□□ -0.39
SCAF11-206ENST00000474828 IGHV3-74A0A0B4J1X5 117 aa12.64□□□□□ -0.39
SCAF11-206ENST00000474828 DFFBO76075 338 aa12.64□□□□□ -0.39
SCAF11-206ENST00000474828 CD7P09564 240 aa12.64□□□□□ -0.39
SCAF11-206ENST00000474828 RAP2BP61225 183 aa12.64□□□□□ -0.39
SCAF11-206ENST00000474828 NHLH2Q02577 135 aa12.64□□□□□ -0.39
SCAF11-206ENST00000474828 GUCA2BQ16661 112 aa12.64□□□□□ -0.39
SCAF11-206ENST00000474828 PXDC1Q5TGL8 231 aa12.64□□□□□ -0.39
SCAF11-206ENST00000474828 TMEM217Q8N7C4 229 aa12.64□□□□□ -0.39
SCAF11-206ENST00000474828 GRAMD2BQ96HH9 432 aa12.64□□□□□ -0.39
SCAF11-206ENST00000474828 NARS2Q96I59 477 aaKnown RBP12.64□□□□□ -0.39
SCAF11-206ENST00000474828 MGST2Q99735 147 aa12.64□□□□□ -0.39
SCAF11-206ENST00000474828 MBD2Q9UBB5 411 aa12.64□□□□□ -0.39
SCAF11-206ENST00000474828 SMCO3A2RU48 225 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 OR4C46A6NHA9 309 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 AGPAT2O15120 278 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 LINC00869P0C866 280 aa12.63□□□□□ -0.39
SCAF11-206ENST00000474828 IGHV4-30-4P0DP06 118 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms