RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 OR7C2O60412 319 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF324O75467 553 aaPredicted RBP2.64□□□□□ -1.99
BRCA1-212ENST00000473961 TYMSP04818 313 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 OR10J4P0C629 311 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 ESDP10768 282 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 KCNE1P15382 129 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 AKR1C4P17516 323 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 IL3RAP26951 378 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 SRP14P37108 136 aaKnown RBP2.64□□□□□ -1.99
BRCA1-212ENST00000473961 GABRA2P47869 451 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 CCL23P55773 120 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 ERVS71-1P61550 626 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 ABCA11PQ4W5N1 156 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 LINC00483Q53H64 154 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 TOMM20LQ6UXN7 152 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 SHISA6Q6ZSJ9 500 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 DEFB128Q7Z7B8 93 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 KRTAP11-1Q8IUC1 163 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 SGPP2Q8IWX5 399 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 SELENOHQ8IZQ5 122 aaKnown RBP2.64□□□□□ -1.99
BRCA1-212ENST00000473961 ZCCHC24Q8N2G6 241 aaKnown RBP2.64□□□□□ -1.99
BRCA1-212ENST00000473961 TCTEX1D1Q8N7M0 179 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 NECAP1Q8NC96 275 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 OR51D1Q8NGF3 324 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 OR11L1Q8NGX0 322 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF563Q8TA94 476 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 RTN4IP1Q8WWV3 396 aaPredicted RBP2.64□□□□□ -1.99
BRCA1-212ENST00000473961 SLAMF6Q96DU3 332 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 OR7D2Q96RA2 312 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 RNF5Q99942 180 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 PLEKHF2Q9H8W4 249 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 WFDC1Q9HC57 220 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 COL16A1Q07092 1604 aaPredicted RBP2.64□□□□□ -1.99
BRCA1-212ENST00000473961 NINQ8N4C6 2090 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 MYO10Q9HD67 2058 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 COL4A4P53420 1690 aaPredicted RBP2.63□□□□□ -1.99
BRCA1-212ENST00000473961 COL5A3P25940 1745 aaPredicted RBP2.63□□□□□ -1.99
BRCA1-212ENST00000473961 TRAV40A0A0B4J280 105 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 CCL15-CCL14A0A0B4J2E2 113 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 A0A1W2PRS3 328 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 MEIS3P1A6NDR6 274 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 OR6C6A6NF89 314 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 CD300LBA8K4G0 201 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF850A8MQ14 1090 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 HMGN4O00479 90 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 DEDDO75618 318 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 MT-CO2P00403 227 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 REG1AP05451 166 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 PIRTP0C851 137 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 SMIM17P0DL12 118 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 IGLC2P0DOY2 106 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 IGLC3P0DOY3 106 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 CTSEP14091 401 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF708P17019 499 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 S100A10P60903 97 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF117Q03924 483 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 CD164Q04900 197 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 EBI3Q14213 229 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 CCL15Q16663 113 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 TMEM249Q2WGJ8 235 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 PLPPR5Q32ZL2 321 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 ARHGAP11BQ3KRB8 267 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 TRMT12Q53H54 448 aaKnown RBP2.63□□□□□ -1.99
BRCA1-212ENST00000473961 FAM222AQ5U5X8 452 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF880Q6PDB4 577 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 FAM151BQ6UXP7 276 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 FAM19A1Q7Z5A9 133 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 C1orf174Q8IYL3 243 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 TMEM86AQ8N2M4 240 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 TMEM156Q8N614 296 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 OR5H2Q8NGV7 314 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 OR2T10Q8NGZ9 312 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 OR5AK3PQ8NH89 298 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 FAM213BQ8TBF2 198 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 PSMF1Q92530 271 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 DDIT4LQ96D03 193 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 GNPNAT1Q96EK6 184 aaPredicted RBP2.63□□□□□ -1.99
BRCA1-212ENST00000473961 OR2V2Q96R30 315 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 SIGMAR1Q99720 223 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 RSPO3Q9BXY4 272 aaPredicted RBP2.63□□□□□ -1.99
BRCA1-212ENST00000473961 ZNF586Q9NXT0 402 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 INSIG2Q9Y5U4 225 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 C2orf16Q68DN1 1984 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 BRWD3Q6RI45 1802 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 CCDC88CQ9P219 2028 aa2.63□□□□□ -1.99
BRCA1-212ENST00000473961 NACAE9PAV3 2078 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 NUP214P35658 2090 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-212ENST00000473961 IGHV2-26A0A0B4J1V2 119 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 KIR2DS1A0A191URI9 304 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 IGLC7A0M8Q6 106 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 CPSF4LA6NMK7 179 aaKnown RBP2.62□□□□□ -1.99
BRCA1-212ENST00000473961 TMEM212A6NML5 194 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 OR11H12B2RN74 326 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 H7BYZ3 331 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 HCRTO43612 131 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 HYPMO75409 117 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 EPPINO95925 133 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 HRASP01112 189 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 IGLV2-8P01709 118 aa2.62□□□□□ -1.99
BRCA1-212ENST00000473961 IGKV3-11P04433 115 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms