RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 KRASP01116 189 aa2.53□□□□□ -2
XRN1-209ENST00000472625 FABP1P07148 127 aa2.53□□□□□ -2
XRN1-209ENST00000472625 SPART-AS1P0CW21 52 aa2.53□□□□□ -2
XRN1-209ENST00000472625 SLC25A4P12235 298 aa2.53□□□□□ -2
XRN1-209ENST00000472625 TBPP20226 339 aa2.53□□□□□ -2
XRN1-209ENST00000472625 HLA-DMBP28068 263 aa2.53□□□□□ -2
XRN1-209ENST00000472625 RCVRNP35243 200 aa2.53□□□□□ -2
XRN1-209ENST00000472625 OPRK1P41145 380 aa2.53□□□□□ -2
XRN1-209ENST00000472625 RPL5P46777 297 aaKnown RBP2.53□□□□□ -2
XRN1-209ENST00000472625 ALDH3B2P48448 385 aa2.53□□□□□ -2
XRN1-209ENST00000472625 AKR1C2P52895 323 aa2.53□□□□□ -2
XRN1-209ENST00000472625 AQP4P55087 323 aa2.53□□□□□ -2
XRN1-209ENST00000472625 DEFB131AP59861 70 aa2.53□□□□□ -2
XRN1-209ENST00000472625 HSPE1P61604 102 aaKnown RBP2.53□□□□□ -2
XRN1-209ENST00000472625 TSPAN5P62079 268 aa2.53□□□□□ -2
XRN1-209ENST00000472625 EWSR1Q01844 656 aaKnown RBP eCLIP2.53□□□□□ -2
XRN1-209ENST00000472625 RNF212Q495C1 297 aa2.53□□□□□ -2
XRN1-209ENST00000472625 UBE2NLQ5JXB2 153 aa2.53□□□□□ -2
XRN1-209ENST00000472625 IDNKQ5T6J7 187 aa2.53□□□□□ -2
XRN1-209ENST00000472625 UBE2UQ5VVX9 321 aa2.53□□□□□ -2
XRN1-209ENST00000472625 ETFRF1Q6IPR1 90 aa2.53□□□□□ -2
XRN1-209ENST00000472625 DHRS11Q6UWP2 260 aa2.53□□□□□ -2
XRN1-209ENST00000472625 C19orf35Q6ZS72 473 aa2.53□□□□□ -2
XRN1-209ENST00000472625 TRPT1Q86TN4 253 aaKnown RBP2.53□□□□□ -2
XRN1-209ENST00000472625 FAM219AQ8IW50 185 aa2.53□□□□□ -2
XRN1-209ENST00000472625 CCDC71LQ8N9Z2 235 aa2.53□□□□□ -2
XRN1-209ENST00000472625 C15orf53Q8NAA6 179 aa2.53□□□□□ -2
XRN1-209ENST00000472625 STXBP6Q8NFX7 210 aa2.53□□□□□ -2
XRN1-209ENST00000472625 OR10W1Q8NGF6 305 aa2.53□□□□□ -2
XRN1-209ENST00000472625 OR1S2Q8NGQ3 325 aa2.53□□□□□ -2
XRN1-209ENST00000472625 RNASE11Q8TAA1 199 aaKnown RBP2.53□□□□□ -2
XRN1-209ENST00000472625 C15orf40Q8WUR7 153 aa2.53□□□□□ -2
XRN1-209ENST00000472625 PINX1Q96BK5 328 aaKnown RBP2.53□□□□□ -2
XRN1-209ENST00000472625 RRNAD1Q96FB5 475 aaKnown RBP2.53□□□□□ -2
XRN1-209ENST00000472625 ZNF414Q96IQ9 312 aa2.53□□□□□ -2
XRN1-209ENST00000472625 CYYR1Q96J86 154 aa2.53□□□□□ -2
XRN1-209ENST00000472625 ZNF2Q9BSG1 426 aaPredicted RBP2.53□□□□□ -2
XRN1-209ENST00000472625 AUNIPQ9H7T9 357 aa2.53□□□□□ -2
XRN1-209ENST00000472625 SCPEP1Q9HB40 452 aa2.53□□□□□ -2
XRN1-209ENST00000472625 TXNL4BQ9NX01 149 aaKnown RBP2.53□□□□□ -2
XRN1-209ENST00000472625 RAB26Q9ULW5 256 aa2.53□□□□□ -2
XRN1-209ENST00000472625 APLNQ9ULZ1 77 aa2.53□□□□□ -2
XRN1-209ENST00000472625 TMED3Q9Y3Q3 217 aa2.53□□□□□ -2
XRN1-209ENST00000472625 PUS1Q9Y606 427 aaKnown RBP eCLIP2.53□□□□□ -2
XRN1-209ENST00000472625 HSPG2P98160 4391 aa2.53□□□□□ -2
XRN1-209ENST00000472625 DNAH5Q8TE73 4624 aa2.53□□□□□ -2
XRN1-209ENST00000472625 IGHV3OR16-8A0A075B7F1 116 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 SMIM31A0A1B0GVY4 71 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 ZNF207O43670 478 aaKnown RBP2.52□□□□□ -2.01
XRN1-209ENST00000472625 SSX5O60225 188 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 CLN5O75503 358 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 PGLYRP1O75594 196 aaPredicted RBP2.52□□□□□ -2.01
XRN1-209ENST00000472625 GAS8-AS1O95177 125 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 CRYBB3P26998 211 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 PRSS3P35030 304 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 G6PCP35575 357 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 ID1P41134 155 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 HTR2BP41595 481 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 LPAR6P43657 344 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 P2RY1P47900 373 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 MEOX2P50222 304 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 ATP5IP56385 69 aaPredicted RBP2.52□□□□□ -2.01
XRN1-209ENST00000472625 B2MP61769 119 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 OXA1LQ15070 435 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 IZUMO4Q1ZYL8 232 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 ACTL10Q5JWF8 245 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 TMEM268Q5VZI3 342 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 LEMD1Q68G75 181 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 TOMM20LQ6UXN7 152 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 IZUMO2Q6UXV1 221 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 S100A7AQ86SG5 101 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 GBGT1Q8N5D6 347 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 ARRDC1Q8N5I2 433 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 SLC24A4Q8NFF2 622 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 OR4X1Q8NH49 305 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 ZFAND1Q8TCF1 268 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 RNASEH2CQ8TDP1 164 aaKnown RBP2.52□□□□□ -2.01
XRN1-209ENST00000472625 Q8WTZ3 238 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 FCAMRQ8WWV6 532 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 AP3S1Q92572 193 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 TMEM230Q96A57 120 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 CNBD2Q96M20 576 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 YTHDF1Q9BYJ9 559 aaKnown RBP2.52□□□□□ -2.01
XRN1-209ENST00000472625 NRN1Q9NPD7 142 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 GOLT1BQ9Y3E0 138 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 RFNGQ9Y644 331 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 PKD1P98161 4303 aa2.52□□□□□ -2.01
XRN1-209ENST00000472625 IGHV3-21A0A0B4J1V1 117 aa2.51□□□□□ -2.01
XRN1-209ENST00000472625 TRAV3A0A0B4J244 114 aa2.51□□□□□ -2.01
XRN1-209ENST00000472625 LOC100506127A0A0U1RQW1 187 aa2.51□□□□□ -2.01
XRN1-209ENST00000472625 A0A1B0GVY2 172 aa2.51□□□□□ -2.01
XRN1-209ENST00000472625 K7EQG2 157 aa2.51□□□□□ -2.01
XRN1-209ENST00000472625 CDK2AP2O75956 126 aa2.51□□□□□ -2.01
XRN1-209ENST00000472625 TNFAIP8O95379 198 aa2.51□□□□□ -2.01
XRN1-209ENST00000472625 CFDP00746 253 aaPredicted RBP2.51□□□□□ -2.01
XRN1-209ENST00000472625 HBE1P02100 147 aa2.51□□□□□ -2.01
XRN1-209ENST00000472625 CD74P04233 296 aa2.51□□□□□ -2.01
XRN1-209ENST00000472625 ZNF688P0C7X2 276 aa2.51□□□□□ -2.01
XRN1-209ENST00000472625 HLA-DRB4P13762 266 aa2.51□□□□□ -2.01
XRN1-209ENST00000472625 SDC2P34741 201 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms