RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 ATP5IP56385 69 aaPredicted RBP6.58□□□□□ -1.36
USF1-204ENST00000472217 PPP1R1AQ13522 171 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 GAMTQ14353 236 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 PSMG4Q5JS54 123 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 CENPSQ8N2Z9 138 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 OR51G1Q8NGK1 321 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 PHLDA1Q8WV24 401 aaPredicted RBP6.58□□□□□ -1.36
USF1-204ENST00000472217 RNF125Q96EQ8 232 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 SLC35E1Q96K37 410 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 PBDC1Q9BVG4 233 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 SRRQ9GZT4 340 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 KLK5Q9Y337 293 aaPredicted RBP6.58□□□□□ -1.36
USF1-204ENST00000472217 TMED3Q9Y3Q3 217 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 LYSTQ99698 3801 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 ZFP92A6NM28 416 aa6.57□□□□□ -1.36
USF1-204ENST00000472217 FAM90A26D6RGX4 464 aa6.57□□□□□ -1.36
USF1-204ENST00000472217 SFT2D2O95562 160 aa6.57□□□□□ -1.36
USF1-204ENST00000472217 LY6G6CO95867 125 aa6.57□□□□□ -1.36
USF1-204ENST00000472217 SPP1P10451 314 aa6.57□□□□□ -1.36
USF1-204ENST00000472217 GPX4P36969 197 aaPredicted RBP6.57□□□□□ -1.36
USF1-204ENST00000472217 NANOS2P60321 138 aaKnown RBP6.57□□□□□ -1.36
USF1-204ENST00000472217 ZNF90Q03938 601 aa6.57□□□□□ -1.36
USF1-204ENST00000472217 ACTL10Q5JWF8 245 aa6.57□□□□□ -1.36
USF1-204ENST00000472217 SPANXN2Q5MJ10 180 aa6.57□□□□□ -1.36
USF1-204ENST00000472217 MORN3Q6PF18 240 aaPredicted RBP6.57□□□□□ -1.36
USF1-204ENST00000472217 SIGLEC15Q6ZMC9 328 aa6.57□□□□□ -1.36
USF1-204ENST00000472217 Q8NAQ8 132 aa6.57□□□□□ -1.36
USF1-204ENST00000472217 MAGT1Q9H0U3 335 aa6.57□□□□□ -1.36
USF1-204ENST00000472217 NRN1Q9NPD7 142 aa6.57□□□□□ -1.36
USF1-204ENST00000472217 IGKV1OR2-108A0A075B7D4 117 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 PRSS46E5RG02 174 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 WRBO00258 174 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 SYNGR2O43760 224 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 HOXB5P09067 269 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 LYZP61626 148 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 SNRPD3P62318 126 aaKnown RBP6.56□□□□□ -1.36
USF1-204ENST00000472217 RAB11AP62491 216 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 BAK1Q16611 211 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 TMEM41BQ5BJD5 291 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 GGNBP1Q5YKI7 109 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 OR8G2PQ6IF36 304 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 C11orf45Q8TAV5 145 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 RAB40CQ96S21 281 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 MFFQ9GZY8 342 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 FBXL17Q9UF56 701 aa6.56□□□□□ -1.36
USF1-204ENST00000472217 PAIP2BQ9ULR5 123 aaKnown RBP6.56□□□□□ -1.36
USF1-204ENST00000472217 SACSQ9NZJ4 4579 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 IGHV4-28A0A0C4DH34 117 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 C9orf170A2RU37 121 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 ZNF705EA8MWA4 302 aaPredicted RBP6.55□□□□□ -1.36
USF1-204ENST00000472217 MED6O75586 246 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 ADAP1O75689 374 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 NDUFB6O95139 128 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 FABP1P07148 127 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 RBMY1A1P0DJD3 496 aaKnown RBP6.55□□□□□ -1.36
USF1-204ENST00000472217 RBMY1CP0DJD4 496 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 NUP62P37198 522 aaPredicted RBP6.55□□□□□ -1.36
USF1-204ENST00000472217 INPP1P49441 399 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 UBE2MP61081 183 aaKnown RBP6.55□□□□□ -1.36
USF1-204ENST00000472217 OR2F1Q13607 317 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 RBMY1FQ15415 496 aaKnown RBP6.55□□□□□ -1.36
USF1-204ENST00000472217 TRIQKQ629K1 86 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 THAP8Q8NA92 274 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 CSNK1G2-AS1Q8NCQ2 148 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 CIB3Q96Q77 187 aaPredicted RBP6.55□□□□□ -1.36
USF1-204ENST00000472217 TRGV9Q99603 122 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 SDHCQ99643 169 aaPredicted RBP6.55□□□□□ -1.36
USF1-204ENST00000472217 CLEC5AQ9NY25 188 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 PFDN2Q9UHV9 154 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 FLVCR2Q9UPI3 526 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 X6R8D5 127 aa6.55□□□□□ -1.36
USF1-204ENST00000472217 HYDINQ4G0P3 5121 aa6.54□□□□□ -1.36
USF1-204ENST00000472217 DNAH1Q9P2D7 4330 aa6.54□□□□□ -1.36
USF1-204ENST00000472217 LINC00854A0A1B0GVQ3 168 aa6.54□□□□□ -1.36
USF1-204ENST00000472217 NAP1L6A6NFF2 107 aa6.54□□□□□ -1.36
USF1-204ENST00000472217 SNRPGP15A8MWD9 76 aa6.54□□□□□ -1.36
USF1-204ENST00000472217 H3BMM0 161 aa6.54□□□□□ -1.36
USF1-204ENST00000472217 H3BP45 60 aa6.54□□□□□ -1.36
USF1-204ENST00000472217 MIFP14174 115 aa6.54□□□□□ -1.36
USF1-204ENST00000472217 BTCP35070 178 aa6.54□□□□□ -1.36
USF1-204ENST00000472217 RPP30P78346 268 aaKnown RBP6.54□□□□□ -1.36
USF1-204ENST00000472217 GSG1LQ6UXU4 331 aa6.54□□□□□ -1.36
USF1-204ENST00000472217 WDR12Q9GZL7 423 aaKnown RBP6.54□□□□□ -1.36
USF1-204ENST00000472217 HRH4Q9H3N8 390 aa6.54□□□□□ -1.36
USF1-204ENST00000472217 SEPSECSQ9HD40 501 aaKnown RBP6.54□□□□□ -1.36
USF1-204ENST00000472217 EPPK1P58107 5090 aaKnown RBP6.53□□□□□ -1.36
USF1-204ENST00000472217 AGRNO00468 2067 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 SOCS3O14543 225 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 OR4E1P0C645 316 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 HLA-DRB4P13762 266 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 NKX2-1P43699 371 aaPredicted RBP6.53□□□□□ -1.36
USF1-204ENST00000472217 DEFB1P60022 68 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 NUTF2P61970 127 aaKnown RBP6.53□□□□□ -1.36
USF1-204ENST00000472217 POLR2GP62487 172 aaKnown RBP eCLIP6.53□□□□□ -1.36
USF1-204ENST00000472217 ID3Q02535 119 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 SPANXN5Q5MJ07 72 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 C1orf194Q5T5A4 169 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 GDF5OSQ5U4N7 250 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 ACOT7LQ6ZUV0 252 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 COQ8AQ8NI60 647 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms