RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 GSTZ1O43708 216 aaPredicted RBP5.81□□□□□ -1.48
USP48-207ENST00000471752 IGKV3-20P01619 116 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 HNRNPCP07910 306 aaKnown RBP eCLIP5.81□□□□□ -1.48
USP48-207ENST00000471752 RD3LP0DJH9 198 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 CMC4P56277 68 aaPredicted RBP5.81□□□□□ -1.48
USP48-207ENST00000471752 YPEL3P61236 119 aaPredicted RBP5.81□□□□□ -1.48
USP48-207ENST00000471752 OR2F1Q13607 317 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 GAMTQ14353 236 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 SLC24A4Q8NFF2 622 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 OR1S2Q8NGQ3 325 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 Q8WTZ3 238 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 C20orf173Q96LM9 149 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 C6orf62Q9GZU0 229 aaPredicted RBP5.81□□□□□ -1.48
USP48-207ENST00000471752 MAGT1Q9H0U3 335 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 MCUBQ9NWR8 336 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 HSPG2P98160 4391 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 DNAH5Q8TE73 4624 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 TRAV2A0A0B4J234 112 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 A0A1W2PS18 150 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 H3BMM0 161 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 PITX3O75364 302 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 ATG12O94817 140 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 TOMM40O96008 361 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 IFNA10P01566 189 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 SULT1A3P0DMM9 295 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 SULT1A4P0DMN0 295 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 IAPPP10997 89 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 GATA2P23769 480 aaPredicted RBP5.8□□□□□ -1.48
USP48-207ENST00000471752 NPY1RP25929 384 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 SSBP1Q04837 148 aaKnown RBP5.8□□□□□ -1.48
USP48-207ENST00000471752 KLF9Q13886 244 aaPredicted RBP5.8□□□□□ -1.48
USP48-207ENST00000471752 IGFL4Q6B9Z1 124 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 LGI3Q8N145 548 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 RNASEH2CQ8TDP1 164 aaKnown RBP5.8□□□□□ -1.48
USP48-207ENST00000471752 DTD1Q8TEA8 209 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 C2CD4CQ8TF44 421 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 GRAMD2BQ96HH9 432 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 PBDC1Q9BVG4 233 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 HSPB7Q9UBY9 170 aa5.8□□□□□ -1.48
USP48-207ENST00000471752 HELTA6NFD8 242 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 FABP12A6NFH5 140 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 CORTO00230 105 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 SOCS3O14543 225 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 IFNA4P05014 189 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 SURF2Q15527 256 aaPredicted RBP5.79□□□□□ -1.48
USP48-207ENST00000471752 ZNF79Q15937 498 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 SIGLEC15Q6ZMC9 328 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 TMEM217Q8N7C4 229 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 TRIM63Q969Q1 353 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 LINC00052Q96N35 136 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 PRRT1Q99946 306 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 SLC35B3Q9H1N7 401 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 CCDC59Q9P031 241 aaKnown RBP5.79□□□□□ -1.48
USP48-207ENST00000471752 TBC1D24Q9ULP9 559 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 V9GYH0 126 aa5.79□□□□□ -1.48
USP48-207ENST00000471752 APOBP04114 4563 aaKnown RBP5.78□□□□□ -1.48
USP48-207ENST00000471752 TRAV30A0A087WSZ9 112 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 A0A0B4J2A0 478 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 PRSS46E5RG02 174 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 B3GALNT1O75752 331 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 CCNKO75909 580 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 CD5P06127 495 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 ZNF705DP0CH99 300 aaPredicted RBP5.78□□□□□ -1.48
USP48-207ENST00000471752 ZNF705BP0CI00 300 aaPredicted RBP5.78□□□□□ -1.48
USP48-207ENST00000471752 SLC25A4P12235 298 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 CCR6P51684 374 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 EMP1P54849 157 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 TMBIM6P55061 237 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 MRPS10P82664 201 aaKnown RBP5.78□□□□□ -1.48
USP48-207ENST00000471752 SMCO1Q147U7 214 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 TMED4Q7Z7H5 227 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 ZNF709Q8N972 641 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 OR1S1Q8NH92 325 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 MCFD2Q8NI22 146 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 RAB2BQ8WUD1 216 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 C15orf40Q8WUR7 153 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 IL22RA2Q969J5 263 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 RNF125Q96EQ8 232 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 TMEM231Q9H6L2 316 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 NRN1Q9NPD7 142 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 SHPKQ9UHJ6 478 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 FLVCR2Q9UPI3 526 aa5.78□□□□□ -1.48
USP48-207ENST00000471752 IGHV4-4A0A075B6R2 117 aa5.77□□□□□ -1.49
USP48-207ENST00000471752 IGHV3OR16-12A0A075B7B8 117 aa5.77□□□□□ -1.49
USP48-207ENST00000471752 RPS10-NUDT3A0A1W2PQS6 291 aa5.77□□□□□ -1.49
USP48-207ENST00000471752 M0R2N4 97 aa5.77□□□□□ -1.49
USP48-207ENST00000471752 HOXB5P09067 269 aa5.77□□□□□ -1.49
USP48-207ENST00000471752 LYZP61626 148 aa5.77□□□□□ -1.49
USP48-207ENST00000471752 PPP1R1AQ13522 171 aa5.77□□□□□ -1.49
USP48-207ENST00000471752 PYDC2Q56P42 97 aa5.77□□□□□ -1.49
USP48-207ENST00000471752 XP32Q5T750 250 aa5.77□□□□□ -1.49
USP48-207ENST00000471752 C1orf158Q8N1D5 194 aa5.77□□□□□ -1.49
USP48-207ENST00000471752 MFFQ9GZY8 342 aa5.77□□□□□ -1.49
USP48-207ENST00000471752 PAIP2BQ9ULR5 123 aaKnown RBP5.77□□□□□ -1.49
USP48-207ENST00000471752 KCNIP3Q9Y2W7 256 aa5.77□□□□□ -1.49
USP48-207ENST00000471752 U3KQ87 197 aa5.77□□□□□ -1.49
USP48-207ENST00000471752 TRAV8-2A0A0B4J237 113 aa5.76□□□□□ -1.49
USP48-207ENST00000471752 ZFP92A6NM28 416 aa5.76□□□□□ -1.49
USP48-207ENST00000471752 H3BP45 60 aa5.76□□□□□ -1.49
USP48-207ENST00000471752 WRBO00258 174 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms