RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 CRYBB3P26998 211 aa11.4□□□□□ -0.58
SNX13-205ENST00000471744 NUP62P37198 522 aaPredicted RBP11.4□□□□□ -0.58
SNX13-205ENST00000471744 HBG1P69891 147 aa11.4□□□□□ -0.58
SNX13-205ENST00000471744 HBG2P69892 147 aa11.4□□□□□ -0.58
SNX13-205ENST00000471744 TMEM61Q8N0U2 210 aa11.4□□□□□ -0.58
SNX13-205ENST00000471744 PPP1R1CQ8WVI7 109 aa11.4□□□□□ -0.58
SNX13-205ENST00000471744 VSIRQ9H7M9 311 aa11.4□□□□□ -0.58
SNX13-205ENST00000471744 NPVFQ9HCQ7 196 aa11.4□□□□□ -0.58
SNX13-205ENST00000471744 IZUMO1RA6ND01 250 aa11.39□□□□□ -0.59
SNX13-205ENST00000471744 TSPAN4O14817 238 aa11.39□□□□□ -0.59
SNX13-205ENST00000471744 HNRNPCP07910 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
SNX13-205ENST00000471744 SULT1A1P50225 295 aa11.39□□□□□ -0.59
SNX13-205ENST00000471744 GUCA2BQ16661 112 aa11.39□□□□□ -0.59
SNX13-205ENST00000471744 LRRC37A5PQ49AS3 106 aa11.39□□□□□ -0.59
SNX13-205ENST00000471744 ASB13Q8WXK3 278 aa11.39□□□□□ -0.59
SNX13-205ENST00000471744 GRAMD2BQ96HH9 432 aa11.39□□□□□ -0.59
SNX13-205ENST00000471744 SPAG8Q99932 426 aaPredicted RBP11.39□□□□□ -0.59
SNX13-205ENST00000471744 SLC25A31Q9H0C2 315 aa11.39□□□□□ -0.59
SNX13-205ENST00000471744 DNAH3Q8TD57 4116 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 IGKV1OR2-108A0A075B7D4 117 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 FAM24AA6NFZ4 105 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 ZNF785A8K8V0 405 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 CCNKO75909 580 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 S100A7P31151 101 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 S100A11P31949 105 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 P2RY1P47900 373 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 RRAS2P62070 204 aaPredicted RBP11.38□□□□□ -0.59
SNX13-205ENST00000471744 SELENOTP62341 195 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 ZNF90Q03938 601 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 SLC38A11Q08AI6 406 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 DEFB121Q5J5C9 76 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 TMEM252Q8N6L7 170 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 BPIFCQ8NFQ6 507 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 RNF125Q96EQ8 232 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 WDR89Q96FK6 387 aaPredicted RBP11.38□□□□□ -0.59
SNX13-205ENST00000471744 RABAC1Q9UI14 185 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 LSM4Q9Y4Z0 139 aaKnown RBP11.38□□□□□ -0.59
SNX13-205ENST00000471744 SMAD5-AS1Q9Y6J3 95 aa11.38□□□□□ -0.59
SNX13-205ENST00000471744 CST7O76096 145 aa11.37□□□□□ -0.59
SNX13-205ENST00000471744 MPC2O95563 127 aa11.37□□□□□ -0.59
SNX13-205ENST00000471744 EIF2B2P49770 351 aaKnown RBP11.37□□□□□ -0.59
SNX13-205ENST00000471744 ATP6V1FQ16864 119 aa11.37□□□□□ -0.59
SNX13-205ENST00000471744 TEPPQ6URK8 271 aa11.37□□□□□ -0.59
SNX13-205ENST00000471744 LILRB2Q8N423 598 aa11.37□□□□□ -0.59
SNX13-205ENST00000471744 ST8SIA2Q92186 375 aa11.37□□□□□ -0.59
SNX13-205ENST00000471744 RNF2Q99496 336 aa11.37□□□□□ -0.59
SNX13-205ENST00000471744 IGHV3-49A0A0A0MS15 119 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 IGSF23A1L1A6 192 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 OR4C46A6NHA9 309 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 LYZP61626 148 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 PAFAH1B2P68402 229 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 BAXQ07812 192 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 ARL16Q0P5N6 197 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 FCN2Q15485 313 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 USF2Q15853 346 aaPredicted RBP11.36□□□□□ -0.59
SNX13-205ENST00000471744 TMEM217Q8N7C4 229 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 PBDC1Q9BVG4 233 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 TMEM147Q9BVK8 224 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 UQCC1Q9NVA1 299 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 SLC45A2Q9UMX9 530 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 U3KQE9 123 aa11.36□□□□□ -0.59
SNX13-205ENST00000471744 IGHV3OR16-13A0A075B7E8 117 aa11.35□□□□□ -0.59
SNX13-205ENST00000471744 IGHV3-74A0A0B4J1X5 117 aa11.35□□□□□ -0.59
SNX13-205ENST00000471744 CXCL3P19876 107 aa11.35□□□□□ -0.59
SNX13-205ENST00000471744 CD81P60033 236 aa11.35□□□□□ -0.59
SNX13-205ENST00000471744 OR2F1Q13607 317 aa11.35□□□□□ -0.59
SNX13-205ENST00000471744 RAB31Q13636 194 aa11.35□□□□□ -0.59
SNX13-205ENST00000471744 FAM90A2PQ658T7 463 aa11.35□□□□□ -0.59
SNX13-205ENST00000471744 CYP2G1PQ6ZSU1 146 aa11.35□□□□□ -0.59
SNX13-205ENST00000471744 TCF24Q7RTU0 167 aa11.35□□□□□ -0.59
SNX13-205ENST00000471744 S100A7AQ86SG5 101 aa11.35□□□□□ -0.59
SNX13-205ENST00000471744 OR11H7Q8NGC8 314 aa11.35□□□□□ -0.59
SNX13-205ENST00000471744 NEURL2Q9BR09 285 aa11.35□□□□□ -0.59
SNX13-205ENST00000471744 OR5AC2Q9NZP5 309 aa11.35□□□□□ -0.59
SNX13-205ENST00000471744 TRAV2A0A0B4J234 112 aa11.34□□□□□ -0.59
SNX13-205ENST00000471744 HELTA6NFD8 242 aa11.34□□□□□ -0.59
SNX13-205ENST00000471744 H0YIZ8 118 aa11.34□□□□□ -0.59
SNX13-205ENST00000471744 APOHP02749 345 aaPredicted RBP11.34□□□□□ -0.59
SNX13-205ENST00000471744 GIPP09681 153 aaPredicted RBP11.34□□□□□ -0.59
SNX13-205ENST00000471744 AP2S1P53680 142 aaPredicted RBP11.34□□□□□ -0.59
SNX13-205ENST00000471744 CMC4P56277 68 aaPredicted RBP11.34□□□□□ -0.59
SNX13-205ENST00000471744 FGL1Q08830 312 aa11.34□□□□□ -0.59
SNX13-205ENST00000471744 VWC2Q2TAL6 325 aa11.34□□□□□ -0.59
SNX13-205ENST00000471744 ZNF546Q86UE3 836 aa11.34□□□□□ -0.59
SNX13-205ENST00000471744 Q8N1Y9 231 aa11.34□□□□□ -0.59
SNX13-205ENST00000471744 THAP6Q8TBB0 222 aa11.34□□□□□ -0.59
SNX13-205ENST00000471744 RNF126Q9BV68 326 aa11.34□□□□□ -0.59
SNX13-205ENST00000471744 A8MZ25 164 aa11.33□□□□□ -0.6
SNX13-205ENST00000471744 BUB3O43684 328 aa11.33□□□□□ -0.6
SNX13-205ENST00000471744 DFFBO76075 338 aa11.33□□□□□ -0.6
SNX13-205ENST00000471744 RAP2BP61225 183 aa11.33□□□□□ -0.6
SNX13-205ENST00000471744 EWSR1Q01844 656 aaKnown RBP eCLIP11.33□□□□□ -0.6
SNX13-205ENST00000471744 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
SNX13-205ENST00000471744 PXDC1Q5TGL8 231 aa11.33□□□□□ -0.6
SNX13-205ENST00000471744 C16orf54Q6UWD8 224 aa11.33□□□□□ -0.6
SNX13-205ENST00000471744 PPP1R14BQ96C90 147 aa11.33□□□□□ -0.6
SNX13-205ENST00000471744 FAM110AQ9BQ89 295 aa11.33□□□□□ -0.6
SNX13-205ENST00000471744 MBD2Q9UBB5 411 aa11.33□□□□□ -0.6
SNX13-205ENST00000471744 FBXL17Q9UF56 701 aa11.33□□□□□ -0.6
SNX13-205ENST00000471744 SELENOKQ9Y6D0 94 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms