RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 ZNF90Q03938 601 aa13.76□□□□□ -0.21
COMMD1-207ENST00000471704 GGNBP1Q5YKI7 109 aa13.76□□□□□ -0.21
COMMD1-207ENST00000471704 OR51G1Q8NGK1 321 aa13.76□□□□□ -0.21
COMMD1-207ENST00000471704 GATAD1Q8WUU5 269 aa13.76□□□□□ -0.21
COMMD1-207ENST00000471704 GRAMD2BQ96HH9 432 aa13.76□□□□□ -0.21
COMMD1-207ENST00000471704 MAGT1Q9H0U3 335 aa13.76□□□□□ -0.21
COMMD1-207ENST00000471704 PIGBOS1A0A0B4J2F0 54 aa13.75□□□□□ -0.21
COMMD1-207ENST00000471704 C9orf170A2RU37 121 aa13.75□□□□□ -0.21
COMMD1-207ENST00000471704 BUB3O43684 328 aa13.75□□□□□ -0.21
COMMD1-207ENST00000471704 ADAP1O75689 374 aa13.75□□□□□ -0.21
COMMD1-207ENST00000471704 LY6G6CO95867 125 aa13.75□□□□□ -0.21
COMMD1-207ENST00000471704 GIG44P09565 113 aaPredicted RBP13.75□□□□□ -0.21
COMMD1-207ENST00000471704 GPX4P36969 197 aaPredicted RBP13.75□□□□□ -0.21
COMMD1-207ENST00000471704 ATP5IP56385 69 aaPredicted RBP13.75□□□□□ -0.21
COMMD1-207ENST00000471704 TRIQKQ629K1 86 aa13.75□□□□□ -0.21
COMMD1-207ENST00000471704 TRPT1Q86TN4 253 aaKnown RBP13.75□□□□□ -0.21
COMMD1-207ENST00000471704 NARS2Q96I59 477 aaKnown RBP13.75□□□□□ -0.21
COMMD1-207ENST00000471704 FRAS1Q86XX4 4008 aa13.74□□□□□ -0.21
COMMD1-207ENST00000471704 IGKV1OR2-108A0A075B7D4 117 aa13.74□□□□□ -0.21
COMMD1-207ENST00000471704 LINC00854A0A1B0GVQ3 168 aa13.74□□□□□ -0.21
COMMD1-207ENST00000471704 NAP1L6A6NFF2 107 aa13.74□□□□□ -0.21
COMMD1-207ENST00000471704 CA1P00915 261 aaPredicted RBP13.74□□□□□ -0.21
COMMD1-207ENST00000471704 UBE2MP61081 183 aaKnown RBP13.74□□□□□ -0.21
COMMD1-207ENST00000471704 RNF125Q96EQ8 232 aa13.74□□□□□ -0.21
COMMD1-207ENST00000471704 KLK5Q9Y337 293 aaPredicted RBP13.74□□□□□ -0.21
COMMD1-207ENST00000471704 KNCNA6PVL3 124 aa13.73□□□□□ -0.21
COMMD1-207ENST00000471704 SYNGR2O43760 224 aa13.73□□□□□ -0.21
COMMD1-207ENST00000471704 IL7P13232 177 aa13.73□□□□□ -0.21
COMMD1-207ENST00000471704 DHRS2Q13268 280 aa13.73□□□□□ -0.21
COMMD1-207ENST00000471704 SLC35E1Q96K37 410 aa13.73□□□□□ -0.21
COMMD1-207ENST00000471704 RARRES2Q99969 163 aa13.73□□□□□ -0.21
COMMD1-207ENST00000471704 HELTA6NFD8 242 aa13.72□□□□□ -0.21
COMMD1-207ENST00000471704 ZFP92A6NM28 416 aa13.72□□□□□ -0.21
COMMD1-207ENST00000471704 WRBO00258 174 aa13.72□□□□□ -0.21
COMMD1-207ENST00000471704 OR4E1P0C645 316 aa13.72□□□□□ -0.21
COMMD1-207ENST00000471704 C4BPBP20851 252 aa13.72□□□□□ -0.21
COMMD1-207ENST00000471704 INPP1P49441 399 aa13.72□□□□□ -0.21
COMMD1-207ENST00000471704 STHQ8IWL8 128 aa13.72□□□□□ -0.21
COMMD1-207ENST00000471704 PHLDA1Q8WV24 401 aaPredicted RBP13.72□□□□□ -0.21
COMMD1-207ENST00000471704 VPS13DQ5THJ4 4388 aa13.71□□□□□ -0.21
COMMD1-207ENST00000471704 MED6O75586 246 aa13.71□□□□□ -0.21
COMMD1-207ENST00000471704 ANXA7P20073 488 aaKnown RBP13.71□□□□□ -0.21
COMMD1-207ENST00000471704 EIF2B2P49770 351 aaKnown RBP13.71□□□□□ -0.21
COMMD1-207ENST00000471704 RAB11AP62491 216 aa13.71□□□□□ -0.21
COMMD1-207ENST00000471704 SIGLEC15Q6ZMC9 328 aa13.71□□□□□ -0.21
COMMD1-207ENST00000471704 THAP8Q8NA92 274 aa13.71□□□□□ -0.21
COMMD1-207ENST00000471704 OR11H2Q8NH07 326 aa13.71□□□□□ -0.21
COMMD1-207ENST00000471704 PBDC1Q9BVG4 233 aa13.71□□□□□ -0.21
COMMD1-207ENST00000471704 C11orf68Q9H3H3 251 aaKnown RBP13.71□□□□□ -0.21
COMMD1-207ENST00000471704 H3BP45 60 aa13.7□□□□□ -0.22
COMMD1-207ENST00000471704 PLA2G10O15496 165 aa13.7□□□□□ -0.22
COMMD1-207ENST00000471704 AP2S1P53680 142 aaPredicted RBP13.7□□□□□ -0.22
COMMD1-207ENST00000471704 ID3Q02535 119 aa13.7□□□□□ -0.22
COMMD1-207ENST00000471704 PSMG4Q5JS54 123 aa13.7□□□□□ -0.22
COMMD1-207ENST00000471704 GSG1LQ6UXU4 331 aa13.7□□□□□ -0.22
COMMD1-207ENST00000471704 OR4D5Q8NGN0 318 aa13.7□□□□□ -0.22
COMMD1-207ENST00000471704 CIB3Q96Q77 187 aaPredicted RBP13.7□□□□□ -0.22
COMMD1-207ENST00000471704 TRGV9Q99603 122 aa13.7□□□□□ -0.22
COMMD1-207ENST00000471704 NRN1Q9NPD7 142 aa13.7□□□□□ -0.22
COMMD1-207ENST00000471704 PAIP2BQ9ULR5 123 aaKnown RBP13.7□□□□□ -0.22
COMMD1-207ENST00000471704 LYZP61626 148 aa13.69□□□□□ -0.22
COMMD1-207ENST00000471704 POLR2GP62487 172 aaKnown RBP eCLIP13.69□□□□□ -0.22
COMMD1-207ENST00000471704 OR2F1Q13607 317 aa13.69□□□□□ -0.22
COMMD1-207ENST00000471704 ACTL10Q5JWF8 245 aa13.69□□□□□ -0.22
COMMD1-207ENST00000471704 OR8G2PQ6IF36 304 aa13.69□□□□□ -0.22
COMMD1-207ENST00000471704 RAB40CQ96S21 281 aa13.69□□□□□ -0.22
COMMD1-207ENST00000471704 C7orf50Q9BRJ6 194 aaKnown RBP13.69□□□□□ -0.22
COMMD1-207ENST00000471704 SPANXN5Q5MJ07 72 aa13.68□□□□□ -0.22
COMMD1-207ENST00000471704 TMEM182Q6ZP80 229 aaPredicted RBP13.68□□□□□ -0.22
COMMD1-207ENST00000471704 DNAH10Q8IVF4 4471 aa13.67□□□□□ -0.22
COMMD1-207ENST00000471704 PMS2P5A8MQ11 134 aa13.67□□□□□ -0.22
COMMD1-207ENST00000471704 DEFB4AO15263 64 aa13.67□□□□□ -0.22
COMMD1-207ENST00000471704 PAX9P55771 341 aa13.67□□□□□ -0.22
COMMD1-207ENST00000471704 NANOS2P60321 138 aaKnown RBP13.67□□□□□ -0.22
COMMD1-207ENST00000471704 LGALS9CQ6DKI2 356 aa13.67□□□□□ -0.22
COMMD1-207ENST00000471704 Q8NAQ8 132 aa13.67□□□□□ -0.22
COMMD1-207ENST00000471704 CSNK1G2-AS1Q8NCQ2 148 aa13.67□□□□□ -0.22
COMMD1-207ENST00000471704 COQ8AQ8NI60 647 aa13.67□□□□□ -0.22
COMMD1-207ENST00000471704 C11orf45Q8TAV5 145 aa13.67□□□□□ -0.22
COMMD1-207ENST00000471704 WDR12Q9GZL7 423 aaKnown RBP13.67□□□□□ -0.22
COMMD1-207ENST00000471704 NDUFA13Q9P0J0 144 aa13.67□□□□□ -0.22
COMMD1-207ENST00000471704 CENPXA8MT69 81 aa13.66□□□□□ -0.22
COMMD1-207ENST00000471704 SOCS3O14543 225 aa13.66□□□□□ -0.22
COMMD1-207ENST00000471704 CCNKO75909 580 aa13.66□□□□□ -0.22
COMMD1-207ENST00000471704 SPP1P10451 314 aa13.66□□□□□ -0.22
COMMD1-207ENST00000471704 GATA2P23769 480 aaPredicted RBP13.66□□□□□ -0.22
COMMD1-207ENST00000471704 DEFB1P60022 68 aa13.66□□□□□ -0.22
COMMD1-207ENST00000471704 C4orf46Q504U0 113 aa13.66□□□□□ -0.22
COMMD1-207ENST00000471704 MORN3Q6PF18 240 aaPredicted RBP13.66□□□□□ -0.22
COMMD1-207ENST00000471704 ACOT7LQ6ZUV0 252 aa13.66□□□□□ -0.22
COMMD1-207ENST00000471704 MFFQ9GZY8 342 aa13.66□□□□□ -0.22
COMMD1-207ENST00000471704 SEPSECSQ9HD40 501 aaKnown RBP13.66□□□□□ -0.22
COMMD1-207ENST00000471704 SNRPGP15A8MWD9 76 aa13.65□□□□□ -0.22
COMMD1-207ENST00000471704 NKX2-1P43699 371 aaPredicted RBP13.65□□□□□ -0.22
COMMD1-207ENST00000471704 RPP30P78346 268 aaKnown RBP13.65□□□□□ -0.22
COMMD1-207ENST00000471704 GDF5OSQ5U4N7 250 aa13.65□□□□□ -0.22
COMMD1-207ENST00000471704 RPP25LQ8N5L8 163 aaKnown RBP13.65□□□□□ -0.22
COMMD1-207ENST00000471704 C17orf77Q96MU5 243 aa13.65□□□□□ -0.22
COMMD1-207ENST00000471704 C20orf85Q9H1P6 137 aa13.65□□□□□ -0.22
COMMD1-207ENST00000471704 CLEC5AQ9NY25 188 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms