RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 NAA20P61599 178 aa-0.69□□□□□ -2.52
COMMD3-209ENST00000471350 RHOBP62745 196 aa-0.69□□□□□ -2.52
COMMD3-209ENST00000471350 SPINK13Q1W4C9 94 aa-0.69□□□□□ -2.52
COMMD3-209ENST00000471350 FUNDC1Q8IVP5 155 aa-0.69□□□□□ -2.52
COMMD3-209ENST00000471350 TET1Q8NFU7 2136 aa-0.69□□□□□ -2.52
COMMD3-209ENST00000471350 OR5D14Q8NGL3 314 aa-0.69□□□□□ -2.52
COMMD3-209ENST00000471350 KLK6Q92876 244 aa-0.69□□□□□ -2.52
COMMD3-209ENST00000471350 LPAR5Q9H1C0 372 aa-0.69□□□□□ -2.52
COMMD3-209ENST00000471350 TMEM56-RWDD3S4R434 201 aa-0.69□□□□□ -2.52
COMMD3-209ENST00000471350 FAM208BQ5VWN6 2430 aa-0.69□□□□□ -2.52
COMMD3-209ENST00000471350 FLNAP21333 2647 aaKnown RBP-0.69□□□□□ -2.52
COMMD3-209ENST00000471350 ABCC11Q96J66 1382 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 TAF1LQ8IZX4 1826 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 TPM1P09493 284 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 CXCL8P10145 99 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 PMAIP1Q13794 54 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 C20orf196Q8IYI0 205 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 SLC30A7Q8NEW0 376 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 OR10AG1Q8NH19 301 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 DNAJB3Q8WWF6 145 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 UPF3BQ9BZI7 483 aaKnown RBP-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 PBOV1Q9GZY1 135 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 UBAP1Q9NZ09 502 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 OPTCQ9UBM4 332 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 BOKQ9UMX3 212 aaPredicted RBP-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 CYSLTR1Q9Y271 337 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 LOC285556D6RIA3 1793 aa-0.7□□□□□ -2.52
COMMD3-209ENST00000471350 LOC107984156A0A0G2JMH3 177 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 TRPC5OSA6NMA1 111 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 EVPLLA8MZ36 301 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 PSMD12O00232 456 aaPredicted RBP-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 YKT6O15498 198 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 TIMM17BO60830 172 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 C8orf88P0DMB2 117 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 DSCR4P56555 118 aaPredicted RBP-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 RAB5BP61020 215 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 AADACL4Q5VUY2 407 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 SPOPLQ6IQ16 392 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 LRRN1Q6UXK5 716 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 ARL17AQ8IVW1 177 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 PIGXQ8TBF5 258 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 SLAMF6Q96DU3 332 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 C19orf60Q96EN9 201 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 TREM1Q9NP99 234 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 OR52A1Q9UKL2 312 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 LSM5Q9Y4Y9 91 aaKnown RBP-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 LY96Q9Y6Y9 160 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 RAD50Q92878 1312 aa-0.71□□□□□ -2.52
COMMD3-209ENST00000471350 EEF1E1-BLOC1S5C9J1V9 151 aa-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 E7EUB6 86 aa-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 OR2J2O76002 312 aa-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 CRYZL1O95825 349 aa-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 OR5G3P0C626 314 aa-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 SNRPD2P62316 118 aaKnown RBP-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 DYNLT1P63172 113 aa-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 OGFRL1Q5TC84 451 aaPredicted RBP-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 Q8IYB0 196 aa-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 KRT222Q8N1A0 295 aa-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 ANKRD29Q8N6D5 301 aa-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 OR52R1Q8NGF1 315 aa-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 RMND5BQ96G75 393 aaPredicted RBP-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 CHMP4BQ9H444 224 aaKnown RBP-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 PLEKHJ1Q9NW61 149 aa-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 MED1Q15648 1581 aaPredicted RBP-0.72□□□□□ -2.52
COMMD3-209ENST00000471350 SBF1O95248 1867 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 UNC13CQ8NB66 2214 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 PRORSD1PA6NEY8 169 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 A8MWV9 139 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 GOLGA8KD6RF30 607 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 J3QRK9 145 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 FXYD1O00168 92 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 PIRO00625 290 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 ISG15P05161 165 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 IFITM1P13164 125 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 PSME3P61289 254 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 OCIAD2Q56VL3 154 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 HIST2H3PS2Q5TEC6 136 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 VMO1Q7Z5L0 202 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 OR5AS1Q8N127 324 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 OR51D1Q8NGF3 324 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 OR52E6Q96RD3 313 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 C7orf50Q9BRJ6 194 aaKnown RBP-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 PRADC1Q9BSG0 188 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 KIFC1Q9BW19 673 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 C20orf27Q9GZN8 174 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 CCDC90BQ9GZT6 254 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 FGFR1OP2Q9NVK5 253 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 CMTM6Q9NX76 183 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 MYO18AQ92614 2054 aaKnown RBP-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 PTPN13Q12923 2485 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 NUP155O75694 1391 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 KIF13BQ9NQT8 1826 aa-0.73□□□□□ -2.53
COMMD3-209ENST00000471350 SRRM2Q9UQ35 2752 aaKnown RBP-0.74□□□□□ -2.53
COMMD3-209ENST00000471350 C1orf196B1AJZ1 125 aa-0.74□□□□□ -2.53
COMMD3-209ENST00000471350 CXCR6O00574 342 aa-0.74□□□□□ -2.53
COMMD3-209ENST00000471350 LY6G6CO95867 125 aa-0.74□□□□□ -2.53
COMMD3-209ENST00000471350 RBP1P09455 135 aa-0.74□□□□□ -2.53
COMMD3-209ENST00000471350 SMIM10L2AP0DMW4 78 aa-0.74□□□□□ -2.53
COMMD3-209ENST00000471350 SMIM10L2BP0DMW5 78 aa-0.74□□□□□ -2.53
COMMD3-209ENST00000471350 BLVRAP53004 296 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms