RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 BUB3O43684 328 aa12.16□□□□□ -0.46
C4A-250ENST00000469975 MIFP14174 115 aa12.16□□□□□ -0.46
C4A-250ENST00000469975 TNFSF8P32971 234 aa12.16□□□□□ -0.46
C4A-250ENST00000469975 EIF2B2P49770 351 aaKnown RBP12.16□□□□□ -0.46
C4A-250ENST00000469975 CCR6P51684 374 aa12.16□□□□□ -0.46
C4A-250ENST00000469975 TMBIM6P55061 237 aa12.16□□□□□ -0.46
C4A-250ENST00000469975 SIGLEC15Q6ZMC9 328 aa12.16□□□□□ -0.46
C4A-250ENST00000469975 SOSTQ9BQB4 213 aa12.16□□□□□ -0.46
C4A-250ENST00000469975 PBDC1Q9BVG4 233 aa12.16□□□□□ -0.46
C4A-250ENST00000469975 NRN1Q9NPD7 142 aa12.16□□□□□ -0.46
C4A-250ENST00000469975 RSL24D1Q9UHA3 163 aaKnown RBP12.16□□□□□ -0.46
C4A-250ENST00000469975 TBC1D24Q9ULP9 559 aa12.16□□□□□ -0.46
C4A-250ENST00000469975 IGKV1D-37A0A075B6S9 117 aa12.15□□□□□ -0.46
C4A-250ENST00000469975 A0A0B4J2A0 478 aa12.15□□□□□ -0.46
C4A-250ENST00000469975 H3BMQ9 156 aa12.15□□□□□ -0.46
C4A-250ENST00000469975 ZNF90Q03938 601 aa12.15□□□□□ -0.46
C4A-250ENST00000469975 TMEM41BQ5BJD5 291 aa12.15□□□□□ -0.46
C4A-250ENST00000469975 OR1S1Q8NH92 325 aa12.15□□□□□ -0.46
C4A-250ENST00000469975 RNF125Q96EQ8 232 aa12.15□□□□□ -0.46
C4A-250ENST00000469975 XCL2Q9UBD3 114 aa12.15□□□□□ -0.46
C4A-250ENST00000469975 SHPKQ9UHJ6 478 aa12.15□□□□□ -0.46
C4A-250ENST00000469975 FABP12A6NFH5 140 aa12.14□□□□□ -0.47
C4A-250ENST00000469975 H3BMM0 161 aa12.14□□□□□ -0.47
C4A-250ENST00000469975 AP2S1P53680 142 aaPredicted RBP12.14□□□□□ -0.47
C4A-250ENST00000469975 KLF9Q13886 244 aaPredicted RBP12.14□□□□□ -0.47
C4A-250ENST00000469975 GAMTQ14353 236 aa12.14□□□□□ -0.47
C4A-250ENST00000469975 GDF5OSQ5U4N7 250 aa12.14□□□□□ -0.47
C4A-250ENST00000469975 TMED4Q7Z7H5 227 aa12.14□□□□□ -0.47
C4A-250ENST00000469975 NOXA1Q86UR1 476 aa12.14□□□□□ -0.47
C4A-250ENST00000469975 HRH4Q9H3N8 390 aa12.14□□□□□ -0.47
C4A-250ENST00000469975 RABL2AQ9UBK7 228 aaPredicted RBP12.14□□□□□ -0.47
C4A-250ENST00000469975 RABL2BQ9UNT1 228 aa12.14□□□□□ -0.47
C4A-250ENST00000469975 U3KQ87 197 aa12.14□□□□□ -0.47
C4A-250ENST00000469975 IGKV3-20P01619 116 aa12.13□□□□□ -0.47
C4A-250ENST00000469975 IAPPP10997 89 aa12.13□□□□□ -0.47
C4A-250ENST00000469975 FXYD7P58549 80 aa12.13□□□□□ -0.47
C4A-250ENST00000469975 SNRPD3P62318 126 aaKnown RBP12.13□□□□□ -0.47
C4A-250ENST00000469975 OR2F1Q13607 317 aa12.13□□□□□ -0.47
C4A-250ENST00000469975 MCFD2Q8NI22 146 aa12.13□□□□□ -0.47
C4A-250ENST00000469975 SCGB3A2Q96PL1 93 aa12.13□□□□□ -0.47
C4A-250ENST00000469975 SCRT1Q9BWW7 348 aa12.13□□□□□ -0.47
C4A-250ENST00000469975 WDR12Q9GZL7 423 aaKnown RBP12.13□□□□□ -0.47
C4A-250ENST00000469975 HERC2O95714 4834 aa12.13□□□□□ -0.47
C4A-250ENST00000469975 ZFP92A6NM28 416 aa12.12□□□□□ -0.47
C4A-250ENST00000469975 C11orf94C9JXX5 98 aa12.12□□□□□ -0.47
C4A-250ENST00000469975 C12orf74Q32Q52 190 aa12.12□□□□□ -0.47
C4A-250ENST00000469975 LINC00052Q96N35 136 aa12.12□□□□□ -0.47
C4A-250ENST00000469975 BCL7BQ9BQE9 202 aa12.12□□□□□ -0.47
C4A-250ENST00000469975 HECTD4Q9Y4D8 3996 aa12.11□□□□□ -0.47
C4A-250ENST00000469975 IGHV4-4A0A075B6R2 117 aa12.11□□□□□ -0.47
C4A-250ENST00000469975 TRAV10A0A0B4J240 114 aa12.11□□□□□ -0.47
C4A-250ENST00000469975 ANXA3P12429 323 aa12.11□□□□□ -0.47
C4A-250ENST00000469975 HLA-DRB4P13762 266 aa12.11□□□□□ -0.47
C4A-250ENST00000469975 LYZP61626 148 aa12.11□□□□□ -0.47
C4A-250ENST00000469975 TRIM63Q969Q1 353 aa12.11□□□□□ -0.47
C4A-250ENST00000469975 SLC35E1Q96K37 410 aa12.11□□□□□ -0.47
C4A-250ENST00000469975 CACFD1Q9UGQ2 172 aa12.11□□□□□ -0.47
C4A-250ENST00000469975 PAIP2BQ9ULR5 123 aaKnown RBP12.11□□□□□ -0.47
C4A-250ENST00000469975 HLA-DRB4X5D2U9 266 aa12.11□□□□□ -0.47
C4A-250ENST00000469975 NOL3O60936 208 aaKnown RBP12.1□□□□□ -0.47
C4A-250ENST00000469975 PITX3O75364 302 aa12.1□□□□□ -0.47
C4A-250ENST00000469975 GPX4P36969 197 aaPredicted RBP12.1□□□□□ -0.47
C4A-250ENST00000469975 TCTAP57738 103 aa12.1□□□□□ -0.47
C4A-250ENST00000469975 SRPXP78539 464 aa12.1□□□□□ -0.47
C4A-250ENST00000469975 PYDC2Q56P42 97 aa12.1□□□□□ -0.47
C4A-250ENST00000469975 MAGT1Q9H0U3 335 aa12.1□□□□□ -0.47
C4A-250ENST00000469975 IGKV1OR2-108A0A075B7D4 117 aa12.09□□□□□ -0.47
C4A-250ENST00000469975 VAMP1P23763 118 aa12.09□□□□□ -0.47
C4A-250ENST00000469975 OR8G2PQ6IF36 304 aa12.09□□□□□ -0.47
C4A-250ENST00000469975 SEPSECSQ9HD40 501 aaKnown RBP12.09□□□□□ -0.47
C4A-250ENST00000469975 V9GYH0 126 aa12.09□□□□□ -0.47
C4A-250ENST00000469975 DNAH2Q9P225 4427 aa12.08□□□□□ -0.48
C4A-250ENST00000469975 DNAH17Q9UFH2 4485 aa12.08□□□□□ -0.48
C4A-250ENST00000469975 IGHV3OR16-12A0A075B7B8 117 aa12.08□□□□□ -0.48
C4A-250ENST00000469975 DEFB131BA0A096LNP1 70 aa12.08□□□□□ -0.48
C4A-250ENST00000469975 F6UB75 175 aa12.08□□□□□ -0.48
C4A-250ENST00000469975 SOCS3O14543 225 aa12.08□□□□□ -0.48
C4A-250ENST00000469975 NKX2-1P43699 371 aaPredicted RBP12.08□□□□□ -0.48
C4A-250ENST00000469975 EMP1P54849 157 aa12.08□□□□□ -0.48
C4A-250ENST00000469975 ZNF79Q15937 498 aa12.08□□□□□ -0.48
C4A-250ENST00000469975 TOMM5Q8N4H5 51 aa12.08□□□□□ -0.48
C4A-250ENST00000469975 C1QTNF4Q9BXJ3 329 aa12.08□□□□□ -0.48
C4A-250ENST00000469975 FAUP35544 74 aaKnown RBP12.07□□□□□ -0.48
C4A-250ENST00000469975 NUTF2P61970 127 aaKnown RBP12.07□□□□□ -0.48
C4A-250ENST00000469975 PPP1R1AQ13522 171 aa12.07□□□□□ -0.48
C4A-250ENST00000469975 TMEM128Q5BJH2 165 aa12.07□□□□□ -0.48
C4A-250ENST00000469975 PPP1R14BQ96C90 147 aa12.07□□□□□ -0.48
C4A-250ENST00000469975 SLC35B3Q9H1N7 401 aa12.07□□□□□ -0.48
C4A-250ENST00000469975 SAV1Q9H4B6 383 aaPredicted RBP12.07□□□□□ -0.48
C4A-250ENST00000469975 DUXBA0A1W2PPF3 345 aa12.06□□□□□ -0.48
C4A-250ENST00000469975 HOXB5P09067 269 aa12.06□□□□□ -0.48
C4A-250ENST00000469975 NUP62P37198 522 aaPredicted RBP12.06□□□□□ -0.48
C4A-250ENST00000469975 ZNF705AQ6ZN79 300 aaPredicted RBP12.06□□□□□ -0.48
C4A-250ENST00000469975 TMEM182Q6ZP80 229 aaPredicted RBP12.06□□□□□ -0.48
C4A-250ENST00000469975 CENPSQ8N2Z9 138 aa12.06□□□□□ -0.48
C4A-250ENST00000469975 ZNF709Q8N972 641 aa12.06□□□□□ -0.48
C4A-250ENST00000469975 OR4B1Q8NGF8 309 aa12.06□□□□□ -0.48
C4A-250ENST00000469975 COQ8AQ8NI60 647 aa12.06□□□□□ -0.48
C4A-250ENST00000469975 C20orf173Q96LM9 149 aa12.06□□□□□ -0.48
C4A-250ENST00000469975 TRGV9Q99603 122 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms