RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 WI2-2373I1.2A0A1W2PRP0 233 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 PSG1P11464 419 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 CDX1P47902 265 aaPredicted RBP9.87□□□□□ -0.83
TRAF4-208ENST00000469529 TPPP2P59282 170 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 ZNF616Q08AN1 781 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 FAM74A1Q5RGS3 127 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 ZNF329Q86UD4 541 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 KLHDC1Q8N7A1 406 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 OR10G4Q8NGN3 311 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 OR10G9Q8NGN4 311 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 OR10G7Q8NGN6 311 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 OR1L4Q8NGR5 311 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 OR4F5Q8NH21 305 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 Q8WTZ3 238 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 FAM210AQ96ND0 272 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 PFDN5Q99471 154 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 DNHD1Q96M86 4753 aa9.87□□□□□ -0.83
TRAF4-208ENST00000469529 LINC00862A6NCI5 91 aa9.86□□□□□ -0.83
TRAF4-208ENST00000469529 ZNF705EA8MWA4 302 aaPredicted RBP9.86□□□□□ -0.83
TRAF4-208ENST00000469529 NUDT19A8MXV4 375 aa9.86□□□□□ -0.83
TRAF4-208ENST00000469529 NUPL2O15504 423 aaKnown RBP9.86□□□□□ -0.83
TRAF4-208ENST00000469529 TGOLN2O43493 480 aa9.86□□□□□ -0.83
TRAF4-208ENST00000469529 NDUFA5Q16718 116 aa9.86□□□□□ -0.83
TRAF4-208ENST00000469529 TIGITQ495A1 244 aa9.86□□□□□ -0.83
TRAF4-208ENST00000469529 Q56UQ5 140 aa9.86□□□□□ -0.83
TRAF4-208ENST00000469529 OR51G1Q8NGK1 321 aa9.86□□□□□ -0.83
TRAF4-208ENST00000469529 TMEM37Q8WXS4 190 aa9.86□□□□□ -0.83
TRAF4-208ENST00000469529 ZNF414Q96IQ9 312 aa9.86□□□□□ -0.83
TRAF4-208ENST00000469529 ACTR3CQ9C0K3 210 aaPredicted RBP9.86□□□□□ -0.83
TRAF4-208ENST00000469529 VSIRQ9H7M9 311 aa9.86□□□□□ -0.83
TRAF4-208ENST00000469529 MRPL27Q9P0M9 148 aaKnown RBP9.86□□□□□ -0.83
TRAF4-208ENST00000469529 CTXND1A0A1B0GTU2 59 aa9.85□□□□□ -0.83
TRAF4-208ENST00000469529 CLPSL1A2RUU4 121 aa9.85□□□□□ -0.83
TRAF4-208ENST00000469529 HYPMO75409 117 aa9.85□□□□□ -0.83
TRAF4-208ENST00000469529 H2AFB1P0C5Y9 115 aa9.85□□□□□ -0.83
TRAF4-208ENST00000469529 OR5G3P0C626 314 aa9.85□□□□□ -0.83
TRAF4-208ENST00000469529 RHOBP62745 196 aa9.85□□□□□ -0.83
TRAF4-208ENST00000469529 RELQ04864 619 aaPredicted RBP9.85□□□□□ -0.83
TRAF4-208ENST00000469529 PATE2Q6UY27 113 aa9.85□□□□□ -0.83
TRAF4-208ENST00000469529 ZNF600Q6ZNG1 722 aa9.85□□□□□ -0.83
TRAF4-208ENST00000469529 S100A7AQ86SG5 101 aa9.85□□□□□ -0.83
TRAF4-208ENST00000469529 OR5AU1Q8NGC0 362 aa9.85□□□□□ -0.83
TRAF4-208ENST00000469529 CHRDL1Q9BU40 450 aa9.85□□□□□ -0.83
TRAF4-208ENST00000469529 MRPL32Q9BYC8 188 aaKnown RBP9.85□□□□□ -0.83
TRAF4-208ENST00000469529 OR2T8A6NH00 312 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 TEX46H3BTG2 121 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 HBE1P02100 147 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 GATA2P23769 480 aaPredicted RBP9.84□□□□□ -0.83
TRAF4-208ENST00000469529 S100A7P31151 101 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 FHITP49789 147 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 PROK1P58294 105 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 RAB2AP61019 212 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 ZNF726P1Q15940 193 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 C10orf99Q6UWK7 81 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 CLEC19AQ6UXS0 136 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 OR4X2Q8NGF9 303 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 FAM213BQ8TBF2 198 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 RAB24Q969Q5 203 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 RCC1LQ96I51 464 aaKnown RBP9.84□□□□□ -0.83
TRAF4-208ENST00000469529 PEF1Q9UBV8 284 aaKnown RBP9.84□□□□□ -0.83
TRAF4-208ENST00000469529 RNF24Q9Y225 148 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 FUT9Q9Y231 359 aa9.84□□□□□ -0.83
TRAF4-208ENST00000469529 I3L521 148 aa9.83□□□□□ -0.84
TRAF4-208ENST00000469529 RPLP1P05386 114 aaKnown RBP9.83□□□□□ -0.84
TRAF4-208ENST00000469529 LGALS1P09382 135 aaKnown RBP9.83□□□□□ -0.84
TRAF4-208ENST00000469529 STAG3L2P0CL84 134 aa9.83□□□□□ -0.84
TRAF4-208ENST00000469529 STAG3L3P0CL85 134 aa9.83□□□□□ -0.84
TRAF4-208ENST00000469529 GPR183P32249 361 aa9.83□□□□□ -0.84
TRAF4-208ENST00000469529 GCSAMLQ5JQS6 135 aa9.83□□□□□ -0.84
TRAF4-208ENST00000469529 TCTEX1D4Q5JR98 221 aa9.83□□□□□ -0.84
TRAF4-208ENST00000469529 GPHB5Q86YW7 130 aa9.83□□□□□ -0.84
TRAF4-208ENST00000469529 RNF125Q96EQ8 232 aa9.83□□□□□ -0.84
TRAF4-208ENST00000469529 SEPSECSQ9HD40 501 aaKnown RBP9.83□□□□□ -0.84
TRAF4-208ENST00000469529 S4R3C0 116 aa9.83□□□□□ -0.84
TRAF4-208ENST00000469529 CUBNO60494 3623 aa9.83□□□□□ -0.84
TRAF4-208ENST00000469529 A0A1W2PPV4 95 aa9.82□□□□□ -0.84
TRAF4-208ENST00000469529 NDUFA4O00483 81 aa9.82□□□□□ -0.84
TRAF4-208ENST00000469529 GGCTO75223 188 aaKnown RBP9.82□□□□□ -0.84
TRAF4-208ENST00000469529 IGHV3-23P01764 117 aa9.82□□□□□ -0.84
TRAF4-208ENST00000469529 CDC34P49427 236 aaPredicted RBP9.82□□□□□ -0.84
TRAF4-208ENST00000469529 ELLP55199 621 aaPredicted RBP9.82□□□□□ -0.84
TRAF4-208ENST00000469529 C10orf113Q5VZT2 155 aa9.82□□□□□ -0.84
TRAF4-208ENST00000469529 TOMM20LQ6UXN7 152 aa9.82□□□□□ -0.84
TRAF4-208ENST00000469529 IL34Q6ZMJ4 242 aa9.82□□□□□ -0.84
TRAF4-208ENST00000469529 EIF4E3Q8N5X7 224 aaKnown RBP9.82□□□□□ -0.84
TRAF4-208ENST00000469529 STXBP6Q8NFX7 210 aa9.82□□□□□ -0.84
TRAF4-208ENST00000469529 SUN5Q8TC36 379 aa9.82□□□□□ -0.84
TRAF4-208ENST00000469529 SFT2D1Q8WV19 159 aa9.82□□□□□ -0.84
TRAF4-208ENST00000469529 TECRQ9NZ01 308 aaKnown RBP9.82□□□□□ -0.84
TRAF4-208ENST00000469529 K7EMT4 169 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 COX7A2P2O60397 106 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 NDUFS6O75380 124 aaKnown RBP9.81□□□□□ -0.84
TRAF4-208ENST00000469529 HSPB1P04792 205 aaKnown RBP9.81□□□□□ -0.84
TRAF4-208ENST00000469529 C8orf88P0DMB2 117 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 ARL3P36405 182 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 TAS2R45P59539 299 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 DEFA5Q01523 94 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 FAM78BQ5VT40 261 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 PQLC2Q6ZP29 291 aa9.81□□□□□ -0.84
TRAF4-208ENST00000469529 MARC2Q969Z3 335 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms