RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 TSC22D3Q99576 134 aa3.57□□□□□ -1.84
EXOSC3-204ENST00000465860 PLEKHA3Q9HB20 300 aa3.57□□□□□ -1.84
EXOSC3-204ENST00000465860 FKBP11Q9NYL4 201 aa3.57□□□□□ -1.84
EXOSC3-204ENST00000465860 C21orf62Q9NYP8 219 aa3.57□□□□□ -1.84
EXOSC3-204ENST00000465860 SMAD5-AS1Q9Y6J3 95 aa3.57□□□□□ -1.84
EXOSC3-204ENST00000465860 PIGBOS1A0A0B4J2F0 54 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 RBMY1BA6NDE4 496 aaKnown RBP3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 RBMY1EA6NEQ0 496 aaKnown RBP3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 CENPXA8MT69 81 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 PITX3O75364 302 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 ADAP1O75689 374 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 IFNA17P01571 189 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 IGKV1-17P01599 117 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 IGKV3-20P01619 116 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 RBMY1DP0C7P1 496 aaKnown RBP3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 IL7P13232 177 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 HOXA1P49639 335 aaPredicted RBP3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 FAM3BP58499 235 aaPredicted RBP3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 GUCA2BQ16661 112 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 FAM106AQ4KMX7 169 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 Q56UQ5 140 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 ZNF57Q68EA5 555 aaPredicted RBP3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 GSG1LQ6UXU4 331 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 LINC00322Q6ZN03 302 aaPredicted RBP3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 HSD17B13Q7Z5P4 300 aaPredicted RBP3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 TMED4Q7Z7H5 227 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 SGPP2Q8IWX5 399 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 RRNAD1Q96FB5 475 aaKnown RBP3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 BSCL2Q96G97 398 aaPredicted RBP3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 SCGB3A2Q96PL1 93 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 C7orf50Q9BRJ6 194 aaKnown RBP3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 RBKSQ9H477 322 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 RETNQ9HD89 108 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 PEMTQ9UBM1 199 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 SCP2D1Q9UJQ7 156 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 HYDINQ4G0P3 5121 aa3.56□□□□□ -1.84
EXOSC3-204ENST00000465860 A0A0B4J2A0 478 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 IGHV3-66A0A0C4DH42 116 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 A0A1B0GUV1 79 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 NDUFA4O00483 81 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 B3GALNT1O75752 331 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 NDUFB6O95139 128 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 SFT2D2O95562 160 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 TMEM50AO95807 157 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 HOXB5P09067 269 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 SULT1A3P0DMM9 295 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 SULT1A4P0DMN0 295 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 ANXA7P20073 488 aaKnown RBP3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 FCGR2BP31994 310 aaPredicted RBP3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 MFAP4P55083 255 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 DEFA1P59665 94 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 DEFA3P59666 94 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 CD81P60033 236 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 SPCS3P61009 180 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 UBE2MP61081 183 aaKnown RBP3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 ERHP84090 104 aaKnown RBP3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 IFITM3Q01628 133 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 TNFRSF9Q07011 255 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 HAGHQ16775 308 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 TATDN3Q17R31 274 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 TIGITQ495A1 244 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 C2orf83Q53S99 150 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 TMEM128Q5BJH2 165 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 GFI1BQ5VTD9 330 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 LCN12Q6JVE5 192 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 MZT2BQ6NZ67 158 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 PRSS54Q6PEW0 395 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 SPSB3Q6PJ21 355 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 TOMM20LQ6UXN7 152 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 OR52B4Q8NGK2 314 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 OR52E5Q8NH55 327 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 RNASE11Q8TAA1 199 aaKnown RBP3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 IL22RA2Q969J5 263 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 OR10C1Q96KK4 312 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 RNF2Q99496 336 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 FAM110AQ9BQ89 295 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 NEURL2Q9BR09 285 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 TM2D3Q9BRN9 247 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 C20orf24Q9BUV8 137 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 THYN1Q9P016 225 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 HSPB7Q9UBY9 170 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 UBQLN2Q9UHD9 624 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 SHPKQ9UHJ6 478 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 RYR2Q92736 4967 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 ALMS1Q8TCU4 4167 aa3.55□□□□□ -1.84
EXOSC3-204ENST00000465860 IGKV3-7A0A075B6H7 116 aa3.54□□□□□ -1.84
EXOSC3-204ENST00000465860 IGKV1D-37A0A075B6S9 117 aa3.54□□□□□ -1.84
EXOSC3-204ENST00000465860 IGHV7-4-1A0A0J9YVY3 117 aa3.54□□□□□ -1.84
EXOSC3-204ENST00000465860 C9orf170A2RU37 121 aa3.54□□□□□ -1.84
EXOSC3-204ENST00000465860 NAP1L6A6NFF2 107 aa3.54□□□□□ -1.84
EXOSC3-204ENST00000465860 C15orf62A8K5M9 175 aa3.54□□□□□ -1.84
EXOSC3-204ENST00000465860 CEBPZOSA8MTT3 80 aa3.54□□□□□ -1.84
EXOSC3-204ENST00000465860 A8MZ25 164 aa3.54□□□□□ -1.84
EXOSC3-204ENST00000465860 OR11H12B2RN74 326 aa3.54□□□□□ -1.84
EXOSC3-204ENST00000465860 PRSS46E5RG02 174 aa3.54□□□□□ -1.84
EXOSC3-204ENST00000465860 CHEK1O14757 476 aa3.54□□□□□ -1.84
EXOSC3-204ENST00000465860 NUPL2O15504 423 aaKnown RBP3.54□□□□□ -1.84
EXOSC3-204ENST00000465860 GNG7O60262 68 aa3.54□□□□□ -1.84
EXOSC3-204ENST00000465860 CLN5O75503 358 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms