RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 RBPMS2Q6ZRY4 209 aaKnown RBP10.33□□□□□ -0.76
LIMD1-203ENST00000465039 RHPN1-AS1Q9BWJ2 59 aa10.33□□□□□ -0.76
LIMD1-203ENST00000465039 NPVFQ9HCQ7 196 aa10.33□□□□□ -0.76
LIMD1-203ENST00000465039 SMAD5-AS1Q9Y6J3 95 aa10.33□□□□□ -0.76
LIMD1-203ENST00000465039 IGKV1OR2-108A0A075B7D4 117 aa10.32□□□□□ -0.76
LIMD1-203ENST00000465039 OR4C46A6NHA9 309 aa10.32□□□□□ -0.76
LIMD1-203ENST00000465039 IL4P05112 153 aa10.32□□□□□ -0.76
LIMD1-203ENST00000465039 PSG1P11464 419 aa10.32□□□□□ -0.76
LIMD1-203ENST00000465039 S100A11P31949 105 aa10.32□□□□□ -0.76
LIMD1-203ENST00000465039 P2RY1P47900 373 aa10.32□□□□□ -0.76
LIMD1-203ENST00000465039 EIF2B2P49770 351 aaKnown RBP10.32□□□□□ -0.76
LIMD1-203ENST00000465039 BAXQ07812 192 aa10.32□□□□□ -0.76
LIMD1-203ENST00000465039 VWC2Q2TAL6 325 aa10.32□□□□□ -0.76
LIMD1-203ENST00000465039 PPP1R1CQ8WVI7 109 aa10.32□□□□□ -0.76
LIMD1-203ENST00000465039 RNF125Q96EQ8 232 aa10.32□□□□□ -0.76
LIMD1-203ENST00000465039 PRR25Q96S07 402 aa10.32□□□□□ -0.76
LIMD1-203ENST00000465039 SLC25A31Q9H0C2 315 aa10.32□□□□□ -0.76
LIMD1-203ENST00000465039 U3KQE9 123 aa10.32□□□□□ -0.76
LIMD1-203ENST00000465039 HELTA6NFD8 242 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 ZNF785A8K8V0 405 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 PRB2P02812 416 aaPredicted RBP10.31□□□□□ -0.76
LIMD1-203ENST00000465039 HNRNPCP07910 306 aaKnown RBP eCLIP10.31□□□□□ -0.76
LIMD1-203ENST00000465039 BCAP31P51572 246 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 ATP6V1FQ16864 119 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 C1orf194Q5T5A4 169 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 PXDC1Q5TGL8 231 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 FAM90A2PQ658T7 463 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 TEPPQ6URK8 271 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 S100A7AQ86SG5 101 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 HAPLN4Q86UW8 402 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 TMEM252Q8N6L7 170 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 BPIFCQ8NFQ6 507 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 MED28Q9H204 178 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 RABAC1Q9UI14 185 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 RNF24Q9Y225 148 aa10.31□□□□□ -0.76
LIMD1-203ENST00000465039 IZUMO1RA6ND01 250 aa10.3□□□□□ -0.76
LIMD1-203ENST00000465039 SIX6O95475 246 aa10.3□□□□□ -0.76
LIMD1-203ENST00000465039 MPC2O95563 127 aa10.3□□□□□ -0.76
LIMD1-203ENST00000465039 EDN2P20800 178 aa10.3□□□□□ -0.76
LIMD1-203ENST00000465039 AP2S1P53680 142 aaPredicted RBP10.3□□□□□ -0.76
LIMD1-203ENST00000465039 CMC4P56277 68 aaPredicted RBP10.3□□□□□ -0.76
LIMD1-203ENST00000465039 SLC38A11Q08AI6 406 aa10.3□□□□□ -0.76
LIMD1-203ENST00000465039 USF2Q15853 346 aaPredicted RBP10.3□□□□□ -0.76
LIMD1-203ENST00000465039 ZNF546Q86UE3 836 aa10.3□□□□□ -0.76
LIMD1-203ENST00000465039 Q8N1Y9 231 aa10.3□□□□□ -0.76
LIMD1-203ENST00000465039 CHAC2Q8WUX2 184 aa10.3□□□□□ -0.76
LIMD1-203ENST00000465039 WDR89Q96FK6 387 aaPredicted RBP10.3□□□□□ -0.76
LIMD1-203ENST00000465039 RNF2Q99496 336 aa10.3□□□□□ -0.76
LIMD1-203ENST00000465039 IGHV3OR16-8A0A075B7F1 116 aa10.29□□□□□ -0.76
LIMD1-203ENST00000465039 ZNF207O43670 478 aaKnown RBP10.29□□□□□ -0.76
LIMD1-203ENST00000465039 MPDU1O75352 247 aa10.29□□□□□ -0.76
LIMD1-203ENST00000465039 PLP1P60201 277 aa10.29□□□□□ -0.76
LIMD1-203ENST00000465039 RRAS2P62070 204 aaPredicted RBP10.29□□□□□ -0.76
LIMD1-203ENST00000465039 PAFAH1B2P68402 229 aa10.29□□□□□ -0.76
LIMD1-203ENST00000465039 ZNF90Q03938 601 aa10.29□□□□□ -0.76
LIMD1-203ENST00000465039 FGL1Q08830 312 aa10.29□□□□□ -0.76
LIMD1-203ENST00000465039 RAB31Q13636 194 aa10.29□□□□□ -0.76
LIMD1-203ENST00000465039 GUCA2BQ16661 112 aa10.29□□□□□ -0.76
LIMD1-203ENST00000465039 SAMD13Q5VXD3 122 aa10.29□□□□□ -0.76
LIMD1-203ENST00000465039 B9D2Q9BPU9 175 aa10.29□□□□□ -0.76
LIMD1-203ENST00000465039 TMEM147Q9BVK8 224 aa10.29□□□□□ -0.76
LIMD1-203ENST00000465039 UQCC1Q9NVA1 299 aa10.29□□□□□ -0.76
LIMD1-203ENST00000465039 FBXL17Q9UF56 701 aa10.29□□□□□ -0.76
LIMD1-203ENST00000465039 IGSF23A1L1A6 192 aa10.28□□□□□ -0.76
LIMD1-203ENST00000465039 SMCO3A2RU48 225 aa10.28□□□□□ -0.76
LIMD1-203ENST00000465039 BUB3O43684 328 aa10.28□□□□□ -0.76
LIMD1-203ENST00000465039 GIPP09681 153 aaPredicted RBP10.28□□□□□ -0.76
LIMD1-203ENST00000465039 LYL1P12980 280 aa10.28□□□□□ -0.76
LIMD1-203ENST00000465039 CD81P60033 236 aa10.28□□□□□ -0.76
LIMD1-203ENST00000465039 CYP2G1PQ6ZSU1 146 aa10.28□□□□□ -0.76
LIMD1-203ENST00000465039 LILRB2Q8N423 598 aa10.28□□□□□ -0.76
LIMD1-203ENST00000465039 ST8SIA2Q92186 375 aa10.28□□□□□ -0.76
LIMD1-203ENST00000465039 NEURL2Q9BR09 285 aa10.28□□□□□ -0.76
LIMD1-203ENST00000465039 SEPSECSQ9HD40 501 aaKnown RBP10.28□□□□□ -0.76
LIMD1-203ENST00000465039 WDR83OSQ9Y284 106 aa10.28□□□□□ -0.76
LIMD1-203ENST00000465039 FAM24AA6NFZ4 105 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 H0YIZ8 118 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 CCNKO75909 580 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 DFFBO76075 338 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 CST7O76096 145 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 CXCL3P19876 107 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 RAP2BP61225 183 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 ARL16Q0P5N6 197 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 LRRC37A5PQ49AS3 106 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 C16orf54Q6UWD8 224 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 TCF24Q7RTU0 167 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 OR11H7Q8NGC8 314 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 GLMPQ8WWB7 406 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 GPR82Q96P67 336 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 KCNIP2Q9NS61 270 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 C19orf73Q9NVV2 129 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 OR5AC2Q9NZP5 309 aa10.27□□□□□ -0.77
LIMD1-203ENST00000465039 TGP01266 2768 aa10.26□□□□□ -0.77
LIMD1-203ENST00000465039 NHLRC4P0CG21 123 aaPredicted RBP10.26□□□□□ -0.77
LIMD1-203ENST00000465039 LYZP61626 148 aa10.26□□□□□ -0.77
LIMD1-203ENST00000465039 EWSR1Q01844 656 aaKnown RBP eCLIP10.26□□□□□ -0.77
LIMD1-203ENST00000465039 FCN2Q15485 313 aa10.26□□□□□ -0.77
LIMD1-203ENST00000465039 DEFB121Q5J5C9 76 aa10.26□□□□□ -0.77
LIMD1-203ENST00000465039 TMEM217Q8N7C4 229 aa10.26□□□□□ -0.77
LIMD1-203ENST00000465039 THAP6Q8TBB0 222 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms