RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 PHLDA1Q8WV24 401 aaPredicted RBP5.33□□□□□ -1.56
PTPRF-210ENST00000463041 GLMPQ8WWB7 406 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 TRIM63Q969Q1 353 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 ACY3Q96HD9 319 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 RAB40CQ96S21 281 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 MFFQ9GZY8 342 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 TMED3Q9Y3Q3 217 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 V9GYH0 126 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 SNRPGP15A8MWD9 76 aa5.32□□□□□ -1.56
PTPRF-210ENST00000463041 SFT2D2O95562 160 aa5.32□□□□□ -1.56
PTPRF-210ENST00000463041 ZNF688P0C7X2 276 aa5.32□□□□□ -1.56
PTPRF-210ENST00000463041 VAMP1P23763 118 aa5.32□□□□□ -1.56
PTPRF-210ENST00000463041 NUP62P37198 522 aaPredicted RBP5.32□□□□□ -1.56
PTPRF-210ENST00000463041 UBE2MP61081 183 aaKnown RBP5.32□□□□□ -1.56
PTPRF-210ENST00000463041 SNRPD3P62318 126 aaKnown RBP5.32□□□□□ -1.56
PTPRF-210ENST00000463041 USF2Q15853 346 aaPredicted RBP5.32□□□□□ -1.56
PTPRF-210ENST00000463041 ZNF79Q15937 498 aa5.32□□□□□ -1.56
PTPRF-210ENST00000463041 SPANXN2Q5MJ10 180 aa5.32□□□□□ -1.56
PTPRF-210ENST00000463041 OR8G2PQ6IF36 304 aa5.32□□□□□ -1.56
PTPRF-210ENST00000463041 TRPT1Q86TN4 253 aaKnown RBP5.32□□□□□ -1.56
PTPRF-210ENST00000463041 CENPSQ8N2Z9 138 aa5.32□□□□□ -1.56
PTPRF-210ENST00000463041 C11orf45Q8TAV5 145 aa5.32□□□□□ -1.56
PTPRF-210ENST00000463041 SLC35E1Q96K37 410 aa5.32□□□□□ -1.56
PTPRF-210ENST00000463041 CIB3Q96Q77 187 aaPredicted RBP5.32□□□□□ -1.56
PTPRF-210ENST00000463041 C11orf68Q9H3H3 251 aaKnown RBP5.32□□□□□ -1.56
PTPRF-210ENST00000463041 VPS13DQ5THJ4 4388 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 BIRC6Q9NR09 4857 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 NAP1L6A6NFF2 107 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 ZFP92A6NM28 416 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 KNCNA6PVL3 124 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 SYNGR2O43760 224 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 LY6G6CO95867 125 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 CFDP00746 253 aaPredicted RBP5.31□□□□□ -1.56
PTPRF-210ENST00000463041 GIG44P09565 113 aaPredicted RBP5.31□□□□□ -1.56
PTPRF-210ENST00000463041 MIFP14174 115 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 NUTF2P61970 127 aaKnown RBP5.31□□□□□ -1.56
PTPRF-210ENST00000463041 PPP1R1AQ13522 171 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 ACTL10Q5JWF8 245 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 C1orf194Q5T5A4 169 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 GGNBP1Q5YKI7 109 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 SIGLEC15Q6ZMC9 328 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 LINC00476Q8WZB0 136 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 RNF125Q96EQ8 232 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 TRGV9Q99603 122 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 RBM38Q9H0Z9 239 aaKnown RBP5.31□□□□□ -1.56
PTPRF-210ENST00000463041 NRN1Q9NPD7 142 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 FBXL17Q9UF56 701 aa5.31□□□□□ -1.56
PTPRF-210ENST00000463041 IGKV1D-37A0A075B6S9 117 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 CENPXA8MT69 81 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 ZNF705EA8MWA4 302 aaPredicted RBP5.3□□□□□ -1.56
PTPRF-210ENST00000463041 H3BMM0 161 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 WRBO00258 174 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 HOXB5P09067 269 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 IAPPP10997 89 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 S100A7P31151 101 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 ID1P41134 155 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 NKX2-1P43699 371 aaPredicted RBP5.3□□□□□ -1.56
PTPRF-210ENST00000463041 INPP1P49441 399 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 TCTAP57738 103 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 ID3Q02535 119 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 ZNF90Q03938 601 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 CNPY1Q3B7I2 92 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 PSMG4Q5JS54 123 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 THAP8Q8NA92 274 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 CSNK1G2-AS1Q8NCQ2 148 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 PBDC1Q9BVG4 233 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 C1QTNF4Q9BXJ3 329 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 SRRQ9GZT4 340 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 HRH4Q9H3N8 390 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 DNAH6Q9C0G6 4158 aa5.3□□□□□ -1.56
PTPRF-210ENST00000463041 C9orf170A2RU37 121 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 C11orf94C9JXX5 98 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 NDUFB6O95139 128 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 IFNA21P01568 189 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 NANOS2P60321 138 aaKnown RBP5.29□□□□□ -1.56
PTPRF-210ENST00000463041 BAK1Q16611 211 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 SAMD13Q5VXD3 122 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 SPATA31B1PQ5VZV4 182 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 TRIQKQ629K1 86 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 LGALS9CQ6DKI2 356 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 OR8I2Q8N0Y5 310 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 Q8NAQ8 132 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 COQ8AQ8NI60 647 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 C2CD4CQ8TF44 421 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 CLUHP3Q96NS8 147 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 C7orf50Q9BRJ6 194 aaKnown RBP5.29□□□□□ -1.56
PTPRF-210ENST00000463041 MAGT1Q9H0U3 335 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 NDUFA13Q9P0J0 144 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 TBC1D24Q9ULP9 559 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 PAIP2BQ9ULR5 123 aaKnown RBP5.29□□□□□ -1.56
PTPRF-210ENST00000463041 SLC45A2Q9UMX9 530 aa5.29□□□□□ -1.56
PTPRF-210ENST00000463041 STRAPQ9Y3F4 350 aaKnown RBP5.29□□□□□ -1.56
PTPRF-210ENST00000463041 DNAH10Q8IVF4 4471 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 IGKV1OR2-108A0A075B7D4 117 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 PRSS46E5RG02 174 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 DEFB4AO15263 64 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 OR4E1P0C645 316 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 RBMY1A1P0DJD3 496 aaKnown RBP5.28□□□□□ -1.56
PTPRF-210ENST00000463041 RBMY1CP0DJD4 496 aa5.28□□□□□ -1.56
PTPRF-210ENST00000463041 HLA-DRB4P13762 266 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms