RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 CXCL1P09341 107 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 IGLL1P15814 213 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 FUT3P21217 361 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 SSTR5P35346 364 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 GPR12P47775 334 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 TPPP2P59282 170 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 KRTAP10-11P60412 298 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 S100A10P60903 97 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 MEF2CQ06413 473 aaPredicted RBP4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 TPTE2P1Q5T6R2 138 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 GPR157Q5UAW9 335 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 LHFPL1Q86WI0 220 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 TPRX1Q8N7U7 411 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 ADAD2Q8NCV1 583 aaKnown RBP4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 OR4X1Q8NH49 305 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 TMEM230Q96A57 120 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 COQ2Q96H96 371 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 C2orf50Q96LR7 162 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 ZNF714Q96N38 554 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 PYGO2Q9BRQ0 406 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 GINS3Q9BRX5 216 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 NICN1Q9BSH3 213 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 TM2D1Q9BX74 207 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 LPAR5Q9H1C0 372 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 OR6C3Q9NZP0 311 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 FUT9Q9Y231 359 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 HERC2O95714 4834 aa4.79□□□□□ -1.64
SMARCC1-204ENST00000462198 TRBV7-9A0A0J9YWB2 115 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 MAP1LC3B2A6NCE7 125 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 M0R1W7 72 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 SOCS1O15524 211 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 PDE6DO43924 150 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 IGHV4-59P01825 116 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 HBE1P02100 147 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 TYMSP04818 313 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 OR8U9P0C7N5 309 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 ZNF728P0DKX0 622 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 CCL3L1P16619 93 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 TFPI2P48307 235 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 SUPT4H1P63272 117 aaKnown RBP4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 SRPXP78539 464 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 NSUN5P1Q3KNT7 163 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 LRRC37A5PQ49AS3 106 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 AADACL3Q5VUY0 350 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 SLC35E4Q6ICL7 350 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 C6orf201Q7Z4U5 140 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 VMO1Q7Z5L0 202 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 STPG4Q8N801 248 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 LY6G5BQ8NDX9 201 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 PLPPR1Q8TBJ4 325 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 ARHGAP5-AS1Q96IT6 56 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 SCGB3A2Q96PL1 93 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 CABLES2Q9BTV7 478 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 C20orf24Q9BUV8 137 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 MAP1LC3BQ9GZQ8 125 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 SIRPDQ9H106 197 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 C5orf66Q9H5L9 145 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 KIAA1456Q9P272 454 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 TRAPPC2LQ9UL33 140 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 LINC00312Q9Y6C7 94 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 DNAH7Q8WXX0 4024 aa4.78□□□□□ -1.64
SMARCC1-204ENST00000462198 A0A0A6YYD4 124 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 A0A1B0GW15 77 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 GAGE12BA1L429 117 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 C17orf98A8MV24 154 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 A8MZ25 164 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 MPPED1O15442 326 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 AKR1C4P17516 323 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 UCP1P25874 307 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 IER3P46695 156 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 HLA-DRB3P79483 266 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 PRB3Q04118 309 aaPredicted RBP4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 RPL7L1Q6DKI1 246 aaKnown RBP4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 MRPL54Q6P161 138 aaKnown RBP4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 DPPA3Q6W0C5 159 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 ZNF497Q6ZNH5 498 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 TCF23Q7RTU1 214 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 ZNF429Q86V71 674 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 WFDC9Q8NEX5 89 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 OR13A1Q8NGR1 328 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 GLMPQ8WWB7 406 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 CACNG8Q8WXS5 425 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 LHX4Q969G2 390 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 OR10C1Q96KK4 312 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 HARBI1Q96MB7 349 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 RTBDNQ9BSG5 229 aaPredicted RBP4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 PECRQ9BY49 303 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 Q9N2K0 584 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 KCNIP1Q9NZI2 227 aa4.77□□□□□ -1.65
SMARCC1-204ENST00000462198 IGHV2-26A0A0B4J1V2 119 aa4.76□□□□□ -1.65
SMARCC1-204ENST00000462198 IGHV1-69DA0A0B4J2H0 117 aa4.76□□□□□ -1.65
SMARCC1-204ENST00000462198 CENPVL3A0A0U1RRI6 287 aa4.76□□□□□ -1.65
SMARCC1-204ENST00000462198 KBTBD11-OT1A0A1B0GTJ5 212 aa4.76□□□□□ -1.65
SMARCC1-204ENST00000462198 A0A1B0GU03 582 aa4.76□□□□□ -1.65
SMARCC1-204ENST00000462198 NPIPB5A8MRT5 1133 aa4.76□□□□□ -1.65
SMARCC1-204ENST00000462198 FOXI3A8MTJ6 420 aaPredicted RBP4.76□□□□□ -1.65
SMARCC1-204ENST00000462198 H7BYZ3 331 aa4.76□□□□□ -1.65
SMARCC1-204ENST00000462198 K7EQM0 130 aa4.76□□□□□ -1.65
SMARCC1-204ENST00000462198 SDCBPO00560 298 aaPredicted RBP4.76□□□□□ -1.65
SMARCC1-204ENST00000462198 AGPAT2O15120 278 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms