RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 PHLDA1Q8WV24 401 aaPredicted RBP13.82□□□□□ -0.2
VARS-220ENST00000461874 AGRNO00468 2067 aa13.81□□□□□ -0.2
VARS-220ENST00000461874 LY6G6CO95867 125 aa13.81□□□□□ -0.2
VARS-220ENST00000461874 SPP1P10451 314 aa13.81□□□□□ -0.2
VARS-220ENST00000461874 TMEM41BQ5BJD5 291 aa13.81□□□□□ -0.2
VARS-220ENST00000461874 ACTL10Q5JWF8 245 aa13.81□□□□□ -0.2
VARS-220ENST00000461874 MORN3Q6PF18 240 aaPredicted RBP13.81□□□□□ -0.2
VARS-220ENST00000461874 OR51G1Q8NGK1 321 aa13.81□□□□□ -0.2
VARS-220ENST00000461874 C11orf45Q8TAV5 145 aa13.81□□□□□ -0.2
VARS-220ENST00000461874 IGKV1D-37A0A075B6S9 117 aa13.8□□□□□ -0.2
VARS-220ENST00000461874 SFT2D2O95562 160 aa13.8□□□□□ -0.2
VARS-220ENST00000461874 NANOS2P60321 138 aaKnown RBP13.8□□□□□ -0.2
VARS-220ENST00000461874 PPP1R1AQ13522 171 aa13.8□□□□□ -0.2
VARS-220ENST00000461874 PSMG4Q5JS54 123 aa13.8□□□□□ -0.2
VARS-220ENST00000461874 SIGLEC15Q6ZMC9 328 aa13.8□□□□□ -0.2
VARS-220ENST00000461874 RNF125Q96EQ8 232 aa13.8□□□□□ -0.2
VARS-220ENST00000461874 SLC35E1Q96K37 410 aa13.8□□□□□ -0.2
VARS-220ENST00000461874 RAB40CQ96S21 281 aa13.8□□□□□ -0.2
VARS-220ENST00000461874 NRN1Q9NPD7 142 aa13.8□□□□□ -0.2
VARS-220ENST00000461874 BIRC6Q9NR09 4857 aa13.8□□□□□ -0.2
VARS-220ENST00000461874 ZFP92A6NM28 416 aa13.79□□□□□ -0.2
VARS-220ENST00000461874 FAM90A26D6RGX4 464 aa13.79□□□□□ -0.2
VARS-220ENST00000461874 ZNF701M0R085 212 aaPredicted RBP13.79□□□□□ -0.2
VARS-220ENST00000461874 DEFB4AO15263 64 aa13.79□□□□□ -0.2
VARS-220ENST00000461874 IAPPP10997 89 aa13.79□□□□□ -0.2
VARS-220ENST00000461874 ZNF90Q03938 601 aa13.79□□□□□ -0.2
VARS-220ENST00000461874 SPANXN2Q5MJ10 180 aa13.79□□□□□ -0.2
VARS-220ENST00000461874 MFFQ9GZY8 342 aa13.79□□□□□ -0.2
VARS-220ENST00000461874 SEPSECSQ9HD40 501 aaKnown RBP13.79□□□□□ -0.2
VARS-220ENST00000461874 TMED3Q9Y3Q3 217 aa13.79□□□□□ -0.2
VARS-220ENST00000461874 MED6O75586 246 aa13.78□□□□□ -0.2
VARS-220ENST00000461874 C4BPBP20851 252 aa13.78□□□□□ -0.2
VARS-220ENST00000461874 NUP62P37198 522 aaPredicted RBP13.78□□□□□ -0.2
VARS-220ENST00000461874 SNRPD3P62318 126 aaKnown RBP13.78□□□□□ -0.2
VARS-220ENST00000461874 RAB11AP62491 216 aa13.78□□□□□ -0.2
VARS-220ENST00000461874 OR8G2PQ6IF36 304 aa13.78□□□□□ -0.2
VARS-220ENST00000461874 CENPSQ8N2Z9 138 aa13.78□□□□□ -0.2
VARS-220ENST00000461874 Q8NAQ8 132 aa13.78□□□□□ -0.2
VARS-220ENST00000461874 PBDC1Q9BVG4 233 aa13.78□□□□□ -0.2
VARS-220ENST00000461874 SRRQ9GZT4 340 aa13.78□□□□□ -0.2
VARS-220ENST00000461874 PFDN2Q9UHV9 154 aa13.78□□□□□ -0.2
VARS-220ENST00000461874 CIB3Q96Q77 187 aaPredicted RBP13.77□□□□□ -0.21
VARS-220ENST00000461874 FBXL17Q9UF56 701 aa13.77□□□□□ -0.21
VARS-220ENST00000461874 FABP1P07148 127 aa13.76□□□□□ -0.21
VARS-220ENST00000461874 HOXB5P09067 269 aa13.76□□□□□ -0.21
VARS-220ENST00000461874 UBE2MP61081 183 aaKnown RBP13.76□□□□□ -0.21
VARS-220ENST00000461874 GGNBP1Q5YKI7 109 aa13.76□□□□□ -0.21
VARS-220ENST00000461874 TRGV9Q99603 122 aa13.76□□□□□ -0.21
VARS-220ENST00000461874 MAGT1Q9H0U3 335 aa13.76□□□□□ -0.21
VARS-220ENST00000461874 PAIP2BQ9ULR5 123 aaKnown RBP13.76□□□□□ -0.21
VARS-220ENST00000461874 KMT2AQ03164 3969 aa13.76□□□□□ -0.21
VARS-220ENST00000461874 ZNF705EA8MWA4 302 aaPredicted RBP13.75□□□□□ -0.21
VARS-220ENST00000461874 SNRPGP15A8MWD9 76 aa13.75□□□□□ -0.21
VARS-220ENST00000461874 SYNGR2O43760 224 aa13.75□□□□□ -0.21
VARS-220ENST00000461874 RBMY1A1P0DJD3 496 aaKnown RBP13.75□□□□□ -0.21
VARS-220ENST00000461874 RBMY1CP0DJD4 496 aa13.75□□□□□ -0.21
VARS-220ENST00000461874 MIFP14174 115 aa13.75□□□□□ -0.21
VARS-220ENST00000461874 RPP30P78346 268 aaKnown RBP13.75□□□□□ -0.21
VARS-220ENST00000461874 RBMY1FQ15415 496 aaKnown RBP13.75□□□□□ -0.21
VARS-220ENST00000461874 BAK1Q16611 211 aa13.75□□□□□ -0.21
VARS-220ENST00000461874 CSNK1G2-AS1Q8NCQ2 148 aa13.75□□□□□ -0.21
VARS-220ENST00000461874 CLEC5AQ9NY25 188 aa13.75□□□□□ -0.21
VARS-220ENST00000461874 IGKV1OR2-108A0A075B7D4 117 aa13.74□□□□□ -0.21
VARS-220ENST00000461874 IGHV4-28A0A0C4DH34 117 aa13.74□□□□□ -0.21
VARS-220ENST00000461874 H3BMM0 161 aa13.74□□□□□ -0.21
VARS-220ENST00000461874 WRBO00258 174 aa13.74□□□□□ -0.21
VARS-220ENST00000461874 LYZP61626 148 aa13.74□□□□□ -0.21
VARS-220ENST00000461874 OR2F1Q13607 317 aa13.74□□□□□ -0.21
VARS-220ENST00000461874 C1orf194Q5T5A4 169 aa13.74□□□□□ -0.21
VARS-220ENST00000461874 THAP8Q8NA92 274 aa13.74□□□□□ -0.21
VARS-220ENST00000461874 X6R8D5 127 aa13.74□□□□□ -0.21
VARS-220ENST00000461874 C9orf170A2RU37 121 aa13.73□□□□□ -0.21
VARS-220ENST00000461874 NAP1L6A6NFF2 107 aa13.73□□□□□ -0.21
VARS-220ENST00000461874 PRSS46E5RG02 174 aa13.73□□□□□ -0.21
VARS-220ENST00000461874 NDUFB6O95139 128 aa13.73□□□□□ -0.21
VARS-220ENST00000461874 NKX2-1P43699 371 aaPredicted RBP13.73□□□□□ -0.21
VARS-220ENST00000461874 INPP1P49441 399 aa13.73□□□□□ -0.21
VARS-220ENST00000461874 TRIQKQ629K1 86 aa13.73□□□□□ -0.21
VARS-220ENST00000461874 HRH4Q9H3N8 390 aa13.73□□□□□ -0.21
VARS-220ENST00000461874 TBC1D24Q9ULP9 559 aa13.73□□□□□ -0.21
VARS-220ENST00000461874 NUTF2P61970 127 aaKnown RBP13.72□□□□□ -0.21
VARS-220ENST00000461874 WDR12Q9GZL7 423 aaKnown RBP13.72□□□□□ -0.21
VARS-220ENST00000461874 ADAP1O75689 374 aa13.71□□□□□ -0.21
VARS-220ENST00000461874 HLA-DRB4P13762 266 aa13.71□□□□□ -0.21
VARS-220ENST00000461874 ID3Q02535 119 aa13.71□□□□□ -0.21
VARS-220ENST00000461874 SPANXN5Q5MJ07 72 aa13.71□□□□□ -0.21
VARS-220ENST00000461874 LGALS9CQ6DKI2 356 aa13.71□□□□□ -0.21
VARS-220ENST00000461874 C2CD4CQ8TF44 421 aa13.71□□□□□ -0.21
VARS-220ENST00000461874 SDHCQ99643 169 aaPredicted RBP13.71□□□□□ -0.21
VARS-220ENST00000461874 C1QTNF4Q9BXJ3 329 aa13.71□□□□□ -0.21
VARS-220ENST00000461874 XCL2Q9UBD3 114 aa13.71□□□□□ -0.21
VARS-220ENST00000461874 FLVCR2Q9UPI3 526 aa13.71□□□□□ -0.21
VARS-220ENST00000461874 HLA-DRB4X5D2U9 266 aa13.71□□□□□ -0.21
VARS-220ENST00000461874 ELOA3CA0A087WX78 387 aaPredicted RBP13.7□□□□□ -0.22
VARS-220ENST00000461874 SOCS3O14543 225 aa13.7□□□□□ -0.22
VARS-220ENST00000461874 CFDP00746 253 aaPredicted RBP13.7□□□□□ -0.22
VARS-220ENST00000461874 ID1P41134 155 aa13.7□□□□□ -0.22
VARS-220ENST00000461874 OR8I2Q8N0Y5 310 aa13.7□□□□□ -0.22
VARS-220ENST00000461874 PPP1R14BQ96C90 147 aa13.7□□□□□ -0.22
VARS-220ENST00000461874 STRAPQ9Y3F4 350 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms