RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 U3KQ87 197 aa11.31□□□□□ -0.6
NUP50-213ENST00000461437 SFT2D2O95562 160 aa11.3□□□□□ -0.6
NUP50-213ENST00000461437 AP3S2P59780 193 aa11.3□□□□□ -0.6
NUP50-213ENST00000461437 SRPXP78539 464 aa11.3□□□□□ -0.6
NUP50-213ENST00000461437 OR2F1Q13607 317 aa11.3□□□□□ -0.6
NUP50-213ENST00000461437 GAMTQ14353 236 aa11.3□□□□□ -0.6
NUP50-213ENST00000461437 BAK1Q16611 211 aa11.3□□□□□ -0.6
NUP50-213ENST00000461437 TMEM128Q5BJH2 165 aa11.3□□□□□ -0.6
NUP50-213ENST00000461437 GATAD1Q8WUU5 269 aa11.3□□□□□ -0.6
NUP50-213ENST00000461437 SRRQ9GZT4 340 aa11.3□□□□□ -0.6
NUP50-213ENST00000461437 ZFP92A6NM28 416 aa11.29□□□□□ -0.6
NUP50-213ENST00000461437 BUB3O43684 328 aa11.29□□□□□ -0.6
NUP50-213ENST00000461437 RNF125Q96EQ8 232 aa11.29□□□□□ -0.6
NUP50-213ENST00000461437 SLC35E1Q96K37 410 aa11.29□□□□□ -0.6
NUP50-213ENST00000461437 FLVCR2Q9UPI3 526 aa11.29□□□□□ -0.6
NUP50-213ENST00000461437 VPS13DQ5THJ4 4388 aa11.28□□□□□ -0.6
NUP50-213ENST00000461437 HELTA6NFD8 242 aa11.28□□□□□ -0.6
NUP50-213ENST00000461437 FAM90A26D6RGX4 464 aa11.28□□□□□ -0.6
NUP50-213ENST00000461437 WRBO00258 174 aa11.28□□□□□ -0.6
NUP50-213ENST00000461437 LYZP61626 148 aa11.28□□□□□ -0.6
NUP50-213ENST00000461437 SIGLEC15Q6ZMC9 328 aa11.28□□□□□ -0.6
NUP50-213ENST00000461437 NOXA1Q86UR1 476 aa11.28□□□□□ -0.6
NUP50-213ENST00000461437 CENPSQ8N2Z9 138 aa11.28□□□□□ -0.6
NUP50-213ENST00000461437 TMEM217Q8N7C4 229 aa11.28□□□□□ -0.6
NUP50-213ENST00000461437 C11orf45Q8TAV5 145 aa11.28□□□□□ -0.6
NUP50-213ENST00000461437 RAB40CQ96S21 281 aa11.28□□□□□ -0.6
NUP50-213ENST00000461437 FRAS1Q86XX4 4008 aa11.28□□□□□ -0.6
NUP50-213ENST00000461437 IGKV1OR2-108A0A075B7D4 117 aa11.27□□□□□ -0.61
NUP50-213ENST00000461437 H3BP45 60 aa11.27□□□□□ -0.61
NUP50-213ENST00000461437 ADAP1O75689 374 aa11.27□□□□□ -0.61
NUP50-213ENST00000461437 RBMY1A1P0DJD3 496 aaKnown RBP11.27□□□□□ -0.61
NUP50-213ENST00000461437 RBMY1CP0DJD4 496 aa11.27□□□□□ -0.61
NUP50-213ENST00000461437 RBMY1FQ15415 496 aaKnown RBP11.27□□□□□ -0.61
NUP50-213ENST00000461437 GGNBP1Q5YKI7 109 aa11.27□□□□□ -0.61
NUP50-213ENST00000461437 LRTM2Q8N967 370 aa11.27□□□□□ -0.61
NUP50-213ENST00000461437 Q8NAQ8 132 aa11.27□□□□□ -0.61
NUP50-213ENST00000461437 SDHCQ99643 169 aaPredicted RBP11.27□□□□□ -0.61
NUP50-213ENST00000461437 SLC25A21Q9BQT8 299 aaPredicted RBP11.27□□□□□ -0.61
NUP50-213ENST00000461437 IGHV4-28A0A0C4DH34 117 aa11.26□□□□□ -0.61
NUP50-213ENST00000461437 DUXBA0A1W2PPF3 345 aa11.26□□□□□ -0.61
NUP50-213ENST00000461437 ATF4P18848 351 aaPredicted RBP11.26□□□□□ -0.61
NUP50-213ENST00000461437 EIF2B2P49770 351 aaKnown RBP11.26□□□□□ -0.61
NUP50-213ENST00000461437 GDF5OSQ5U4N7 250 aa11.26□□□□□ -0.61
NUP50-213ENST00000461437 WDR12Q9GZL7 423 aaKnown RBP11.26□□□□□ -0.61
NUP50-213ENST00000461437 C11orf68Q9H3H3 251 aaKnown RBP11.26□□□□□ -0.61
NUP50-213ENST00000461437 NRN1Q9NPD7 142 aa11.26□□□□□ -0.61
NUP50-213ENST00000461437 CACFD1Q9UGQ2 172 aa11.26□□□□□ -0.61
NUP50-213ENST00000461437 KLK5Q9Y337 293 aaPredicted RBP11.26□□□□□ -0.61
NUP50-213ENST00000461437 DNAH10Q8IVF4 4471 aa11.26□□□□□ -0.61
NUP50-213ENST00000461437 DNAH6Q9C0G6 4158 aa11.26□□□□□ -0.61
NUP50-213ENST00000461437 DEDDO75618 318 aa11.25□□□□□ -0.61
NUP50-213ENST00000461437 IGKV3-20P01619 116 aa11.25□□□□□ -0.61
NUP50-213ENST00000461437 GATA2P23769 480 aaPredicted RBP11.25□□□□□ -0.61
NUP50-213ENST00000461437 GPX4P36969 197 aaPredicted RBP11.25□□□□□ -0.61
NUP50-213ENST00000461437 FXYD7P58549 80 aa11.25□□□□□ -0.61
NUP50-213ENST00000461437 SPANXN2Q5MJ10 180 aa11.25□□□□□ -0.61
NUP50-213ENST00000461437 TRIQKQ629K1 86 aa11.25□□□□□ -0.61
NUP50-213ENST00000461437 RPP25LQ8N5L8 163 aaKnown RBP11.25□□□□□ -0.61
NUP50-213ENST00000461437 X6R8D5 127 aa11.25□□□□□ -0.61
NUP50-213ENST00000461437 C9orf170A2RU37 121 aa11.24□□□□□ -0.61
NUP50-213ENST00000461437 PRSS46E5RG02 174 aa11.24□□□□□ -0.61
NUP50-213ENST00000461437 SYNGR2O43760 224 aa11.24□□□□□ -0.61
NUP50-213ENST00000461437 ANXA7P20073 488 aaKnown RBP11.24□□□□□ -0.61
NUP50-213ENST00000461437 INPP1P49441 399 aa11.24□□□□□ -0.61
NUP50-213ENST00000461437 AP2S1P53680 142 aaPredicted RBP11.24□□□□□ -0.61
NUP50-213ENST00000461437 UBE2MP61081 183 aaKnown RBP11.24□□□□□ -0.61
NUP50-213ENST00000461437 RAB11AP62491 216 aa11.24□□□□□ -0.61
NUP50-213ENST00000461437 SPANXN5Q5MJ07 72 aa11.24□□□□□ -0.61
NUP50-213ENST00000461437 TMEM182Q6ZP80 229 aaPredicted RBP11.24□□□□□ -0.61
NUP50-213ENST00000461437 CSNK1G2-AS1Q8NCQ2 148 aa11.24□□□□□ -0.61
NUP50-213ENST00000461437 LINC00052Q96N35 136 aa11.24□□□□□ -0.61
NUP50-213ENST00000461437 XCL2Q9UBD3 114 aa11.24□□□□□ -0.61
NUP50-213ENST00000461437 TMED3Q9Y3Q3 217 aa11.24□□□□□ -0.61
NUP50-213ENST00000461437 ELOA3CA0A087WX78 387 aaPredicted RBP11.23□□□□□ -0.61
NUP50-213ENST00000461437 CCNKO75909 580 aa11.23□□□□□ -0.61
NUP50-213ENST00000461437 NDUFB6O95139 128 aa11.23□□□□□ -0.61
NUP50-213ENST00000461437 SPP1P10451 314 aa11.23□□□□□ -0.61
NUP50-213ENST00000461437 SLC25A6P12236 298 aa11.23□□□□□ -0.61
NUP50-213ENST00000461437 BTCP35070 178 aa11.23□□□□□ -0.61
NUP50-213ENST00000461437 POLR2GP62487 172 aaKnown RBP eCLIP11.23□□□□□ -0.61
NUP50-213ENST00000461437 MORN3Q6PF18 240 aaPredicted RBP11.23□□□□□ -0.61
NUP50-213ENST00000461437 ZNF767PQ75MW2 155 aa11.23□□□□□ -0.61
NUP50-213ENST00000461437 PPP1R14BQ96C90 147 aa11.23□□□□□ -0.61
NUP50-213ENST00000461437 H3BMM0 161 aa11.22□□□□□ -0.61
NUP50-213ENST00000461437 MED6O75586 246 aa11.22□□□□□ -0.61
NUP50-213ENST00000461437 SNRPD3P62318 126 aaKnown RBP11.22□□□□□ -0.61
NUP50-213ENST00000461437 OR8G2PQ6IF36 304 aa11.22□□□□□ -0.61
NUP50-213ENST00000461437 THAP8Q8NA92 274 aa11.22□□□□□ -0.61
NUP50-213ENST00000461437 TRGV9Q99603 122 aa11.22□□□□□ -0.61
NUP50-213ENST00000461437 KRTAP17-1Q9BYP8 105 aa11.22□□□□□ -0.61
NUP50-213ENST00000461437 CELA1Q9UNI1 258 aa11.22□□□□□ -0.61
NUP50-213ENST00000461437 ZNF705EA8MWA4 302 aaPredicted RBP11.21□□□□□ -0.61
NUP50-213ENST00000461437 SNRPGP15A8MWD9 76 aa11.21□□□□□ -0.61
NUP50-213ENST00000461437 F6UB75 175 aa11.21□□□□□ -0.61
NUP50-213ENST00000461437 ZNF701M0R085 212 aaPredicted RBP11.21□□□□□ -0.61
NUP50-213ENST00000461437 SOCS3O14543 225 aa11.21□□□□□ -0.61
NUP50-213ENST00000461437 OR4E1P0C645 316 aa11.21□□□□□ -0.61
NUP50-213ENST00000461437 ATP5IP56385 69 aaPredicted RBP11.21□□□□□ -0.61
NUP50-213ENST00000461437 ACOT7LQ6ZUV0 252 aa11.21□□□□□ -0.61
NUP50-213ENST00000461437 SLC25A22Q9H936 323 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms