RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 ATP6V1FQ16864 119 aa8.54□□□□□ -1.04
SSBP1-202ENST00000461433 MGAM2Q2M2H8 2515 aa8.54□□□□□ -1.04
SSBP1-202ENST00000461433 TEPPQ6URK8 271 aa8.54□□□□□ -1.04
SSBP1-202ENST00000461433 Q8WTZ3 238 aa8.54□□□□□ -1.04
SSBP1-202ENST00000461433 TMEM147Q9BVK8 224 aa8.54□□□□□ -1.04
SSBP1-202ENST00000461433 WDR83OSQ9Y284 106 aa8.54□□□□□ -1.04
SSBP1-202ENST00000461433 APOHP02749 345 aaPredicted RBP8.53□□□□□ -1.04
SSBP1-202ENST00000461433 GATA2P23769 480 aaPredicted RBP8.53□□□□□ -1.04
SSBP1-202ENST00000461433 OR2F1Q13607 317 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 USF2Q15853 346 aaPredicted RBP8.53□□□□□ -1.04
SSBP1-202ENST00000461433 LILRB2Q8N423 598 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 AQP10Q96PS8 301 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 MGST2Q99735 147 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 UQCC1Q9NVA1 299 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 MRPL27Q9P0M9 148 aaKnown RBP8.53□□□□□ -1.04
SSBP1-202ENST00000461433 MLXQ9UH92 298 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 TNFSF18Q9UNG2 199 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 RNF222A6NCQ9 220 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 IL4P05112 153 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 CRYBB3P26998 211 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 EGFEM1PQ0D2K5 195 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 CLINT1Q14677 625 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 DEFB114Q30KQ6 69 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 BEAN1Q3B7T3 259 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 KPRPQ5T749 579 aaPredicted RBP8.53□□□□□ -1.04
SSBP1-202ENST00000461433 CYP2G1PQ6ZSU1 146 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 ZNF546Q86UE3 836 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 OR11H4Q8NGC9 324 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 OR51G1Q8NGK1 321 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 WFDC1Q9HC57 220 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 SMPXQ9UHP9 88 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 SELENOKQ9Y6D0 94 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 U3KQE9 123 aa8.53□□□□□ -1.04
SSBP1-202ENST00000461433 FXYD6-FXYD2A0A087WZ82 144 aa8.52□□□□□ -1.05
SSBP1-202ENST00000461433 IGHV7-4-1A0A0J9YVY3 117 aa8.52□□□□□ -1.05
SSBP1-202ENST00000461433 UBE2L5PA0A1B0GUS4 154 aa8.52□□□□□ -1.05
SSBP1-202ENST00000461433 CHEK1O14757 476 aa8.52□□□□□ -1.05
SSBP1-202ENST00000461433 AGPAT2O15120 278 aa8.52□□□□□ -1.05
SSBP1-202ENST00000461433 KRTAP10-11P60412 298 aa8.52□□□□□ -1.05
SSBP1-202ENST00000461433 STPG3Q8N7X2 389 aa8.52□□□□□ -1.05
SSBP1-202ENST00000461433 MARC2Q969Z3 335 aa8.52□□□□□ -1.05
SSBP1-202ENST00000461433 RNF125Q96EQ8 232 aa8.52□□□□□ -1.05
SSBP1-202ENST00000461433 GINS3Q9BRX5 216 aa8.52□□□□□ -1.05
SSBP1-202ENST00000461433 GPR61Q9BZJ8 451 aa8.52□□□□□ -1.05
SSBP1-202ENST00000461433 SMIM3Q9BZL3 60 aa8.52□□□□□ -1.05
SSBP1-202ENST00000461433 SLC45A2Q9UMX9 530 aa8.52□□□□□ -1.05
SSBP1-202ENST00000461433 IGHV3OR16-13A0A075B7E8 117 aa8.51□□□□□ -1.05
SSBP1-202ENST00000461433 IGHV3-49A0A0A0MS15 119 aa8.51□□□□□ -1.05
SSBP1-202ENST00000461433 IGHV3-74A0A0B4J1X5 117 aa8.51□□□□□ -1.05
SSBP1-202ENST00000461433 IZUMO1RA6ND01 250 aa8.51□□□□□ -1.05
SSBP1-202ENST00000461433 FABP1P07148 127 aa8.51□□□□□ -1.05
SSBP1-202ENST00000461433 LINC00869P0C866 280 aa8.51□□□□□ -1.05
SSBP1-202ENST00000461433 NPPCP23582 126 aa8.51□□□□□ -1.05
SSBP1-202ENST00000461433 BTNL8Q6UX41 500 aa8.51□□□□□ -1.05
SSBP1-202ENST00000461433 ATP5SQ99766 215 aa8.51□□□□□ -1.05
SSBP1-202ENST00000461433 RHPN1-AS1Q9BWJ2 59 aa8.51□□□□□ -1.05
SSBP1-202ENST00000461433 VSIRQ9H7M9 311 aa8.51□□□□□ -1.05
SSBP1-202ENST00000461433 FGF7P21781 194 aa8.5□□□□□ -1.05
SSBP1-202ENST00000461433 PLP1P60201 277 aa8.5□□□□□ -1.05
SSBP1-202ENST00000461433 SELENOTP62341 195 aa8.5□□□□□ -1.05
SSBP1-202ENST00000461433 CD300CQ08708 224 aa8.5□□□□□ -1.05
SSBP1-202ENST00000461433 CD300EQ496F6 205 aaPredicted RBP8.5□□□□□ -1.05
SSBP1-202ENST00000461433 TCTE3Q8IZS6 198 aa8.5□□□□□ -1.05
SSBP1-202ENST00000461433 BPIFCQ8NFQ6 507 aa8.5□□□□□ -1.05
SSBP1-202ENST00000461433 ST8SIA2Q92186 375 aa8.5□□□□□ -1.05
SSBP1-202ENST00000461433 METTL26Q96S19 204 aa8.5□□□□□ -1.05
SSBP1-202ENST00000461433 GGTLC1Q9BX51 225 aa8.5□□□□□ -1.05
SSBP1-202ENST00000461433 WDR61Q9GZS3 305 aaKnown RBP8.5□□□□□ -1.05
SSBP1-202ENST00000461433 TECRQ9NZ01 308 aaKnown RBP8.5□□□□□ -1.05
SSBP1-202ENST00000461433 FBXL17Q9UF56 701 aa8.5□□□□□ -1.05
SSBP1-202ENST00000461433 NBEAL1Q6ZS30 2694 aa8.5□□□□□ -1.05
SSBP1-202ENST00000461433 IGHV3-66A0A0C4DH42 116 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 CFDP00746 253 aaPredicted RBP8.49□□□□□ -1.05
SSBP1-202ENST00000461433 HNRNPCP07910 306 aaKnown RBP eCLIP8.49□□□□□ -1.05
SSBP1-202ENST00000461433 CAMLGP49069 296 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 LYZP61626 148 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 PRR20EP86478 221 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 PRR20CP86479 221 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 PRR20DP86480 221 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 PRR20BP86481 221 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 PRR20AP86496 221 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 FAM90A2PQ658T7 463 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 INO80EQ8NBZ0 244 aaPredicted RBP8.49□□□□□ -1.05
SSBP1-202ENST00000461433 RNF2Q99496 336 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 PBDC1Q9BVG4 233 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 DNAH3Q8TD57 4116 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 ZNF785A8K8V0 405 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 HMSDA8MTL9 139 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 ARPC5O15511 151 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 BUB3O43684 328 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 MPDU1O75352 247 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 DFFBO76075 338 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 NUP62P37198 522 aaPredicted RBP8.49□□□□□ -1.05
SSBP1-202ENST00000461433 RPL29P47914 159 aaKnown RBP8.49□□□□□ -1.05
SSBP1-202ENST00000461433 EIF2B2P49770 351 aaKnown RBP8.49□□□□□ -1.05
SSBP1-202ENST00000461433 OPCMLQ14982 345 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 MIC13Q5XKP0 118 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 PATE2Q6UY27 113 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 TMEM61Q8N0U2 210 aa8.49□□□□□ -1.05
SSBP1-202ENST00000461433 OR2K2Q8NGT1 345 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms