RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, human

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP98-208	ENST00000461047	PEMT	Q9UBM1	199 aa		4.59	□□□□□ -1.67
NUP98-208	ENST00000461047	ZMAT5	Q9UDW3	170 aa	Known RBP	4.59	□□□□□ -1.67
NUP98-208	ENST00000461047	UFC1	Q9Y3C8	167 aa		4.59	□□□□□ -1.67
NUP98-208	ENST00000461047	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	IGHV3-21	A0A0B4J1V1	117 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047		A0A0D9SG52	128 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	ZNF320	A2RRD8	509 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	C17orf112	F2Z3M2	114 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047		I3L521	148 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047		K7EIM0	57 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	TAAR5	O14804	337 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	TGOLN2	O43493	480 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	MPDU1	O75352	247 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	CST7	O76096	145 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	YIF1A	O95070	293 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	TMEM50A	O95807	157 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	RD3L	P0DJH9	198 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	LYL1	P12980	280 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	OR10J1	P30954	320 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	GPR183	P32249	361 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	RND2	P52198	227 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	MFAP2	P55001	183 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	PAX9	P55771	341 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	SELENOT	P62341	195 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	EIF5A	P63241	154 aa	Known RBP	4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	BLOC1S1	P78537	153 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	SLC38A11	Q08AI6	406 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	OR2F1	Q13607	317 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	ZNF266	Q14584	549 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	BEAN1	Q3B7T3	259 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	TCTEX1D4	Q5JR98	221 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	ACOT7L	Q6ZUV0	252 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	TMEM144	Q7Z5S9	345 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	GPHB5	Q86YW7	130 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	NPIPB3	Q92617	1050 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	HYLS1	Q96M11	299 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	RNF126	Q9BV68	326 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	TMEM231	Q9H6L2	316 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	OR5AC2	Q9NZP5	309 aa		4.58	□□□□□ -1.68
NUP98-208	ENST00000461047	JMJD1C	Q15652	2540 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	TEP1	Q99973	2627 aa	Known RBP	4.57	□□□□□ -1.68
NUP98-208	ENST00000461047		A0A1W2PS18	150 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	MFSD2B	A6NFX1	497 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	OR2T8	A6NH00	312 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	HMSD	A8MTL9	139 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	BMPR1B	O00238	502 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	NDUFA4	O00483	81 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	ARPC5	O15511	151 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	OR2C1	O95371	312 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	IGHV3-23	P01764	117 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	CD5	P06127	495 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	CTSG	P08311	255 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	HOXD3	P31249	432 aa	Predicted RBP	4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	EIF2B2	P49770	351 aa	Known RBP	4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	PTTG1IP	P53801	180 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	ELL	P55199	621 aa	Predicted RBP	4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	KRTAP10-3	P60369	221 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	YPEL3	P61236	119 aa	Predicted RBP	4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	KIAA0141	Q14154	515 aa	Predicted RBP	4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	GAMT	Q14353	236 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	PXDC1	Q5TGL8	231 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	ZNF600	Q6ZNG1	722 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047		Q6ZRG5	221 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	C19orf35	Q6ZS72	473 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	TCTE3	Q8IZS6	198 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	BPIFC	Q8NFQ6	507 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	OR5C1	Q8NGR4	320 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	MARC2	Q969Z3	335 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	GRAMD2B	Q96HH9	432 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	AQP10	Q96PS8	301 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	TRGV9	Q99603	122 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	ATP5S	Q99766	215 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	C20orf24	Q9BUV8	137 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	MFF	Q9GZY8	342 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	TMA7	Q9Y2S6	64 aa	Known RBP	4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	HSPB11	Q9Y547	144 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047		S4R3C0	116 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	CSMD1	Q96PZ7	3565 aa		4.57	□□□□□ -1.68
NUP98-208	ENST00000461047	IGHV4OR15-8	A0A075B7B6	117 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047		A0A087WW49	117 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	KANTR	A0A1W2PQU2	76 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	IGSF23	A1L1A6	192 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047		H0YIZ8	118 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047		K7EMT4	169 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	LGALS9	O00182	355 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	OVOL1	O14753	267 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	JTB	O76095	146 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	TOMM40	O96008	361 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	IGHV3-48	P01763	117 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	NPPC	P23582	126 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	CAMLG	P49069	296 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	INSL3	P51460	131 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	KLF5	Q13887	457 aa	Predicted RBP	4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	CLINT1	Q14677	625 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	ZFP69	Q49AA0	526 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	BTNL8	Q6UX41	500 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	THAP8	Q8NA92	274 aa		4.56	□□□□□ -1.68
NUP98-208	ENST00000461047	CLRN3	Q8NCR9	226 aa		4.56	□□□□□ -1.68

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