RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 IGSF10Q6WRI0 2623 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 DSCAML1Q8TD84 2053 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 HCFC1P51610 2035 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 RAI1Q7Z5J4 1906 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-202ENST00000459727 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-202ENST00000459727 A0A1B0GW15 77 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 GRIFINA4D1Z8 144 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 M0R1W7 72 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 GPX1P07203 203 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 AMTP48728 403 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 Q6AWC8 147 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 SPACA3Q8IXA5 215 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 BORCS7Q96B45 105 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 DAZAP1Q96EP5 407 aaKnown RBP7.1□□□□□ -1.27
HDAC3-202ENST00000459727 RASL11BQ9BPW5 248 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 MIEN1Q9BRT3 115 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 SCNM1Q9BWG6 230 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 RPP21Q9H633 154 aaKnown RBP7.1□□□□□ -1.27
HDAC3-202ENST00000459727 GNB4Q9HAV0 340 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 ZNRD1Q9P1U0 126 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 POLR3KQ9Y2Y1 108 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-202ENST00000459727 INTS1Q8N201 2190 aaKnown RBP7.1□□□□□ -1.27
HDAC3-202ENST00000459727 GTF3C1Q12789 2109 aa7.1□□□□□ -1.27
HDAC3-202ENST00000459727 DYSFO75923 2080 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 AKAP13Q12802 2813 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 PPIAL4CA0A0B4J2A2 164 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 PGPA6NDG6 321 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 BMPR1BO00238 502 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 LTAP01374 205 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 P01737 135 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 PPIAL4GP0DN37 164 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 GP9P14770 177 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 ORM2P19652 201 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 PMCHP20382 165 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 MFAP2P55001 183 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 HBBP68871 147 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 FXYD3Q14802 87 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 PLGLAQ15195 96 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 C10orf55Q5SWW7 151 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 TPTE2P1Q5T6R2 138 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 CCDC144NLQ6NUI1 221 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 PATE2Q6UY27 113 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 Q6ZWC4 215 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 MUC15Q8N387 334 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 C11orf42Q8N5U0 333 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 OR4F17Q8NGA8 305 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 NEU4Q8WWR8 484 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-202ENST00000459727 ZNF48Q96MX3 618 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-202ENST00000459727 TP53TG3Q9ULZ0 132 aa7.09□□□□□ -1.27
HDAC3-202ENST00000459727 TRAV5A0A0B4J249 113 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 E7EUB6 86 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 HSBP1O75506 76 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 TCRAP04437 139 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 PYYP10082 97 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 HTR1DP28221 377 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 SRIP30626 198 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 GPR6P46095 362 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-202ENST00000459727 MMDQ15546 238 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 MLANAQ16655 118 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 MRPL54Q6P161 138 aaKnown RBP7.08□□□□□ -1.28
HDAC3-202ENST00000459727 BPIFA4PQ86YQ2 179 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 KIR3DL3Q8N743 410 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 LY6G5BQ8NDX9 201 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 NUDT10Q8NFP7 164 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 OR11H6Q8NGC7 330 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 SRSF12Q8WXF0 261 aaKnown RBP7.08□□□□□ -1.28
HDAC3-202ENST00000459727 CHCHD1Q96BP2 118 aaKnown RBP7.08□□□□□ -1.28
HDAC3-202ENST00000459727 NUDT11Q96G61 164 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 MLST8Q9BVC4 326 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 C7orf69Q9H7B7 122 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 SH3BGRL2Q9UJC5 107 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 ZFP30Q9Y2G7 519 aa7.08□□□□□ -1.28
HDAC3-202ENST00000459727 TBL2Q9Y4P3 447 aaKnown RBP7.08□□□□□ -1.28
HDAC3-202ENST00000459727 KALRNO60229 2985 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 DSCAMO60469 2012 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 TET2Q6N021 2002 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-202ENST00000459727 A0A1B0GXF2 115 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 A0A1W2PS18 150 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 HIGD1CA8MV81 97 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 TEX22C9J3V5 150 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 DIRC3C9JPN6 131 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 LY6LH3BQJ8 138 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 FCN3O75636 299 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 IGLC1P0CG04 106 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 TCL1AP56279 114 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 LINC00310P59036 64 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 KRTDAPP60985 99 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 NUTF2P61970 127 aaKnown RBP7.07□□□□□ -1.28
HDAC3-202ENST00000459727 PDE6HQ13956 83 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 MRGPRG-AS1Q2M3A8 158 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 ZNF672Q499Z4 452 aaPredicted RBP7.07□□□□□ -1.28
HDAC3-202ENST00000459727 MORN5Q5VZ52 161 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 HCP5Q6MZN7 132 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 ZNF841Q6ZN19 808 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 RBPMS2Q6ZRY4 209 aaKnown RBP7.07□□□□□ -1.28
HDAC3-202ENST00000459727 C1orf122Q6ZSJ8 110 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 TMEM75Q8N9X5 138 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 NUP35Q8NFH5 326 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 NPBQ8NG41 125 aa7.07□□□□□ -1.28
HDAC3-202ENST00000459727 IGFBPL1Q8WX77 278 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms