RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 LYZP61626 148 aa13.89□□□□□ -0.19
USP39-209ENST00000458268 ZNF90Q03938 601 aa13.89□□□□□ -0.19
USP39-209ENST00000458268 AKR1C1Q04828 323 aa13.89□□□□□ -0.19
USP39-209ENST00000458268 FAM90A2PQ658T7 463 aa13.89□□□□□ -0.19
USP39-209ENST00000458268 ZBTB8BQ8NAP8 495 aaPredicted RBP13.89□□□□□ -0.19
USP39-209ENST00000458268 OR4D5Q8NGN0 318 aa13.89□□□□□ -0.19
USP39-209ENST00000458268 MITD1Q8WV92 249 aa13.89□□□□□ -0.19
USP39-209ENST00000458268 MAP6D1Q9H9H5 199 aa13.89□□□□□ -0.19
USP39-209ENST00000458268 C5orf51A6NDU8 294 aa13.88□□□□□ -0.19
USP39-209ENST00000458268 LINC00299Q6ZSB3 139 aa13.88□□□□□ -0.19
USP39-209ENST00000458268 ZNF431Q8TF32 576 aaPredicted RBP13.88□□□□□ -0.19
USP39-209ENST00000458268 PPP1R14BQ96C90 147 aa13.88□□□□□ -0.19
USP39-209ENST00000458268 RNF125Q96EQ8 232 aa13.88□□□□□ -0.19
USP39-209ENST00000458268 STAB2Q8WWQ8 2551 aa13.87□□□□□ -0.19
USP39-209ENST00000458268 UPK1BO75841 260 aa13.87□□□□□ -0.19
USP39-209ENST00000458268 CD5P06127 495 aa13.87□□□□□ -0.19
USP39-209ENST00000458268 DEFB131AP59861 70 aa13.87□□□□□ -0.19
USP39-209ENST00000458268 RRAS2P62070 204 aaPredicted RBP13.87□□□□□ -0.19
USP39-209ENST00000458268 ID3Q02535 119 aa13.87□□□□□ -0.19
USP39-209ENST00000458268 ASAH1Q13510 395 aa13.87□□□□□ -0.19
USP39-209ENST00000458268 LEMD1Q68G75 181 aa13.87□□□□□ -0.19
USP39-209ENST00000458268 ACOT7LQ6ZUV0 252 aa13.87□□□□□ -0.19
USP39-209ENST00000458268 C12orf45Q8N5I9 185 aaPredicted RBP13.87□□□□□ -0.19
USP39-209ENST00000458268 FAM24BQ8N5W8 94 aa13.87□□□□□ -0.19
USP39-209ENST00000458268 LSM5Q9Y4Y9 91 aaKnown RBP13.87□□□□□ -0.19
USP39-209ENST00000458268 FABP1P07148 127 aa13.86□□□□□ -0.19
USP39-209ENST00000458268 EIF2B2P49770 351 aaKnown RBP13.86□□□□□ -0.19
USP39-209ENST00000458268 APOC4P55056 127 aa13.86□□□□□ -0.19
USP39-209ENST00000458268 MUC7Q8TAX7 377 aa13.86□□□□□ -0.19
USP39-209ENST00000458268 BATF3Q9NR55 127 aa13.86□□□□□ -0.19
USP39-209ENST00000458268 RCL1Q9Y2P8 373 aaKnown RBP13.86□□□□□ -0.19
USP39-209ENST00000458268 HUWE1Q7Z6Z7 4374 aaKnown RBP13.86□□□□□ -0.19
USP39-209ENST00000458268 IGKV1D-37A0A075B6S9 117 aa13.85□□□□□ -0.19
USP39-209ENST00000458268 L7N2F9 121 aa13.85□□□□□ -0.19
USP39-209ENST00000458268 CCNKO75909 580 aa13.85□□□□□ -0.19
USP39-209ENST00000458268 METTL15P1P0C7V9 234 aa13.85□□□□□ -0.19
USP39-209ENST00000458268 ZNF688P0C7X2 276 aa13.85□□□□□ -0.19
USP39-209ENST00000458268 CMC4P56277 68 aaPredicted RBP13.85□□□□□ -0.19
USP39-209ENST00000458268 VAMP2P63027 116 aa13.85□□□□□ -0.19
USP39-209ENST00000458268 DEFB135Q30KP9 77 aa13.85□□□□□ -0.19
USP39-209ENST00000458268 ZFAND6Q6FIF0 208 aa13.85□□□□□ -0.19
USP39-209ENST00000458268 HELTA6NFD8 242 aa13.84□□□□□ -0.19
USP39-209ENST00000458268 C16orf54Q6UWD8 224 aa13.84□□□□□ -0.19
USP39-209ENST00000458268 STPG3Q8N7X2 389 aa13.84□□□□□ -0.19
USP39-209ENST00000458268 SNRPGP15A8MWD9 76 aa13.83□□□□□ -0.2
USP39-209ENST00000458268 MBPP02686 304 aaPredicted RBP13.83□□□□□ -0.2
USP39-209ENST00000458268 GATA2P23769 480 aaPredicted RBP13.83□□□□□ -0.2
USP39-209ENST00000458268 BCAP31P51572 246 aa13.83□□□□□ -0.2
USP39-209ENST00000458268 S100A10P60903 97 aa13.83□□□□□ -0.2
USP39-209ENST00000458268 SIGLEC15Q6ZMC9 328 aa13.83□□□□□ -0.2
USP39-209ENST00000458268 GLMPQ8WWB7 406 aa13.83□□□□□ -0.2
USP39-209ENST00000458268 SMIM8Q96KF7 97 aa13.83□□□□□ -0.2
USP39-209ENST00000458268 TRGV9Q99603 122 aa13.83□□□□□ -0.2
USP39-209ENST00000458268 NBEAL2Q6ZNJ1 2754 aa13.83□□□□□ -0.2
USP39-209ENST00000458268 IGKV1OR2-108A0A075B7D4 117 aa13.82□□□□□ -0.2
USP39-209ENST00000458268 PRSS46E5RG02 174 aa13.82□□□□□ -0.2
USP39-209ENST00000458268 LYL1P12980 280 aa13.82□□□□□ -0.2
USP39-209ENST00000458268 IFITM3Q01628 133 aa13.82□□□□□ -0.2
USP39-209ENST00000458268 GSG1LQ6UXU4 331 aa13.82□□□□□ -0.2
USP39-209ENST00000458268 RAB40CQ96S21 281 aa13.82□□□□□ -0.2
USP39-209ENST00000458268 DOK5Q9P104 306 aa13.82□□□□□ -0.2
USP39-209ENST00000458268 PFDN2Q9UHV9 154 aa13.82□□□□□ -0.2
USP39-209ENST00000458268 U3KQE9 123 aa13.82□□□□□ -0.2
USP39-209ENST00000458268 K7EQG2 157 aa13.81□□□□□ -0.2
USP39-209ENST00000458268 PAX9P55771 341 aa13.81□□□□□ -0.2
USP39-209ENST00000458268 PSMG4Q5JS54 123 aa13.81□□□□□ -0.2
USP39-209ENST00000458268 THAP8Q8NA92 274 aa13.81□□□□□ -0.2
USP39-209ENST00000458268 BPIFCQ8NFQ6 507 aa13.81□□□□□ -0.2
USP39-209ENST00000458268 EDA2RQ9HAV5 297 aa13.81□□□□□ -0.2
USP39-209ENST00000458268 MGAT4CQ9UBM8 478 aa13.81□□□□□ -0.2
USP39-209ENST00000458268 KNCNA6PVL3 124 aa13.8□□□□□ -0.2
USP39-209ENST00000458268 C3orf84H3BNL1 204 aa13.8□□□□□ -0.2
USP39-209ENST00000458268 BUB3O43684 328 aa13.8□□□□□ -0.2
USP39-209ENST00000458268 ORM2P19652 201 aa13.8□□□□□ -0.2
USP39-209ENST00000458268 AP2S1P53680 142 aaPredicted RBP13.8□□□□□ -0.2
USP39-209ENST00000458268 NRARPQ7Z6K4 114 aa13.8□□□□□ -0.2
USP39-209ENST00000458268 STHQ8IWL8 128 aa13.8□□□□□ -0.2
USP39-209ENST00000458268 OR10P1Q8NGE3 313 aa13.8□□□□□ -0.2
USP39-209ENST00000458268 OR1B1Q8NGR6 318 aa13.8□□□□□ -0.2
USP39-209ENST00000458268 OVOL2Q9BRP0 275 aa13.8□□□□□ -0.2
USP39-209ENST00000458268 SLC25A22Q9H936 323 aa13.8□□□□□ -0.2
USP39-209ENST00000458268 GPN1Q9HCN4 374 aaPredicted RBP13.8□□□□□ -0.2
USP39-209ENST00000458268 AGRNO00468 2067 aa13.79□□□□□ -0.2
USP39-209ENST00000458268 TRAV2A0A0B4J234 112 aa13.79□□□□□ -0.2
USP39-209ENST00000458268 C7orf66A4D0T2 115 aa13.79□□□□□ -0.2
USP39-209ENST00000458268 SPRY2O43597 315 aa13.79□□□□□ -0.2
USP39-209ENST00000458268 NUP62P37198 522 aaPredicted RBP13.79□□□□□ -0.2
USP39-209ENST00000458268 CAV2P51636 162 aa13.79□□□□□ -0.2
USP39-209ENST00000458268 DEFA1P59665 94 aa13.79□□□□□ -0.2
USP39-209ENST00000458268 DEFA3P59666 94 aa13.79□□□□□ -0.2
USP39-209ENST00000458268 C2orf50Q96LR7 162 aa13.79□□□□□ -0.2
USP39-209ENST00000458268 K7EPK0 472 aa13.78□□□□□ -0.2
USP39-209ENST00000458268 GOSR2O14653 212 aa13.78□□□□□ -0.2
USP39-209ENST00000458268 TSC22D2O75157 780 aa13.78□□□□□ -0.2
USP39-209ENST00000458268 CA1P00915 261 aaPredicted RBP13.78□□□□□ -0.2
USP39-209ENST00000458268 IL5P05113 134 aa13.78□□□□□ -0.2
USP39-209ENST00000458268 TMEM14EPQ6UXP3 125 aa13.78□□□□□ -0.2
USP39-209ENST00000458268 TMEM182Q6ZP80 229 aaPredicted RBP13.78□□□□□ -0.2
USP39-209ENST00000458268 OR8I2Q8N0Y5 310 aa13.78□□□□□ -0.2
USP39-209ENST00000458268 DCANP1Q8TF63 244 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms