RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SHANK2-AS3Q9BTD1 123 aa2.43□□□□□ -2.02
HMGB1P15-201ENST00000453854 WDR61Q9GZS3 305 aaKnown RBP2.43□□□□□ -2.02
HMGB1P15-201ENST00000453854 TMEM126AQ9H061 195 aa2.43□□□□□ -2.02
HMGB1P15-201ENST00000453854 VCXQ9H320 206 aa2.43□□□□□ -2.02
HMGB1P15-201ENST00000453854 ZNF286AQ9HBT8 521 aa2.43□□□□□ -2.02
HMGB1P15-201ENST00000453854 C21orf62Q9NYP8 219 aa2.43□□□□□ -2.02
HMGB1P15-201ENST00000453854 COPZ2Q9P299 210 aa2.43□□□□□ -2.02
HMGB1P15-201ENST00000453854 KLK5Q9Y337 293 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P15-201ENST00000453854 ASB4Q9Y574 426 aa2.43□□□□□ -2.02
HMGB1P15-201ENST00000453854 NACAE9PAV3 2078 aa2.43□□□□□ -2.02
HMGB1P15-201ENST00000453854 DSCAML1Q8TD84 2053 aa2.43□□□□□ -2.02
HMGB1P15-201ENST00000453854 ACACAQ13085 2346 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 PTPRBP23467 1997 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 TRBV20OR9-2A0A075B6H5 130 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 TRAV9-1A0A075B6T8 112 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 TRBV6-6A0A0A6YYG2 114 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 IGHV3-21A0A0B4J1V1 117 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 IGHV1-3A0A0C4DH29 117 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 DPRXA6NFQ7 191 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 J3QKU1 62 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 K7EP13 123 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 IFNA10P01566 189 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 APOC1P02654 83 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 CSN2P05814 226 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 COX4I1P13073 169 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 ZNF823P16415 610 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 OPRK1P41145 380 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 SERPINB10P48595 397 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 CCR6P51684 374 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 EMP1P54849 157 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 ENDOGQ14249 297 aaKnown RBP2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 PDGFRLQ15198 375 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 WHAMMP3Q1A5X7 153 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 WDR59Q6PJI9 974 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 Q6Q795 121 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 AGTRAPQ6RW13 159 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 AMN1Q8IY45 258 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 ST6GALNAC3Q8NDV1 305 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 OR9A2Q8NGT5 310 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 SGMS2Q8NHU3 365 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 SLC25A46Q96AG3 418 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 TOMM6Q96B49 74 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 IGF2BP2-AS1Q96M15 143 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 CCDC115Q96NT0 180 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 C1orf50Q9BV19 199 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 RTL8AQ9BWD3 113 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 IMUPQ9GZP8 106 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 FAM60AQ9NP50 221 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 LHX9Q9NQ69 397 aa2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 UBR5O95071 2799 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P15-201ENST00000453854 UTP20O75691 2785 aaKnown RBP2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 POLQO75417 2590 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 A0A087WX48 190 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 TRAV38-1A0A0B4J264 116 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 IGKV1-12A0A0C4DH73 117 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 IGLL5B9A064 214 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 TRAPPC2LH3BP13 241 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 RBFOX2O43251 390 aaKnown RBP eCLIP2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 IGKV1D-12P01611 117 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 SRP19P09132 144 aaKnown RBP2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 ZNF32P17041 273 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 S100A2P29034 98 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 ATP5G3P48201 142 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 PSMD8P48556 350 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 CMC4P56277 68 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 CKS1BP61024 79 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 ELF3P78545 371 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 PSG9Q00887 426 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 SYCNQ0VAF6 134 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 HTR4Q13639 388 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 SP6Q3SY56 376 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 LYRM7Q5U5X0 104 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 ZFP1Q6P2D0 407 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 WDR86Q86TI4 376 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 H1FOOQ8IZA3 346 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 ZNF283Q8N7M2 679 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 OR5A1Q8NGJ0 315 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 OR13C4Q8NGS5 318 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 OR4A5Q8NH83 315 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 LINC01560Q8TB33 94 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 RAB2BQ8WUD1 216 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 ITLN2Q8WWU7 325 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 DNAJC9Q8WXX5 260 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 ACOT12Q8WYK0 555 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 MAL2Q969L2 176 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 L3HYPDHQ96EM0 354 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 ADAT3Q96EY9 351 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 LAMTOR2Q9Y2Q5 125 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 COL6A6A6NMZ7 2263 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 APC2O95996 2303 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 CCDC171Q6TFL3 1326 aa2.41□□□□□ -2.02
HMGB1P15-201ENST00000453854 MYH6P13533 1939 aa2.4□□□□□ -2.02
HMGB1P15-201ENST00000453854 ANKRD12Q6UB98 2062 aa2.4□□□□□ -2.02
HMGB1P15-201ENST00000453854 ZNF106Q9H2Y7 1883 aaKnown RBP2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 TRAV36DV7A0A075B6V5 113 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 TMEM189A5PLL7 270 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 C9JCJ5 164 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 TPST1O60507 370 aa2.4□□□□□ -2.03
HMGB1P15-201ENST00000453854 CCNKO75909 580 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms