RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 STAG3L2P0CL84 134 aa9.09□□□□□ -0.95
DDR1-239ENST00000452441 STAG3L3P0CL85 134 aa9.09□□□□□ -0.95
DDR1-239ENST00000452441 AREGP15514 252 aa9.09□□□□□ -0.95
DDR1-239ENST00000452441 APOBEC3AP31941 199 aaPredicted RBP9.09□□□□□ -0.95
DDR1-239ENST00000452441 HINT1P49773 126 aaPredicted RBP9.09□□□□□ -0.95
DDR1-239ENST00000452441 WFDC3Q8IUB2 231 aa9.09□□□□□ -0.95
DDR1-239ENST00000452441 ZNF207O43670 478 aaKnown RBP9.08□□□□□ -0.96
DDR1-239ENST00000452441 LY6EQ16553 131 aa9.08□□□□□ -0.96
DDR1-239ENST00000452441 C17orf58Q2M2W7 97 aa9.08□□□□□ -0.96
DDR1-239ENST00000452441 GOLT1AQ6ZVE7 132 aa9.08□□□□□ -0.96
DDR1-239ENST00000452441 RNF2Q99496 336 aa9.08□□□□□ -0.96
DDR1-239ENST00000452441 MPDU1O75352 247 aa9.08□□□□□ -0.96
DDR1-239ENST00000452441 P0C879 139 aa9.08□□□□□ -0.96
DDR1-239ENST00000452441 FCGR2BP31994 310 aaPredicted RBP9.08□□□□□ -0.96
DDR1-239ENST00000452441 ZNF124Q15973 351 aa9.08□□□□□ -0.96
DDR1-239ENST00000452441 LBHQ53QV2 105 aaPredicted RBP9.08□□□□□ -0.96
DDR1-239ENST00000452441 OR4C13Q8NGP0 309 aa9.08□□□□□ -0.96
DDR1-239ENST00000452441 DEFB104AQ8WTQ1 72 aa9.08□□□□□ -0.96
DDR1-239ENST00000452441 SNHG12Q9BXW3 62 aa9.08□□□□□ -0.96
DDR1-239ENST00000452441 TBL2Q9Y4P3 447 aaKnown RBP9.08□□□□□ -0.96
DDR1-239ENST00000452441 A0A1W2PN81 502 aa9.08□□□□□ -0.96
DDR1-239ENST00000452441 UPK2O00526 184 aa9.08□□□□□ -0.96
DDR1-239ENST00000452441 VSTM2AQ8TAG5 236 aa9.08□□□□□ -0.96
DDR1-239ENST00000452441 E7EQL1 145 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 TYMSP04818 313 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 PDLIM4P50479 330 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 SSX8Q7RTT4 187 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 EXOC3-AS1Q8N2X6 119 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 RITA1Q96K30 269 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 ELOVL5Q9NYP7 299 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 RPUSD1Q9UJJ7 312 aaKnown RBP9.07□□□□□ -0.96
DDR1-239ENST00000452441 POLR3KQ9Y2Y1 108 aaPredicted RBP9.07□□□□□ -0.96
DDR1-239ENST00000452441 WASHC3Q9Y3C0 194 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 M0R143 59 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 CORTO00230 105 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 LOXL3P58215 753 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 NUTF2P61970 127 aaKnown RBP9.07□□□□□ -0.96
DDR1-239ENST00000452441 RASL11BQ9BPW5 248 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 HNRNPA3P51991 378 aaKnown RBP9.07□□□□□ -0.96
DDR1-239ENST00000452441 RPL15P61313 204 aaKnown RBP9.07□□□□□ -0.96
DDR1-239ENST00000452441 RNF151Q2KHN1 245 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 TMEM177Q53S58 311 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 FAM168AQ92567 244 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 HIF1ANQ9NWT6 349 aa9.07□□□□□ -0.96
DDR1-239ENST00000452441 TET2Q6N021 2002 aaPredicted RBP9.07□□□□□ -0.96
DDR1-239ENST00000452441 ISLRO14498 428 aa9.06□□□□□ -0.96
DDR1-239ENST00000452441 P01737 135 aa9.06□□□□□ -0.96
DDR1-239ENST00000452441 HTR1DP28221 377 aa9.06□□□□□ -0.96
DDR1-239ENST00000452441 TCTEX1D1Q8N7M0 179 aa9.06□□□□□ -0.96
DDR1-239ENST00000452441 LINC00312Q9Y6C7 94 aa9.06□□□□□ -0.96
DDR1-239ENST00000452441 IGFL2Q6UWQ7 119 aa9.06□□□□□ -0.96
DDR1-239ENST00000452441 BEND2Q8NDZ0 799 aa9.06□□□□□ -0.96
DDR1-239ENST00000452441 GNG7O60262 68 aa9.06□□□□□ -0.96
DDR1-239ENST00000452441 ZNF788Q6ZQV5 615 aa9.06□□□□□ -0.96
DDR1-239ENST00000452441 MAPK1IP1LQ8NDC0 245 aa9.06□□□□□ -0.96
DDR1-239ENST00000452441 IL36BQ9NZH7 164 aa9.06□□□□□ -0.96
DDR1-239ENST00000452441 FOXA2Q9Y261 457 aaPredicted RBP9.06□□□□□ -0.96
DDR1-239ENST00000452441 HIGD1CA8MV81 97 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 TMEM178BH3BS89 294 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 HYPMO75409 117 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 AMY1AP04745 511 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 BRS3P32247 399 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 KLRB1Q12918 225 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 CHODLQ9H9P2 273 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 B9A039 149 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 NBEAP1P0C6P0 100 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 FOXL1Q12952 345 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 TMEM183BQ1AE95 376 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 VWC2Q2TAL6 325 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 TMEM144Q7Z5S9 345 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 Q8N7P7 452 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 DSCAML1Q8TD84 2053 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 IGKV1OR2-108A0A075B7D4 117 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 K7EN84 100 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 VDAC2P45880 294 aaPredicted RBP9.05□□□□□ -0.96
DDR1-239ENST00000452441 EIF4EBP1Q13541 118 aaPredicted RBP9.05□□□□□ -0.96
DDR1-239ENST00000452441 SPATA45Q537H7 98 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 IGFL3Q6UXB1 125 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 DIRC2Q96SL1 478 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 CSMD1Q96PZ7 3565 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 CLEC3BP05452 202 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 CD99P14209 185 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 CEACAM8P31997 349 aaPredicted RBP9.05□□□□□ -0.96
DDR1-239ENST00000452441 PERPQ96FX8 193 aa9.05□□□□□ -0.96
DDR1-239ENST00000452441 GGTLC3B5MD39 225 aa9.04□□□□□ -0.96
DDR1-239ENST00000452441 HSBP1L1C9JCN9 74 aa9.04□□□□□ -0.96
DDR1-239ENST00000452441 IL4P05112 153 aa9.04□□□□□ -0.96
DDR1-239ENST00000452441 CT45A10P0DMU9 189 aa9.04□□□□□ -0.96
DDR1-239ENST00000452441 GNLYP22749 145 aa9.04□□□□□ -0.96
DDR1-239ENST00000452441 CD69Q07108 199 aa9.04□□□□□ -0.96
DDR1-239ENST00000452441 SRSF12Q8WXF0 261 aaKnown RBP9.04□□□□□ -0.96
DDR1-239ENST00000452441 SVEP1Q4LDE5 3571 aa9.04□□□□□ -0.96
DDR1-239ENST00000452441 PAX1P15863 534 aa9.04□□□□□ -0.96
DDR1-239ENST00000452441 PPIFP30405 207 aaKnown RBP9.04□□□□□ -0.96
DDR1-239ENST00000452441 UQCRFS1P47985 274 aa9.04□□□□□ -0.96
DDR1-239ENST00000452441 ZNF672Q499Z4 452 aaPredicted RBP9.04□□□□□ -0.96
DDR1-239ENST00000452441 C1orf194Q5T5A4 169 aa9.04□□□□□ -0.96
DDR1-239ENST00000452441 CIARTQ8N365 385 aaPredicted RBP9.04□□□□□ -0.96
DDR1-239ENST00000452441 RNF24Q9Y225 148 aa9.04□□□□□ -0.96
DDR1-239ENST00000452441 PRCDQ00LT1 54 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms