RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SPP1P10451 314 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 ZP3P21754 424 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 ATP6V0CP27449 155 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 ADMP35318 185 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 CAMLGP49069 296 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 SELENOTP62341 195 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 SERF2P84101 59 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 TEX261Q6UWH6 196 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 DLX4Q92988 240 aaPredicted RBP9.99□□□□□ -0.81
VPS33A-202ENST00000451053 TRGV9Q99603 122 aa9.99□□□□□ -0.81
VPS33A-202ENST00000451053 IGHV3-35A0A0C4DH35 117 aa9.98□□□□□ -0.81
VPS33A-202ENST00000451053 AGPAT2O15120 278 aa9.98□□□□□ -0.81
VPS33A-202ENST00000451053 GGCTO75223 188 aaKnown RBP9.98□□□□□ -0.81
VPS33A-202ENST00000451053 CTSGP08311 255 aa9.98□□□□□ -0.81
VPS33A-202ENST00000451053 OR10J1P30954 320 aa9.98□□□□□ -0.81
VPS33A-202ENST00000451053 RPEL1Q2QD12 228 aa9.98□□□□□ -0.81
VPS33A-202ENST00000451053 OR2G3Q8NGZ4 309 aa9.98□□□□□ -0.81
VPS33A-202ENST00000451053 GGTLC1Q9BX51 225 aa9.98□□□□□ -0.81
VPS33A-202ENST00000451053 SLC25A32Q9H2D1 315 aa9.98□□□□□ -0.81
VPS33A-202ENST00000451053 UMAD1C9J7I0 102 aa9.97□□□□□ -0.81
VPS33A-202ENST00000451053 CFDP00746 253 aaPredicted RBP9.97□□□□□ -0.81
VPS33A-202ENST00000451053 MBP02144 154 aa9.97□□□□□ -0.81
VPS33A-202ENST00000451053 CD33P20138 364 aa9.97□□□□□ -0.81
VPS33A-202ENST00000451053 RPL29P47914 159 aaKnown RBP9.97□□□□□ -0.81
VPS33A-202ENST00000451053 SYNJ2BPP57105 145 aa9.97□□□□□ -0.81
VPS33A-202ENST00000451053 KLF5Q13887 457 aaPredicted RBP9.97□□□□□ -0.81
VPS33A-202ENST00000451053 SPSB3Q6PJ21 355 aa9.97□□□□□ -0.81
VPS33A-202ENST00000451053 CYP2G1PQ6ZSU1 146 aa9.97□□□□□ -0.81
VPS33A-202ENST00000451053 ZNF767PQ75MW2 155 aa9.97□□□□□ -0.81
VPS33A-202ENST00000451053 WFDC9Q8NEX5 89 aa9.97□□□□□ -0.81
VPS33A-202ENST00000451053 TMED6Q8WW62 240 aa9.97□□□□□ -0.81
VPS33A-202ENST00000451053 ZNF414Q96IQ9 312 aa9.97□□□□□ -0.81
VPS33A-202ENST00000451053 MGST2Q99735 147 aa9.97□□□□□ -0.81
VPS33A-202ENST00000451053 RSG1Q9BU20 258 aa9.97□□□□□ -0.81
VPS33A-202ENST00000451053 IGKV1OR2-108A0A075B7D4 117 aa9.96□□□□□ -0.82
VPS33A-202ENST00000451053 OVOL1O14753 267 aa9.96□□□□□ -0.82
VPS33A-202ENST00000451053 NUPL2O15504 423 aaKnown RBP9.96□□□□□ -0.82
VPS33A-202ENST00000451053 IGLC1P0CG04 106 aa9.96□□□□□ -0.82
VPS33A-202ENST00000451053 RAB5CP51148 216 aa9.96□□□□□ -0.82
VPS33A-202ENST00000451053 AKR1C8PQ5T2L2 129 aa9.96□□□□□ -0.82
VPS33A-202ENST00000451053 C1QL4Q86Z23 238 aa9.96□□□□□ -0.82
VPS33A-202ENST00000451053 ZNF680Q8NEM1 530 aa9.96□□□□□ -0.82
VPS33A-202ENST00000451053 LRRC20Q8TCA0 184 aa9.96□□□□□ -0.82
VPS33A-202ENST00000451053 SH3BGRL3Q9H299 93 aa9.96□□□□□ -0.82
VPS33A-202ENST00000451053 UBQLN2Q9UHD9 624 aa9.96□□□□□ -0.82
VPS33A-202ENST00000451053 SLC45A2Q9UMX9 530 aa9.96□□□□□ -0.82
VPS33A-202ENST00000451053 IGKV1D-37A0A075B6S9 117 aa9.95□□□□□ -0.82
VPS33A-202ENST00000451053 IGKV1-17P01599 117 aa9.95□□□□□ -0.82
VPS33A-202ENST00000451053 YPEL3P61236 119 aaPredicted RBP9.95□□□□□ -0.82
VPS33A-202ENST00000451053 TIGITQ495A1 244 aa9.95□□□□□ -0.82
VPS33A-202ENST00000451053 PXDC1Q5TGL8 231 aa9.95□□□□□ -0.82
VPS33A-202ENST00000451053 ALKAL2Q6UX46 152 aa9.95□□□□□ -0.82
VPS33A-202ENST00000451053 UNQ9165/PRO28630Q6UXU0 137 aa9.95□□□□□ -0.82
VPS33A-202ENST00000451053 Q6ZRG5 221 aa9.95□□□□□ -0.82
VPS33A-202ENST00000451053 GPHB5Q86YW7 130 aa9.95□□□□□ -0.82
VPS33A-202ENST00000451053 STPG3Q8N7X2 389 aa9.95□□□□□ -0.82
VPS33A-202ENST00000451053 BPIFCQ8NFQ6 507 aa9.95□□□□□ -0.82
VPS33A-202ENST00000451053 SLC39A9Q9NUM3 307 aa9.95□□□□□ -0.82
VPS33A-202ENST00000451053 PXMP4Q9Y6I8 212 aa9.95□□□□□ -0.82
VPS33A-202ENST00000451053 WNK1Q9H4A3 2382 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 IGHV3OR16-8A0A075B7F1 116 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 TOMM40O96008 361 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 IGLL1P15814 213 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 B2MP61769 119 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 PRR20EP86478 221 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 PRR20CP86479 221 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 PRR20DP86480 221 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 PRR20BP86481 221 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 PRR20AP86496 221 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 RELQ04864 619 aaPredicted RBP9.94□□□□□ -0.82
VPS33A-202ENST00000451053 ACOT6Q3I5F7 207 aaPredicted RBP9.94□□□□□ -0.82
VPS33A-202ENST00000451053 FFAR4Q5NUL3 377 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 DPPA3Q6W0C5 159 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 TMEM182Q6ZP80 229 aaPredicted RBP9.94□□□□□ -0.82
VPS33A-202ENST00000451053 REC114Q7Z4M0 266 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 Q8WTZ3 238 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 RNF141Q8WVD5 230 aa9.94□□□□□ -0.82
VPS33A-202ENST00000451053 TRRAPQ9Y4A5 3859 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 ZNF320A2RRD8 509 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 LGALS9O00182 355 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 NDUFA4O00483 81 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 RGS13O14921 159 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 LINC00869P0C866 280 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 RD3LP0DJH9 198 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 EDN2P20800 178 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 S100A7P31151 101 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 SULT1A2P50226 295 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 ELLP55199 621 aaPredicted RBP9.93□□□□□ -0.82
VPS33A-202ENST00000451053 IFITM2Q01629 132 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 ZNF90Q03938 601 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 FAM106AQ4KMX7 169 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 TMEM41BQ5BJD5 291 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 MIC13Q5XKP0 118 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 IL34Q6ZMJ4 242 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 ZNF600Q6ZNG1 722 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 S100A7AQ86SG5 101 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 OR51G1Q8NGK1 321 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 OR9G4Q8NGQ1 327 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 OR1L4Q8NGR5 311 aa9.93□□□□□ -0.82
VPS33A-202ENST00000451053 TMEM190Q8WZ59 177 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms