RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 AMTNQ6UX39 209 aa5.21□□□□□ -1.58
LINC01961-201ENST00000449954 TMEM144Q7Z5S9 345 aa5.21□□□□□ -1.58
LINC01961-201ENST00000449954 TMEM263Q8WUH6 116 aaKnown RBP5.21□□□□□ -1.58
LINC01961-201ENST00000449954 TSC22D3Q99576 134 aa5.21□□□□□ -1.58
LINC01961-201ENST00000449954 DNAJC4Q9NNZ3 241 aa5.21□□□□□ -1.58
LINC01961-201ENST00000449954 NOP10Q9NPE3 64 aaKnown RBP5.21□□□□□ -1.58
LINC01961-201ENST00000449954 DOK5Q9P104 306 aa5.21□□□□□ -1.58
LINC01961-201ENST00000449954 CACNG5Q9UF02 275 aa5.21□□□□□ -1.58
LINC01961-201ENST00000449954 ZNF98A6NK75 572 aa5.2□□□□□ -1.58
LINC01961-201ENST00000449954 CORTO00230 105 aa5.2□□□□□ -1.58
LINC01961-201ENST00000449954 CRXO43186 299 aaPredicted RBP5.2□□□□□ -1.58
LINC01961-201ENST00000449954 BUB3O43684 328 aa5.2□□□□□ -1.58
LINC01961-201ENST00000449954 CD1AP06126 327 aa5.2□□□□□ -1.58
LINC01961-201ENST00000449954 MYL12AP19105 171 aa5.2□□□□□ -1.58
LINC01961-201ENST00000449954 GADD45AP24522 165 aa5.2□□□□□ -1.58
LINC01961-201ENST00000449954 ZFP41Q8N8Y5 198 aa5.2□□□□□ -1.58
LINC01961-201ENST00000449954 RNASE8Q8TDE3 154 aaKnown RBP5.2□□□□□ -1.58
LINC01961-201ENST00000449954 VSIG2Q96IQ7 327 aa5.2□□□□□ -1.58
LINC01961-201ENST00000449954 RPRMQ9NS64 109 aa5.2□□□□□ -1.58
LINC01961-201ENST00000449954 ORC6Q9Y5N6 252 aa5.2□□□□□ -1.58
LINC01961-201ENST00000449954 ICOSQ9Y6W8 199 aa5.2□□□□□ -1.58
LINC01961-201ENST00000449954 IGKV1D-8A0A087WSZ0 117 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 TRAV30A0A087WSZ9 112 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 F6UB75 175 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 SLC17A2O00624 439 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 ISLRO14498 428 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 RLN2P04090 185 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 CRYGDP07320 174 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 HIST1H1DP16402 221 aaKnown RBP5.19□□□□□ -1.58
LINC01961-201ENST00000449954 ERHP84090 104 aaKnown RBP5.19□□□□□ -1.58
LINC01961-201ENST00000449954 SPINK13Q1W4C9 94 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 GPR141Q7Z602 305 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 OR4X1Q8NH49 305 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 LGALS14Q8TCE9 139 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 Q8WTZ3 238 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 TMEM37Q8WXS4 190 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 PLGRKTQ9HBL7 147 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 DAPK2Q9UIK4 370 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 ARL2BPQ9Y2Y0 163 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 NSG2Q9Y328 171 aa5.19□□□□□ -1.58
LINC01961-201ENST00000449954 PNMA8CA0A1B0GUJ8 204 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 IRGMA1A4Y4 181 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 M0R2Z0 102 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 SOCS3O14543 225 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 GAGE7O76087 117 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 IGKV1-17P01599 117 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 GAGE12FP0CL80 117 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 GAGE12GP0CL81 117 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 GAGE12IP0CL82 117 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 FOXI1Q12951 378 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 ARL6IP1Q15041 203 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 AADACL3Q5VUY0 350 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 CNIH2Q6PI25 160 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 BAP18Q8IXM2 172 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 HSD17B11Q8NBQ5 300 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 BPIFB6Q8NFQ5 453 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 OR11H7Q8NGC8 314 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 OR51H1Q8NH63 302 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 RHOXF1Q8NHV9 184 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 SECTM1Q8WVN6 248 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 LINC01587Q99440 93 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 PAXXQ9BUH6 204 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 WDR12Q9GZL7 423 aaKnown RBP5.18□□□□□ -1.58
LINC01961-201ENST00000449954 DPH3P1Q9H4G8 78 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 CCL28Q9NRJ3 127 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 KLK11Q9UBX7 282 aa5.18□□□□□ -1.58
LINC01961-201ENST00000449954 DUSP14O95147 198 aaKnown RBP5.17□□□□□ -1.58
LINC01961-201ENST00000449954 KRASP01116 189 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 IL4P05112 153 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 FCGR1AP12314 374 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 ELK1P19419 428 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 SNCAP37840 140 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 BLOC1S1P78537 153 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 HSD17B12Q53GQ0 312 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 LYPD5Q6UWN5 251 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 WFDC10BQ8IUB3 73 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 ZNF485Q8NCK3 441 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 OR10R2Q8NGX6 335 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 SVIPQ8NHG7 77 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 BORCS5Q969J3 196 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 GPR146Q96CH1 333 aa5.17□□□□□ -1.58
LINC01961-201ENST00000449954 DIMT1Q9UNQ2 313 aaKnown RBP5.17□□□□□ -1.58
LINC01961-201ENST00000449954 A0A075B6Q4 140 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 BOLA2-SMG1P6H3BVE0 249 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 ALPLP05186 524 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 FCER2P06734 321 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 HTN1P15515 57 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 CALB2P22676 271 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 OPRK1P41145 380 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 MEOX2P50222 304 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 CNN1P51911 297 aaKnown RBP5.16□□□□□ -1.58
LINC01961-201ENST00000449954 YPEL3P61236 119 aaPredicted RBP5.16□□□□□ -1.58
LINC01961-201ENST00000449954 CD300CQ08708 224 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 TIGITQ495A1 244 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 AMIGO2Q86SJ2 522 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 TSPAN14Q8NG11 270 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 OR1S2Q8NGQ3 325 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 OR6F1Q8NGZ6 308 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 FAM3DQ96BQ1 224 aa5.16□□□□□ -1.58
LINC01961-201ENST00000449954 RAB22AQ9UL26 194 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms