RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 NKX2-5P52952 324 aaPredicted RBP10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 MFAP4P55083 255 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 LILRB2Q8N423 598 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 OR1S2Q8NGQ3 325 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 ZNF414Q96IQ9 312 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 SLC35E1Q96K37 410 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 CHRDL1Q9BU40 450 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 MFFQ9GZY8 342 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 GAR1Q9NY12 217 aaKnown RBP10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 FBXL17Q9UF56 701 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 RYR2Q92736 4967 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 IGKV1D-37A0A075B6S9 117 aa10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 IGKV1OR2-108A0A075B7D4 117 aa10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 TRBV7-1A0A0A6YYK4 115 aa10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 BOLA2-SMG1P6H3BVE0 249 aa10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 BMPR1BO00238 502 aa10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 AKR1C1Q04828 323 aa10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 TIGITQ495A1 244 aa10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 ZFP69Q49AA0 526 aa10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 ETFRF1Q6IPR1 90 aa10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 LINC00322Q6ZN03 302 aaPredicted RBP10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 INO80EQ8NBZ0 244 aaPredicted RBP10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 OR4X1Q8NH49 305 aa10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 CACNG8Q8WXS5 425 aa10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 TMEM147Q9BVK8 224 aa10.36□□□□□ -0.75
PDLIM2-213ENST00000448520 DNAH1Q9P2D7 4330 aa10.35□□□□□ -0.75
PDLIM2-213ENST00000448520 IZUMO1RA6ND01 250 aa10.35□□□□□ -0.75
PDLIM2-213ENST00000448520 GNG7O60262 68 aa10.35□□□□□ -0.75
PDLIM2-213ENST00000448520 CLN5O75503 358 aa10.35□□□□□ -0.75
PDLIM2-213ENST00000448520 CTSGP08311 255 aa10.35□□□□□ -0.75
PDLIM2-213ENST00000448520 IGLC1P0CG04 106 aa10.35□□□□□ -0.75
PDLIM2-213ENST00000448520 ARL3P36405 182 aa10.35□□□□□ -0.75
PDLIM2-213ENST00000448520 NUP62P37198 522 aaPredicted RBP10.35□□□□□ -0.75
PDLIM2-213ENST00000448520 HBG1P69891 147 aa10.35□□□□□ -0.75
PDLIM2-213ENST00000448520 HBG2P69892 147 aa10.35□□□□□ -0.75
PDLIM2-213ENST00000448520 BAXQ07812 192 aa10.35□□□□□ -0.75
PDLIM2-213ENST00000448520 TMEM116Q8NCL8 245 aa10.35□□□□□ -0.75
PDLIM2-213ENST00000448520 STARD9Q9P2P6 4700 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 IGHV3OR16-8A0A075B7F1 116 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 HMSDA8MTL9 139 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 TGOLN2O43493 480 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 JTBO76095 146 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 OR2C1O95371 312 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 IGKV1-17P01599 117 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 OR10J1P30954 320 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 S100A11P31949 105 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 ZNF90Q03938 601 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 OR2F1Q13607 317 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 VWC2Q2TAL6 325 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 LGALSLQ3ZCW2 172 aaPredicted RBP10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 CD300EQ496F6 205 aaPredicted RBP10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 ADAMTSL5Q6ZMM2 481 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 TMEM182Q6ZP80 229 aaPredicted RBP10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 UQCC1Q9NVA1 299 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 TECRQ9NZ01 308 aaKnown RBP10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 RFNGQ9Y644 331 aa10.34□□□□□ -0.75
PDLIM2-213ENST00000448520 ZFP92A6NM28 416 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 ZNF785A8K8V0 405 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 GGCTO75223 188 aaKnown RBP10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 FGF7P21781 194 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 GATA2P23769 480 aaPredicted RBP10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 FCGR2BP31994 310 aaPredicted RBP10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 NPBWR1P48145 328 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 CD81P60033 236 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 DEFB114Q30KQ6 69 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 LAMTOR1Q6IAA8 161 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 TMEM144Q7Z5S9 345 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 KCNRGQ8N5I3 272 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 THAP8Q8NA92 274 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 DYNLRB2Q8TF09 96 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 HYLS1Q96M11 299 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 MGST2Q99735 147 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 TXN2Q99757 166 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 ATP5SQ99766 215 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 WDR83OSQ9Y284 106 aa10.33□□□□□ -0.76
PDLIM2-213ENST00000448520 LGALS9O00182 355 aa10.32□□□□□ -0.76
PDLIM2-213ENST00000448520 NUPL2O15504 423 aaKnown RBP10.32□□□□□ -0.76
PDLIM2-213ENST00000448520 ATP6V1FQ16864 119 aa10.32□□□□□ -0.76
PDLIM2-213ENST00000448520 TMUB2Q71RG4 321 aa10.32□□□□□ -0.76
PDLIM2-213ENST00000448520 C9orf62Q8N4C0 152 aa10.32□□□□□ -0.76
PDLIM2-213ENST00000448520 GGACTQ9BVM4 153 aa10.32□□□□□ -0.76
PDLIM2-213ENST00000448520 NPVFQ9HCQ7 196 aa10.32□□□□□ -0.76
PDLIM2-213ENST00000448520 BOLA1Q9Y3E2 137 aa10.32□□□□□ -0.76
PDLIM2-213ENST00000448520 C2orf70A6NJV1 201 aa10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 OR11H12B2RN74 326 aa10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 FNDC10F2Z333 226 aa10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 SCAF4O95104 1147 aaKnown RBP10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 FOLR2P14207 255 aa10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 EDN2P20800 178 aa10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 ZNF345Q14585 488 aa10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 RPL7L1Q6DKI1 246 aaKnown RBP10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 BTNL8Q6UX41 500 aa10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 UNQ9165/PRO28630Q6UXU0 137 aa10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 GPHB5Q86YW7 130 aa10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 TRGV9Q99603 122 aa10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 ARL6Q9H0F7 186 aa10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 CYTL1Q9NRR1 136 aa10.31□□□□□ -0.76
PDLIM2-213ENST00000448520 RBMY1BA6NDE4 496 aaKnown RBP10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 RBMY1EA6NEQ0 496 aaKnown RBP10.3□□□□□ -0.76
PDLIM2-213ENST00000448520 AGPAT2O15120 278 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 343.6 ms